BAC Information

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BAC

Clone NameB6Ng01-304G10
Chromosome13 (Build37)
Map Location 117,147,740 - 117,148,911
singlet/doubletsinglet
Overlap geneEG668276
Upstream geneLOC100041023, LOC547402, LOC100041045, EG623174, Isl1
Downstream geneGm280, LOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304G10.bB6Ng01-304G10.g
ACCGA097967GA097968
length1,171490
definitionB6Ng01-304G10.b B6Ng01-304G10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatttggttttccctgctaactaacttacaacaaagttcagtgt
gcagtaattaaagtaaagaatcaatgtgtgtgaaaggcagagcaaatgaa
tagaggtggcctatggagaggccagggtacaaaccaggctcatcatccaa
cttcagatgatccttcagagatctctggagccatacaaatgtccacagtt
ttcctcaatagagctcaaatggttccgtgtttataatgttgcatcatttt
atcaacttatctggttacttctatgaagggcatgaatttgataaagagac
acaattttagctaaggtgaaaaccttgttttgttgaaggtaaaaagagat
gaagtttacttgctggaagctcttgcagtcactagaaccaatattttata
gaaggagaatacaggaagtgcatgccttgcatatcacacactcataaaac
agagttaactaactcagctttcaaatagggcctaaatcttttataacttc
tgctgaccagcaccaatttgtaatgtcagagacatagctgtctatgtcct
gttccagacatcaaagccccagttggcagcaatctgtatgataaaacaat
tcgaagagtgttcgttattccagaaaatgatcctctttatagcctacaga
ctgatggaggcagcttcaaggttatcattaaataacaaagatcttctgcc
cttaactatgcatttttatatttatttaagtgacaaaaacacatgtaaga
cttggtgataaaagtcaaaagtgcattttcttatgaactttgatctgccc
tcatagaatgcagataatccaacttatcaactcaaaacatcatttcactt
cccccctaccaacagcaatttcccaaaagctctgtgatagccttgacctt
agcaagggtcctcatcacattgactgctcacagtgagaatctctctgtat
atggtctgtgagatctaccattctaatagtgaccctttactgtcagataa
taagtgattatccaaagctgatttatgcagaggagcattacttttatttt
aaactcattcattgttcatcactttcaaatcattcaataatatattataa
tttttaaatactgtacgaaaaagccctcctcatgttctcaatgcatacat
ttctcatgtgacatcggataa

aaacttgtacagccactatggaagtcagtatgggagttcctcagggtgat
aacaactgatctacctcaaggcacagctataacactcctgggcatatacc
caaaagacatttcatcctccagtagagacacttgctcaagtatgctcgct
gctgctcttttttataatagccaagaactggaaacaacttagatatccag
caagaggagaaaggatgaaaagtatgaaagtttacacaatgggctcctat
tttttgttggtttgccttttctacctctggtgtgatagtttttactctat
catattatattttattttcttattacctcttagaagcatgttcatttttt
tttttgagccagaaaattcaccaaaattttattattggtttcagcttttt
atagttttttaagcctgttcatttttaacaagagaaagaaaggtagtgga
tctggatggggaagaaggtaggaatgaagtggtatgagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_117147740_117148911
seq2: B6Ng01-304G10.b_43_1213

seq1  GAATTCTATTTGGTTTTCCCTGCTAACTAACTTACAACAAAGTTCAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTGGTTTTCCCTGCTAACTAACTTACAACAAAGTTCAGTGT  50

seq1  GCAGTAATTAAAGTAAAGAATCAATGTGTGTGAAAGGCAGAGCAAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAATTAAAGTAAAGAATCAATGTGTGTGAAAGGCAGAGCAAATGAA  100

seq1  TAGAGGTGGCCTATGGAGAGGCCAGGGTACAAACCAGGCTCATCATCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTGGCCTATGGAGAGGCCAGGGTACAAACCAGGCTCATCATCCAA  150

seq1  CTTCAGATGATCCTTCAGAGATCTCTGGAGCCATACAAATGTCCACAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGATGATCCTTCAGAGATCTCTGGAGCCATACAAATGTCCACAGTT  200

seq1  TTCCTCAATAGAGCTCAAATGGTTCCGTGTTTATAATGTTGCATCATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAATAGAGCTCAAATGGTTCCGTGTTTATAATGTTGCATCATTTT  250

seq1  ATCAACTTATCTGGTTACTTCTATGAAGGGCATGAATTTGATAAAGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTTATCTGGTTACTTCTATGAAGGGCATGAATTTGATAAAGAGAC  300

seq1  ACAATTTTAGCTAAGGTGAAAACCTTGTTTTGTTGAAGGTAAAAAGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTAGCTAAGGTGAAAACCTTGTTTTGTTGAAGGTAAAAAGAGAT  350

seq1  GAAGTTTACTTGCTGGAAGCTCTTGCAGTCACTAGAACCAATATTTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTACTTGCTGGAAGCTCTTGCAGTCACTAGAACCAATATTTTATA  400

seq1  GAAGGAGAATACAGGAAGTGCATGCCTTGCATATCACACACTCATAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAATACAGGAAGTGCATGCCTTGCATATCACACACTCATAAAAC  450

seq1  AGAGTTAACTAACTCAGCTTTCAAATAGGGCCTAAATCTTTTATAACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAACTAACTCAGCTTTCAAATAGGGCCTAAATCTTTTATAACTTC  500

seq1  TGCTGACCAGCACCAATTTGTAATGTCAGAGACATAGCTGTCTATGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACCAGCACCAATTTGTAATGTCAGAGACATAGCTGTCTATGTCCT  550

seq1  GTTCCAGACATCAAAGCCCCAGTTGGCAGCAATCTGTATGATAAAACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGACATCAAAGCCCCAGTTGGCAGCAATCTGTATGATAAAACAAT  600

seq1  TCGAAGAGTGTTCGTTATTCCAGAAAATGATCCTCTTTATAGCCTACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGAGTGTTCGTTATTCCAGAAAATGATCCTCTTTATAGCCTACAGA  650

seq1  CTGATGGAGGCAGCTTCAAGGTTATCATTAAATAACAAAGATCTTCTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGAGGCAGCTTCAAGGTTATCATTAAATAACAAAGATCTTCTGCC  700

seq1  CTTAACTATGCATTTTTATATTTATTTAAGTGACAAAAACACATGTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTATGCATTTTTATATTTATTTAAGTGACAAAAACACATGTAAGA  750

seq1  CTTGGTGATAAAAGTCAAAAGTGCATTTTCTTATGAACTTTGATCTGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGATAAAAGTCAAAAGTGCATTTTCTTATGAACTTTGATCTGCCC  800

seq1  TCATAGAATGCAGATAATCCAACTTATCAACTCAAAACATCATTTCACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAATGCAGATAATCCAACTTATCAACTCAAAACATCATTTCACTT  850

seq1  CCCCCCTACCAACAGCAATTT-CCAAAAGCTCTGTGATAGCCTTGACCTT  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCCCCTACCAACAGCAATTTCCCAAAAGCTCTGTGATAGCCTTGACCTT  900

seq1  AGCAAGGGTCCTCATCACATTGACTGCTCAACAGTGAGAATCTCTCTGTA  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGCAAGGGTCCTCATCACATTGACTGCTC-ACAGTGAGAATCTCTCTGTA  949

seq1  TATGGTCTGTGAGATCTACCA-TCTTATAGTGA-CCTTTACTGTCAGATA  997
      ||||||||||||||||||||| ||| ||||||| ||||||||||||||||
seq2  TATGGTCTGTGAGATCTACCATTCTAATAGTGACCCTTTACTGTCAGATA  999

seq1  ATTAAGTGTATTTATCCAAAGCTGAATTTATGCAGA-GAGCATTACTTTA  1046
      | ||||||   ||||||||||||| ||||||||||| |||||||||||| 
seq2  A-TAAGTG--ATTATCCAAAGCTG-ATTTATGCAGAGGAGCATTACTTTT  1045

seq1  TTTTAAAACTCCATTCATTGTTCATTCACTTCAAAATTCATTCCATAATA  1096
       ||| ||||| ||||||||||||| ||||||  ||| |||||| ||||||
seq2  ATTTTAAACT-CATTCATTGTTCA-TCACTTTCAAA-TCATTCAATAATA  1092

seq1  TA-TAT-ATTTTTAAATACTGTAAGGAAAAAGCCT-CTCATG-TCTC-AT  1141
      || ||| |||||||||||||||| | ||||  ||| |||||| |||| ||
seq2  TATTATAATTTTTAAATACTGTACGAAAAAGCCCTCCTCATGTTCTCAAT  1142

seq1  GCATTACATTTCTCATTGTGACATCAGATAA  1172
      ||| ||||||||||| ||||||||| |||||
seq2  GCA-TACATTTCTCA-TGTGACATCGGATAA  1171


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