BAC Information

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BAC

Clone NameB6Ng01-304L05
Chromosome13 (Build37)
Map Location 14,655,009 - 14,656,094
singlet/doubletsinglet
Overlap genenone
Upstream geneLyst, LOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1
Downstream geneMrpl32, Psma2, AW209491, EG665099, LOC670994, EG625121, Gli3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304L05.bB6Ng01-304L05.g
ACCGA098189GA098190
length1,1911,081
definitionB6Ng01-304L05.b B6Ng01-304L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatttaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcctcatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagtcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacacgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccatttgcatacactagcaagattttatcga
aaggacccagatgtagctgtctctttgtgagactatgccgggcctagcaa
acacagaagtggatgctcatagtcagctaatggatggatccacagggctc
ccaattggaggagctagagaaagtaccccaagagctaaagggatctgcaa
cccttataggtggaacaacattatgaactaaaccagtacccctggagctt
cttgaattctagctgccattatgttatcaaaagatgggccctagttcggg
ccattcactggagaggatcctatcgaacttgcaactttatatggcccaag
ttacagggtaaatgccaaggctaaaaaggggggaaattggg
gaattctatcagacgtaatttgttcttgtgagtgagtaaattgctaggaa
gaccaattatgtatttagtacatgaatagttttaattactttgtaaaaat
gtgtagttgattaaaaaaactgatttttggcatcttttaacaatattgtt
ttacaatagcaccagtcttgtgaaatgtggttagatacaaagcaaagggt
cttagagatttctggtttcatatatctataaggcaaactgttcaccaaac
aaacaccagtactaacttgataaaagaaaagcaaccgttattttttatcc
attgtttatgttctattgaccaaaaataaatttccagataattctgtaga
ggaaaatagatggcttcagttacatcagtttttagtgtgaatgaaagttc
tcgggaagaagctaaacacaccttccacggactctcctgttgggctaatt
agctaatcagaacatactgtgcaatattcagcatgttaaagggccacata
caaattatcttgtactctctctagccactttaataccagcttattgtctt
cccctatttgtaagcttacatctttatgatcaccctatttaaaaaaaaat
cagtgtaatgccatgtgtgtacagatgcactgaaaggccagaagagagtg
gaggattccctggagatgaatttacaggtgctgtgagccacccagcatgg
ataccaggaatcaaactcaagatcctcctaaagaggagcagaggatctaa
ctgctgagcatctcccaagaccaggtaaatccttttgaatgtataaacag
acccctagctctaccagtcaaaagggttaggatcctctgagcgagtatct
gaggcagggagcagaggttgctcaatttacttctactgagctagcagttg
tttctagcaatgtgttcttaaagtttcttgttttatagctttctttgttg
cttctatgaagcatatcaattgtaatcactttggtataatagcatttact
gtagcaaatcttttctttctagacatcatcgctcattttggctccagaat
aaacctgtcttatcctctggtgggtgagcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_14655009_14656094
seq2: B6Ng01-304L05.g_69_1149

seq1  GAATTCTATCAGACGTAATTTGTTCTTGTGAGTGAGTAAATTGCTAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGACGTAATTTGTTCTTGTGAGTGAGTAAATTGCTAGGAA  50

seq1  GACCAATTATGTATTTAGTACATGAATAGTTTTAATTACTTTGTAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATTATGTATTTAGTACATGAATAGTTTTAATTACTTTGTAAAAAT  100

seq1  GTGTAGTTGATTAAAAAAACTGATTTTTGGCATCTTTTAACAATATTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTTGATTAAAAAAACTGATTTTTGGCATCTTTTAACAATATTGTT  150

seq1  TTACAATAGCACCAGTCTTGTGAAATGTGGTTAGATACAAAGCAAAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATAGCACCAGTCTTGTGAAATGTGGTTAGATACAAAGCAAAGGGT  200

seq1  CTTAGAGATTTCTGGTTTCATATATCTATAAGGCAAACTGTTCACCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGATTTCTGGTTTCATATATCTATAAGGCAAACTGTTCACCAAAC  250

seq1  AAACACCAGTACTAACTTGATAAAAGAAAAGCAACCGTTATTTTTTATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCAGTACTAACTTGATAAAAGAAAAGCAACCGTTATTTTTTATCC  300

seq1  ATTGTTTATGTTCTATTGACCAAAAATAAATTTCCAGATAATTCTGTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTATGTTCTATTGACCAAAAATAAATTTCCAGATAATTCTGTAGA  350

seq1  GGAAAATAGATGGCTTCAGTTACATCAGTTTTTAGTGTGAATGAAAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAGATGGCTTCAGTTACATCAGTTTTTAGTGTGAATGAAAGTTC  400

seq1  TCGGGAAGAAGCTAAACACACCTTCCACGGACTCTCCTGTTGGGCTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGAAGAAGCTAAACACACCTTCCACGGACTCTCCTGTTGGGCTAATT  450

seq1  AGCTAATCAGAACATACTGTGCAATATTCAGCATGTTAAAGGGCCACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATCAGAACATACTGTGCAATATTCAGCATGTTAAAGGGCCACATA  500

seq1  CAAATTATCTTGTACTCTCTCTAGCCACTTTAATACCAGCTTATTGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATCTTGTACTCTCTCTAGCCACTTTAATACCAGCTTATTGTCTT  550

seq1  CCCCTATTTGTAAGCTTACATCTTTATGATCACCCTATTTAAAAAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATTTGTAAGCTTACATCTTTATGATCACCCTATTTAAAAAAAAAT  600

seq1  CAGTGTAATGCCATGTGTGTACAGATGCACTGAAAGGCCAGAAGAGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAATGCCATGTGTGTACAGATGCACTGAAAGGCCAGAAGAGAGTG  650

seq1  GAGGATTCCCTGGAGATGAATTTACAGGTGCTGTGAGCCACCCAGCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTCCCTGGAGATGAATTTACAGGTGCTGTGAGCCACCCAGCATGG  700

seq1  ATACCAGGAATCAAACTCAAGATCCTCCTAAAGAGGAGCAGAGGATCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGAATCAAACTCAAGATCCTCCTAAAGAGGAGCAGAGGATCTAA  750

seq1  CTGCTGAGCATCTCCCAAGACCAGGTAAATCCTTTTGAATGTATAAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAGCATCTCCCAAGACCAGGTAAATCCTTTTGAATGTATAAACAG  800

seq1  ACCCCTAGCTCTACCAGTCAAAAGGGTTAGGATCCTCTGAGCGAGTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTAGCTCTACCAGTCAAAAGGGTTAGGATCCTCTGAGCGAGTATCT  850

seq1  GAGGCAGGGAGCAGAGGTTGCTCAAATTTACTTCTACTGAGCTAGCAGTT  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGGCAGGGAGCAGAGGTTGCTC-AATTTACTTCTACTGAGCTAGCAGTT  899

seq1  GTTTCTAGCAATGTGTTCTTAAAGTTTCTTGTTTTATAGCTTTCTTTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAGCAATGTGTTCTTAAAGTTTCTTGTTTTATAGCTTTCTTTGTT  949

seq1  GCTTCTATGAAAGCATAATCAAATTGTAATCACTTTGGTAT-ATAGCATT  999
      ||||||||| |||||| ||| |||||||||||||||||||| ||||||||
seq2  GCTTCTATG-AAGCAT-ATC-AATTGTAATCACTTTGGTATAATAGCATT  996

seq1  TACTGTAGCCAAAATC-TTTCTTTCTAGACCATCATCGCTCATATTTGGC  1048
      |||||||||  ||||| |||||||||||| ||||||||||||| ||||||
seq2  TACTGTAGC--AAATCTTTTCTTTCTAGA-CATCATCGCTCAT-TTTGGC  1042

seq1  TCCAGAATAAA-CTGTCTTATCCTCTTGGTGGTGAGCGT  1086
      ||||||||||| |||||||||||||| |  |||||||||
seq2  TCCAGAATAAACCTGTCTTATCCTCTGGTGGGTGAGCGT  1081