BAC Information

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BAC

Clone NameB6Ng01-305F08
Chromosome13 (Build37)
Map Location 79,637,375 - 79,703,245
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666883
Downstream geneLOC666925, LOC382780, EG666933
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305F08.bB6Ng01-305F08.g
ACCGA098649GA098650
length1,2101,099
definitionB6Ng01-305F08.b B6Ng01-305F08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,637,375 - 79,638,601)(79,702,136 - 79,703,245)
sequence
ggaattctacctataggcttctagtcagaaagatgctagtatcattaaga
ctaacaccctttgatgtttgtggtgtcaaaggcctttaatgccaacacta
tggaggcagagttacagtcaggccgactgctgtgagttcaaggccagcct
ggtctacacagtgagttccaggatagccagagttatataggagacaaatc
tacagactatatcttcctctgctctctcatcctcagggtctagattaata
gatttcaataatattcttatttgaaagaatctacatgtctgaattttttt
cttaaaataatattttcttgtgtaatttgtaaaagctaatatatgttttg
aagattccttaaaacaatttcactacccctagaaagaattttaatattct
gtctttttattatatctgtactatgtaaatatattcaaggattatctatc
tctttgagagtattatcaccctcaatttatgcaaagctcctgacaatctt
tgtttcagcatttttttttctattaagcattccagatacactgttcctgg
atgcccacccttagtaagggttgctattagccattgtggattaatcagtc
atgcacggggaaatcagagttatcagagttagccaactctaagtggtcaa
ctgtgagaaagtcagtggaattatacagaaattttagtttgttaaaaata
ggaaatggaaagcaacactaagtacatgtcaaattatctgtatgggaact
aatatgaagaaaaggctagaggtagtgcacaacacaattatgatattctc
cagattttcatagaaaagaaagtgatgggagtagtggctaacatgaggct
cctggcatagtttgaagtacatatgctagctgacatagaacacagtaata
agactctatatagagagtgtgcactgagtgtagaatctctcctctgaatt
cttactatatttcaaacttactcagttgatcatcagagattcttctctag
tccttaatagtacaataacaaatgcaaggataaatcctatctatgatagg
gtttttcattcattattgatgacagctatataagtgttatttttagtgta
agtactgatataaatataatcaccaccactgtatttcctaatgtctcatg
gattggatttgacctggcattcaatctgtctattggaccattggtagtgg
ataaagccaa

gcagttgaatccttctcaacagtctgtgttacgggaacctttataaacgt
gatccgcagttctggttctgaaatgaagtatccctcctgcgccagtccgg
agttttttctcgtcccgggtttcggcaccaattgttattcgacgcgttct
cacgaccggccaggaagaacacaacaaccagaatcttctacggcaaagct
ttattgcttacatctttttggggccagagtgtaagaagcaagagagagag
aaaaacgaaaccccttctatttaaaagagaacaacaattgcctaggacgc
atcactccctgattggctgcagcccatggccgagctgacgttcacgggaa
aaacagagtacaagtagtcgtaaatacccttggctcatgcgcagattatt
tgtttaccaacttagaacacaggatgtcagcgccatcttgtgacggcgaa
tgtgggggcggcttcccacactgccaccctgatcttaaaaactttagcca
acaaaacataaaccaataaacaattaaaaaacaaaaaaccaactggacac
aaaagaaaacttacattgttgcttataaaaacattttaaaatagttttaa
tagcaataaaaaaaagagactaaggacacatagttttactctcttttaaa
ggtgaagaagcaaagtttctacagagcagaaactaggttaggcaggaaac
atggtcacttagaggctaaatcaggactccaaggatgaatgtaggaacca
tgttaatttttgagtctttgtttatttttataccatgcctgtgaacatgt
tccccacaaagtaagaaaaacagagcaaggctaaatgagatagcaatacc
agaaaggaaactctatgattaggtacttaaaaaaataggacagaaatttc
atatacagatcccttctgagatggaatacatattcaaaaaacattaatat
ttttaaattttataggacattttcacaattcattgttatttccacatagc
tctatttgcatcctcaggagtactctgaattatttttttagagaggacta
ttatggaagtcagttatttatgacacactatatttgataggttaaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79637375_79638601
seq2: B6Ng01-305F08.b_45_1253

seq1  GAATTCTACCTATAGGCTTCTAGTCAGAAAGATGCTAGTATCATTAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTATAGGCTTCTAGTCAGAAAGATGCTAGTATCATTAAGAC  50

seq1  TAACACCCTTTGATGTTTGTGGTGTCAAAGGCCTTTAATGCCAACACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCCTTTGATGTTTGTGGTGTCAAAGGCCTTTAATGCCAACACTAT  100

seq1  GGAGGCAGAGTTACAGTCAGGCCGACTGCTGTGAGTTCAAGGCCAGCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGAGTTACAGTCAGGCCGACTGCTGTGAGTTCAAGGCCAGCCTG  150

seq1  GTCTACACAGTGAGTTCCAGGATAGCCAGAGTTATATAGGAGACAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACACAGTGAGTTCCAGGATAGCCAGAGTTATATAGGAGACAAATCT  200

seq1  ACAGACTATATCTTCCTCTGCTCTCTCATCCTCAGGGTCTAGATTAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTATATCTTCCTCTGCTCTCTCATCCTCAGGGTCTAGATTAATAG  250

seq1  ATTTCAATAATATTCTTATTTGAAAGAATCTACATGTCTGAATTTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATAATATTCTTATTTGAAAGAATCTACATGTCTGAATTTTTTTC  300

seq1  TTAAAATAATATTTTCTTGTGTAATTTGTAAAAGCTAATATATGTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAATATTTTCTTGTGTAATTTGTAAAAGCTAATATATGTTTTGA  350

seq1  AGATTCCTTAAAACAATTTCACTACCCCTAGAAAGAATTTTAATATTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCTTAAAACAATTTCACTACCCCTAGAAAGAATTTTAATATTCTG  400

seq1  TCTTTTTATTATATCTGTACTATGTAAATATATTCAAGGATTATCTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTATTATATCTGTACTATGTAAATATATTCAAGGATTATCTATCT  450

seq1  CTTTGAGAGTATTATCACCCTCAATTTATGCAAAGCTCCTGACAATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGAGTATTATCACCCTCAATTTATGCAAAGCTCCTGACAATCTTT  500

seq1  GTTTCAGCATTTTTTTTTCTATTAAGCATTCCAGATACACTGTTCCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGCATTTTTTTTTCTATTAAGCATTCCAGATACACTGTTCCTGGA  550

seq1  TGCCCACCCTTAGTAAGGGTTGCTATTAGCCATTGTGGATTAATCAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACCCTTAGTAAGGGTTGCTATTAGCCATTGTGGATTAATCAGTCA  600

seq1  TGCACGGGGAAATCAGAGTTATCAGAGTTAGCCAACTCTAAGTGGTCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGGGGAAATCAGAGTTATCAGAGTTAGCCAACTCTAAGTGGTCAAC  650

seq1  TGTGAGAAAGTCAGTGGAATTATACAGAAATTTTAGTTTGTTAAAAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAAAGTCAGTGGAATTATACAGAAATTTTAGTTTGTTAAAAATAG  700

seq1  GAAATGGAAAGCAACACTAAGTACATGTCAAATTATCTGTATGGGAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAAAGCAACACTAAGTACATGTCAAATTATCTGTATGGGAACTA  750

seq1  ATATGAAGAAAAGGCTAGAGGTAGTGCACAACACAATTATGATATTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGAAAAGGCTAGAGGTAGTGCACAACACAATTATGATATTCTCC  800

seq1  AGATTTTCATAGAAAAGAAAGTGATGGGAGTAGTGGCTAACATGAGGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTCATAGAAAAGAAAGTGATGGGAGTAGTGGCTAACATGAGGCTC  850

seq1  CTGGCATAGTTTGAAGTACATATGCTAGCTGACATAGAACACAGTAATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATAGTTTGAAGTACATATGCTAGCTGACATAGAACACAGTAATAA  900

seq1  GACTCTATATAGAGAGTGTGCACTGAGTGTAGAATCTCTCCTCTGAATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTATATAGAGAGTGTGCACTGAGTGTAGAATCTCTCCTCTGAATTC  950

seq1  TTACTATATTTCAAAACTTACTCAGTTGATCATCAGAGATTCTTCTCCTA  1000
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  TTACTATATTTC-AAACTTACTCAGTTGATCATCAGAGATTCTTCT-CTA  998

seq1  GTCCTTAATAGTAC-ATAACAAATGCAAGGATAAATCCTATCTATGATAG  1049
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTCCTTAATAGTACAATAACAAATGCAAGGATAAATCCTATCTATGATAG  1048

seq1  GGTTTTTCAATCATTATTGATGACAGCTTATATTAAGTGTTATTTTTAGT  1099
      ||||||||| ||||||||||||||||| |||| |||||||||||||||||
seq2  GGTTTTTCATTCATTATTGATGACAGC-TATA-TAAGTGTTATTTTTAGT  1096

seq1  GT-AGTACTGAATATAAATATATTCAACCACACTGTTTTTTCCCTAAAAT  1148
      || ||||||| ||||||||||| ||| |  |||||| |||  |||  |||
seq2  GTAAGTACTG-ATATAAATATAATCACCACCACTGTATTT--CCT--AAT  1141

seq1  GTCTTCATTGGTATTGTGAATTTTAAACTTGTAATTTTAAATCTTTGTAT  1198
      ||| ||||  | |||| ||  ||| | || | |   || ||||| | |||
seq2  GTC-TCAT--GGATTG-GA--TTTGACCTGGCA---TTCAATCTGTCTAT  1182

seq1  TTGACAATTTTGTAGTTGGATAAAGCCAA  1227
      | ||| | || |||| |||||||||||||
seq2  TGGACCA-TTGGTAG-TGGATAAAGCCAA  1209


seq1: chr13_79702136_79703245
seq2: B6Ng01-305F08.g_72_1170 (reverse)

seq1  GTGTTTTACACTATTAAATATAGTTGTTGTCATAAATAAACCTGACTCCC  50
      |||||| || |||| |||||||||   ||||||||||||  |||||| ||
seq2  GTGTTTAAC-CTATCAAATATAGT--GTGTCATAAATAA--CTGACTTCC  45

seq1  ATAATTAGTCTTCCTCT-TAAAAAAATAA-TCAGAGTACTCCCTGAGGAT  98
      |||| |||   |||||| ||||||||||| |||||||||| |||||||||
seq2  ATAA-TAG---TCCTCTCTAAAAAAATAATTCAGAGTACT-CCTGAGGAT  90

seq1  GCAAATAGAGCTTATGTGGAAAATAACAATGAATTTGTGAAAATGTCCTA  148
      ||||||||||| ||||||| ||||||||||||| ||||||||||||||||
seq2  GCAAATAGAGC-TATGTGG-AAATAACAATGAA-TTGTGAAAATGTCCTA  137

seq1  TAAAATTTTAAAATATTAATGTTTTTTGAATATGTATTCCATTCTCAGAA  198
      |||||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  TAAAATTTAAAAATATTAATGTTTTTTGAATATGTATTCCA-TCTCAGAA  186

seq1  GGGATCTGTATATGAAATTTCTGTCCTATTTTTTTAAGTACCTAATCATA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGTATATGAAATTTCTGTCCTATTTTTTTAAGTACCTAATCATA  236

seq1  GAG-TTCCCTTCTGGTATTGCTATCTCATTTAGCCTTGCTCTGTTTTTCT  297
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCCTTTCTGGTATTGCTATCTCATTTAGCCTTGCTCTGTTTTTCT  286

seq1  TACTTTGTGGGGAACATGTTCACAGGCATGGTATAAAAATAAACAAAGAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTGGGGAACATGTTCACAGGCATGGTATAAAAATAAACAAAGAC  336

seq1  TCAAAAATTAACATGGTTCCTACATTCATCCTTGGAGTCCTGATTTAGCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATTAACATGGTTCCTACATTCATCCTTGGAGTCCTGATTTAGCC  386

seq1  TCTAAGTGACCATGTTTCCTGCCTAACCTAGTTTCTGCTCTGTAGAAACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGACCATGTTTCCTGCCTAACCTAGTTTCTGCTCTGTAGAAACT  436

seq1  TTGCTTCTTCACCTTTAAAAGAGAGTAAAACTATGTGTCCTTAGTCTCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTTCACCTTTAAAAGAGAGTAAAACTATGTGTCCTTAGTCTCTT  486

seq1  TTTTTTATTGCTATTAAAACTATTTTAAAATGTTTTTATAAGCAACAATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTGCTATTAAAACTATTTTAAAATGTTTTTATAAGCAACAATG  536

seq1  TAAGTTTTCTTTTGTGTCCAGTTGGTTTTTTGTTTTTTAATTGTTTATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTTCTTTTGTGTCCAGTTGGTTTTTTGTTTTTTAATTGTTTATTG  586

seq1  GTTTATGTTTTGTTGGCTAAAGTTTTTAAGATCAGGGTGGCAGTGTGGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGTTTTGTTGGCTAAAGTTTTTAAGATCAGGGTGGCAGTGTGGGA  636

seq1  AGCCGCCCCCACATTCGCCGTCACAAGATGGCGCTGACATCCTGTGTTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGCCCCCACATTCGCCGTCACAAGATGGCGCTGACATCCTGTGTTCT  686

seq1  AAGTTGGTAAACAAATAATCTGCGCATGAGCCAAGGGTATTTACGACTAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGTAAACAAATAATCTGCGCATGAGCCAAGGGTATTTACGACTAC  736

seq1  TTGTACTCTGTTTTTCCCGTGAACGTCAGCTCGGCCATGGGCTGCAGCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTCTGTTTTTCCCGTGAACGTCAGCTCGGCCATGGGCTGCAGCCA  786

seq1  ATCAGGGAGTGATGCGTCCTAGGCAATTGTTGTTCTCTTTTAAATAGAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGAGTGATGCGTCCTAGGCAATTGTTGTTCTCTTTTAAATAGAAG  836

seq1  GGGTTTCGTTTTTCTCTCTCTCTTGCTTCTTACACTCTGGCCCCAAAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCGTTTTTCTCTCTCTCTTGCTTCTTACACTCTGGCCCCAAAAAG  886

seq1  ATGTAAGCAATAAAGCTTTGCCGTAGAAGATTCTGGTTGTTGTGTTCTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGCAATAAAGCTTTGCCGTAGAAGATTCTGGTTGTTGTGTTCTTC  936

seq1  CTGGCCGGTCGTGAGAACGCGTCGAATAACAATTGGTGCCGAAACCCGGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCGGTCGTGAGAACGCGTCGAATAACAATTGGTGCCGAAACCCGGG  986

seq1  ACGAGAAAAAACTCCGGACTGGCGCAGGAGGGATACTTCATTTCAGAACC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAAAAAACTCCGGACTGGCGCAGGAGGGATACTTCATTTCAGAACC  1036

seq1  AGAACTGCGGATCACGTTTATAAAGGTTCCCGTAACACAGACTGTTGAGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCGGATCACGTTTATAAAGGTTCCCGTAACACAGACTGTTGAGA  1086

seq1  AGGATTCAACTGC  1110
      |||||||||||||
seq2  AGGATTCAACTGC  1099


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