BAC Information

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BAC

Clone NameB6Ng01-305O13
Chromosome13 (Build37)
Map Location 119,470,301 - 119,471,471
singlet/doubletsinglet
Overlap genenone
Upstream geneHcn1, LOC100041695, LOC674926, Mrps30, LOC668309
Downstream geneLOC100041278, Fgf10, LOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305O13.bB6Ng01-305O13.g
ACCGA099080GA099081
length1,2371,173
definitionB6Ng01-305O13.b B6Ng01-305O13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcaccctcagatccatgggttaatattatggtgggttgattta
tacttgagagatctcagatccacttaccaggctaacagtgcctgataaat
gacccaaaatgtattcgctaactggacaaggttgttggtcacttaacaca
ataaaattgaaaaaattgcttaacagaatacaaaagctaaaacaaaaata
tgagaaagtaataaaactccgagaaataattaagaccatctacaaacaaa
acttatttaaagaaaatcatatagtttaacatgaaaatgagtgttttttc
tgaacaatagtatttatgaacactgatttatatatttcagggttaaataa
tgaaatagcaattcatattttctagtatcttatactaatataatgaaaat
aaagtgataaaaatgctttccttatggactatgtatattctgttttcata
gtgagattcatgcatcctcccttgattgattcttataaattagattcttt
gggtctgtggattgtagcatggttatcctttattttacaactaatatcca
attataagtgagtacacgccatgtttttctttctgggtctgggttacctc
actcaggatgatcttttctaattcaatctctttctcttaaaattccacaa
tgtcattgtttttaatccattaatcaatcaattaattaattcactttaca
tcccaattgaagccctcccatctcctcccagtgtctcttcacatagcacc
tcctcctatccatcctccccttctcctctgagaagagggaggtctccttt
gggtaccaagccaccatggcatatcaagtcactgcaggtctagacacaac
ctttcccactgtggccattgtttttaatagctaagcaatactccattgtg
taaatgtatcatattctctttatccattcttcagttgagagacatctagg
ttgtttccagtttctggctattaagatcaaagctactatgagttgagcaa
atgtctgtgttgtatggtggagtatcttttggaatatgcctgggagtggt
ataggtgattcttcggtcattgatctagttttctgagaaactgcccaatg
gattccaggtgccttgacagtttgatacttccacccagcattcggaaagt
cttgttcattcatgcagcattaggataccttgattgaacttagccatcct
aacggtgtaagccttggggatctcagagccaattgat
gaattcttaatccgccttcatgaaaaacaaccatacaagttatccaccaa
tgtccttcatgagtggctctatctcttgagattttgctagagtctatagt
tacaataaacaagcccatatttcagtggtgtacataacaaacgcttttgt
ctaatttctatgacttttttttctactggtcatcttcatattttctgcca
gttccttcattcttggattgtcacagaagaagctgtctttctccgagaat
gcaggcgcagtacagaagaaatcacagaatggttacaccttatgtacttt
atttaagttgagaattatatgctattctcctgcttatatttcataggcaa
aataaatcaaagagagaagcttagaaccaactataataaaaataaaataa
aatataaattctcccatatgaaggaaaagaagtaccccaatgaacaaagc
aactccctatgatttctttccctttgacactactattcctagttcctgac
ttgtaaaatgatagtgtcacactgacaggccacgctggcatgtggtgaat
tttcagatgcctattgtatattttcttgaatacaagttaccatgtcagtt
tgtctcaagtaccttcttatcataatcttctttggtgcatcaaggaacag
gccatgaaatttccaatgttctaaaacctgctgtcagggaacagagttgc
ggtgttatgtactcttctggaggagagcttcactttctctgatgaattct
cttgaacaggcctttgtttaagcaaaataagcaagcacttcttcttttag
taaaaagcaaagatggtgaaatgctaagcaggaaaaccatgacacacttc
tctaccagactcttccctcttgtttatatggccaggaggtcagctttgag
gatggtggtcactgagccagcccggcttagcattgatgctggcctctccc
ggggaactctgcagcatacagaggagattccagcctattatgaccaactc
tctatgctcatataacagacacactaatatctattttatataagcataag
acaagttatccatctatgggagactcccacttctaatgggatgagtcaaa
ctacacttacctgacactatggacattgtagagagtagtcgaaccggagg
tggagaggttacttaggatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119470301_119471471
seq2: B6Ng01-305O13.g_67_1239

seq1  GAATTCTTAATCCGCCTTCATGAAAAACAACCATACAAGTTATCCACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATCCGCCTTCATGAAAAACAACCATACAAGTTATCCACCAA  50

seq1  TGTCCTTCATGAGTGGCTCTATCTCTTGAGATTTTGCTAGAGTCTATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTCATGAGTGGCTCTATCTCTTGAGATTTTGCTAGAGTCTATAGT  100

seq1  TACAATAAACAAGCCCATATTTCAGTGGTGTACATAACAAACGCTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAAACAAGCCCATATTTCAGTGGTGTACATAACAAACGCTTTTGT  150

seq1  CTAATTTCTATGACTTTTTTTTCTACTGGTCATCTTCATATTTTCTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCTATGACTTTTTTTTCTACTGGTCATCTTCATATTTTCTGCCA  200

seq1  GTTCCTTCATTCTTGGATTGTCACAGAAGAAGCTGTCTTTCTCCGAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCATTCTTGGATTGTCACAGAAGAAGCTGTCTTTCTCCGAGAAT  250

seq1  GCAGGCGCAGTACAGAAGAAATCACAGAATGGTTACACCTTATGTACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCGCAGTACAGAAGAAATCACAGAATGGTTACACCTTATGTACTTT  300

seq1  ATTTAAGTTGAGAATTATATGCTATTCTCCTGCTTATATTTCATAGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTGAGAATTATATGCTATTCTCCTGCTTATATTTCATAGGCAA  350

seq1  AATAAATCAAAGAGAGAAGCTTAGAACCAACTATAATAAAAATAAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATCAAAGAGAGAAGCTTAGAACCAACTATAATAAAAATAAAATAA  400

seq1  AATATAAATTCTCCCATATGAAGGAAAAGAAGTACCCCAATGAACAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAATTCTCCCATATGAAGGAAAAGAAGTACCCCAATGAACAAAGC  450

seq1  AACTCCCTATGATTTCTTTCCCTTTGACACTACTATTCCTAGTTCCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCTATGATTTCTTTCCCTTTGACACTACTATTCCTAGTTCCTGAC  500

seq1  TTGTAAAATGATAGTGTCACACTGACAGGCCACGCTGGCATGTGGTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAATGATAGTGTCACACTGACAGGCCACGCTGGCATGTGGTGAAT  550

seq1  TTTCAGATGCCTATTGTATATTTTCTTGAATACAAGTTACCATGTCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATGCCTATTGTATATTTTCTTGAATACAAGTTACCATGTCAGTT  600

seq1  TGTCTCAAGTACCTTCTTATCATAATCTTCTTTGGTGCATCAAGGAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAGTACCTTCTTATCATAATCTTCTTTGGTGCATCAAGGAACAG  650

seq1  GCCATGAAATTTCCAATGTTCTAAAACCTGCTGTCAGGGAACAGAGTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGAAATTTCCAATGTTCTAAAACCTGCTGTCAGGGAACAGAGTTGC  700

seq1  GGTGTTATGTACTCTTCTGGAGGAGAGCTTCACTTTCTCTGATGAATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTATGTACTCTTCTGGAGGAGAGCTTCACTTTCTCTGATGAATTCT  750

seq1  CTTGAACAGGCCTTTGTTTAAGCAAAATAAGCAAGCACTTCTTCTTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACAGGCCTTTGTTTAAGCAAAATAAGCAAGCACTTCTTCTTTTAG  800

seq1  TAAAAAGCAAAGATGGTGAAATGCTAAGCAGGAAAACCATGACACACTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGCAAAGATGGTGAAATGCTAAGCAGGAAAACCATGACACACTTC  850

seq1  TCTACCAGACTCTTCCCTCTTGTTTATATGGCCAGGAGGTCAGC-TTGAG  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTACCAGACTCTTCCCTCTTGTTTATATGGCCAGGAGGTCAGCTTTGAG  900

seq1  GATGGTGGTCACTGAGCCAG-CCGGCTTAGCATTGATGCTGGCCTCTCCC  948
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GATGGTGGTCACTGAGCCAGCCCGGCTTAGCATTGATGCTGGCCTCTCCC  950

seq1  -GGGAACTCTGCAGCATACAGAGGAGATTCCAGCCTATTATGACCAACTC  997
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACTCTGCAGCATACAGAGGAGATTCCAGCCTATTATGACCAACTC  1000

seq1  TCTATGCTCATATAACAGACACACTAATATCTATTTTATATAAGCAT-AG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTATGCTCATATAACAGACACACTAATATCTATTTTATATAAGCATAAG  1050

seq1  ACAAGTTAATCCATCTATGGAGGACT-CCACTTTCCTAAATGGAATGAGT  1095
      ||||||| ||||||||||||  |||| ||||||  || ||||| ||||||
seq2  ACAAGTT-ATCCATCTATGGGAGACTCCCACTT--CT-AATGGGATGAGT  1096

seq1  C-AACTACACTAACTGAACACTATGGACA-TGTAGAGAGGTAGTTCGAAC  1143
      | ||||||||| ||   |||||||||||| |||||||| |||| ||||||
seq2  CAAACTACACTTACCTGACACTATGGACATTGTAGAGA-GTAG-TCGAAC  1144

seq1  AGGAGGTGGGAGAGG-TACTTA-GATATAT  1171
       |||||| ||||||| |||||| |||||||
seq2  CGGAGGT-GGAGAGGTTACTTAGGATATAT  1173