BAC Information

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BAC

Clone NameB6Ng01-307G11
Chromosome13 (Build37)
Map Location 8,334,892 - 8,489,437
singlet/doubletdoublet
Overlap geneAdarb2, EG666941
Upstream geneEG623516, LOC791083, LOC382722
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307G11.bB6Ng01-307G11.g
ACCGA100186GA100187
length1,1591,135
definitionB6Ng01-307G11.b B6Ng01-307G11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,488,310 - 8,489,437)(8,334,892 - 8,336,015)
sequence
gaattcttgtggctttcctggtccttgatagaccttgagtttaacgtccc
agtgaagcagcaagccgagtttttgactgtcccctgtcatcccagatagc
accagagatcatcgctaagttgtcttagtgattattttgctctcaggttt
ctgttttccaaagccaaatgagcatcctctcatcttctctgcccgatctt
ttgtatcataactactgttctctttgactatgctgatgtgggagtccatt
ctagccctccactaggtaggtaccttatatctatcttcactcccagtgtt
ctgtgtctgcttcagggttctgctttctcatcagctcaagttcttattcc
atgtgtcaatatttcctattagttcccatggaatcctttggcagctagag
agagaattgtgacaatacacacactgttattgcttgaatataaaaatggc
tcccccataggctcacatgtgtttgaacactttgcccccatgtggtggca
ctggttttggagattatgacacctttggacatgaggccatcgagacagag
ctttagaatactaggtcagctcagttactcttagagtgttccctaccatc
tggtcaggtcagatgtaaccgtcacacctcaaggcccctggagatctagc
cattacagatgttgtcatttatccctactgtgaaagattataactctata
aaagatgagaccaaatacgtccttgcttacttctgctgtttctgtcagat
ggcctgccacagcaaggagaaaatgggatactttgtacctggatctggag
gtacaggtccattctttcttgctgctgatcctggggtcttaacaaagcgt
cactggagggtgaatgtggaatggctgaggtttgtgggcctgaggattat
ctaatgcatctgcttgtttacatgcagttacaaattaagtaacatcttta
agtgagaaataaaagcgcagcgggctttctgatgcctctctgggccattt
cctaggttaacacccaatttgaagaacatactggacctaagaataaggaa
tgaacctcctcagaaggtcctacaccacctcgtttaagtttccaagagaa
aggttgtttgaggccttataggggtaagcttggaaatagacacaaggaag
tggtaacct

gaattctccattctttgacatagtcatcagtctttgtaccccaagttttg
tcacagacataccaaaaaaggtccaaaatgataaaaaccatgtccccttt
cgttgagatcagtttaacctcaggtttaattggtggaataaatacctgtt
ggtgactagtctcagcctgtttcacaggtcctttcccttaaaggaagcaa
agaccagctttttaaacctccggttcaaaaaagaaaaaaagaaaaagaaa
aaaaaaaaaaagaaagaaacctccgggtccttctggaggtacagttcagc
tccacaggcacacaacccacactcgatgctgctctgatgatcctgaattg
taagaaaaaaattcattcaagaaagtactatctcttaccttaatacttta
gtgctagaaactgaatccagggacaaacacacacacacacacacacacac
acacacacacacacacacacacacgtgttcagccttagagctacagcttc
catccattctctgatttaaaaaaaaaaaagaaaaagaaaaagtaaaaaca
tggtttgtcctgtgtccctgactaacttggagatccctagtgttggactc
acagaaatctgcccacctccatcttcagagtgctgaggttaaagccacat
tgctaccatggacctggcctctctgttacttttgttgcctctcgataatc
ttccaattaaacaaaaatttcccgtggcctcttcctgctttgcatttatg
ccccagaaccctttgtgaaaacaaaacaagcaaagcaaaacaaaacaaaa
caaaacaaaaccaacacaacaacaataaaaaaagagaaggcccagttgta
cacacatcatgtcagtgctggaaaaggagcacaacacaggcagcctacct
actcagtgactcataggtgggaacttcctattgcaaagtgggggtggggt
gcagacaatatttgagaaacagcgaagatgactctgacctccgtgcctaa
gcatgtgcacggaacacacgcacacacacacttaaacaacaataagttca
taacataacataccacgaactacttacctacaaactgtaattaacttttt
gcctagccaggattgctctcctaagtcctggccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8488310_8489437
seq2: B6Ng01-307G11.b_42_1200 (reverse)

seq1  AGCTTACCACTTCCTTGT-CCTATCTCCAA-CCTACCCC-ATAAGGCCTC  47
      || |||||||||||||||  |||| ||||| | |||||| ||||||||||
seq2  AGGTTACCACTTCCTTGTGTCTATTTCCAAGCTTACCCCTATAAGGCCTC  50

seq1  -AACAAC--TTCTCT--GGAACTAACA----GTGGT---AGAC--TCTGA  83
       ||||||  ||||||  | |||| | |    |||||    |||  |||||
seq2  AAACAACCTTTCTCTTGGAAACTTAAACGAGGTGGTGTAGGACCTTCTGA  100

seq1  G--AGTTCATCCCT--ATCT--AGTCCAGTATG-TCTTCAAAT--GGTG-  123
      |   |||||| |||   |||   |||||||||| |||||||||  |||| 
seq2  GGAGGTTCATTCCTTATTCTTAGGTCCAGTATGTTCTTCAAATTGGGTGT  150

seq1  TAACCTA-GAAAT-GCCCAGAGA-GCATCAG-AAGCCCGCTGCGCTTTTA  169
      ||||||| ||||| ||||||||| ||||||| ||||||||||||||||||
seq2  TAACCTAGGAAATGGCCCAGAGAGGCATCAGAAAGCCCGCTGCGCTTTTA  200

seq1  -TTCTCACTTAAAGATGTTACTTAATTTGTAACTGCATGTAAACAAGCAG  218
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACTTAAAGATGTTACTTAATTTGTAACTGCATGTAAACAAGCAG  250

seq1  ATGCATTAGATAATCCTCAGGCCCACAAACCTCAGCCCATTCCACATTCA  268
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGCATTAGATAATCCTCAGGCCCACAAACCTCAG-CCATTCCACATTCA  299

seq1  CCCTCCAGTGACGCTTTGTTAAGACCCCAGGATCAGCAGCAAGAAAGAAT  318
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAGTGACGCTTTGTTAAGACCCCAGGATCAGCAGCAAGAAAGAAT  349

seq1  GGACCTGTACCTCCAGATCCAGGTACAAAGTATCCCATTTTCTCCTTGCT  368
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGTACCTCCAGATCCAGGTACAAAGTATCCCATTTTCTCCTTGCT  399

seq1  GTGGCAGGCCATCTGACAGAAACAGCAGAAGTAAGCAAGGACGTATTTGG  418
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGGCCATCTGACAGAAACAGCAGAAGTAAGCAAGGACGTATTTGG  449

seq1  TCTCATCTTTTATAGAGTTATAATCTTTCACAGTAGGGATAAATGACAAC  468
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTTTTATAGAGTTATAATCTTTCACAGTAGGGATAAATGACAAC  499

seq1  ATCTGTAATGGCTAGATCTCCAGGGGCCTTGAGGTGTGACGGTTACATCT  518
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAATGGCTAGATCTCCAGGGGCCTTGAGGTGTGACGGTTACATCT  549

seq1  GACCTGACCAGATGGTAGGGAACACTCTAAGAGTAACTGAGCTGACCTAG  568
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGACCAGATGGTAGGGAACACTCTAAGAGTAACTGAGCTGACCTAG  599

seq1  TATTCTAAAGCTCTGTCTCGATGGCCTCATGTCCAAAGGTGTCATAATCT  618
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAAAGCTCTGTCTCGATGGCCTCATGTCCAAAGGTGTCATAATCT  649

seq1  CCAAAACCAGTGCCACCACATGGGGGCAAAGTGTTCAAACACATGTGAGC  668
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCAGTGCCACCACATGGGGGCAAAGTGTTCAAACACATGTGAGC  699

seq1  CTATGGGGGAGCCATTTTTATATTCAAGCAATAACAGTGTGTGTATTGTC  718
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGGGAGCCATTTTTATATTCAAGCAATAACAGTGTGTGTATTGTC  749

seq1  ACAATTCTCTCTCTAGCTGCCAAAGGATTCCATGGGAACTAATAGGAAAT  768
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTCTCTCTAGCTGCCAAAGGATTCCATGGGAACTAATAGGAAAT  799

seq1  ATTGACACATGGAATAAGAACTTGAGCTGATGAGAAAGCAGAACCCTGAA  818
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACACATGGAATAAGAACTTGAGCTGATGAGAAAGCAGAACCCTGAA  849

seq1  GCAGACACAGAACACTGGGAGTGAAGATAGATATAAGGTACCTACCTAGT  868
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACACAGAACACTGGGAGTGAAGATAGATATAAGGTACCTACCTAGT  899

seq1  GGAGGGCTAGAATGGACTCCCACATCAGCATAGTCAAAGAGAACAGTAGT  918
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCTAGAATGGACTCCCACATCAGCATAGTCAAAGAGAACAGTAGT  949

seq1  TATGATACAAAAGATCGGGCAGAGAAGATGAGAGGATGCTCATTTGGCTT  968
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATACAAAAGATCGGGCAGAGAAGATGAGAGGATGCTCATTTGGCTT  999

seq1  TGGAAAACAGAAACCTGAGAGCAAAATAATCACTAAGACAACTTAGCGAT  1018
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACAGAAACCTGAGAGCAAAATAATCACTAAGACAACTTAGCGAT  1049

seq1  GATCTCTGGTGCTATCTGGGATGACAGGGGACAGTCAAAAACTCGGCTTG  1068
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGGTGCTATCTGGGATGACAGGGGACAGTCAAAAACTCGGCTTG  1099

seq1  CTGCTTCACTGGGACGTTAAACTCAAGGTCTATCAAGGACCAGGAAAGCC  1118
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCACTGGGACGTTAAACTCAAGGTCTATCAAGGACCAGGAAAGCC  1149

seq1  ACAAGAATTC  1128
      ||||||||||
seq2  ACAAGAATTC  1159


seq1: chr13_8334892_8336015
seq2: B6Ng01-307G11.g_67_1201

seq1  GAATTCTCCATTCTTTGACATAGTCATCAGTCTTTGTACCCCAAGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATTCTTTGACATAGTCATCAGTCTTTGTACCCCAAGTTTTG  50

seq1  TCACAGACATACCAAAAAAGGTCCAAAATGATAAAAACCATGTCCCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGACATACCAAAAAAGGTCCAAAATGATAAAAACCATGTCCCCTTT  100

seq1  CGTTGAGATCAGTTTAACCTCAGGTTTAATTGGTGGAATAAATACCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGAGATCAGTTTAACCTCAGGTTTAATTGGTGGAATAAATACCTGTT  150

seq1  GGTGACTAGTCTCAGCCTGTTTCACAGGTCCTTTCCCTTAAAGGAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTAGTCTCAGCCTGTTTCACAGGTCCTTTCCCTTAAAGGAAGCAA  200

seq1  AGACCAGCTTTTTAAACCTCCGGTTCAAAAAAGAAAAAAAGAAAAAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGCTTTTTAAACCTCCGGTTCAAAAAAGAAAAAAAGAAAAAGAAA  250

seq1  AAAAAAAAAAAGAAAGAAACCTCCGGGTCCTTCTGGAGGTACAGTTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGAAAGAAACCTCCGGGTCCTTCTGGAGGTACAGTTCAGC  300

seq1  TCCACAGGCACACAACCCACACTCGATGCTGCTCTGATGATCCTGAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGGCACACAACCCACACTCGATGCTGCTCTGATGATCCTGAATTG  350

seq1  TAAGAAAAAAATTCATTCAAGAAAGTACTATCTCTTACCTTAATACTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAAAATTCATTCAAGAAAGTACTATCTCTTACCTTAATACTTTA  400

seq1  GTGCTAGAAACTGAATCCAGGGACAAACACACACACACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGAAACTGAATCCAGGGACAAACACACACACACACACACACACAC  450

seq1  ACACACACACACACACACACACACGTGTTCAGCCTTAGAGCTACAGCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACGTGTTCAGCCTTAGAGCTACAGCTTC  500

seq1  CATCCATTCTCTGATTTAAAAAAAAAAAAGAAAAAGAAAAAGTAAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTCTCTGATTTAAAAAAAAAAAAGAAAAAGAAAAAGTAAAAACA  550

seq1  TGGTTTGTCCTGTGTCCCTGACTAACTTGGAGATCCCTAGTGTTGGACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTCCTGTGTCCCTGACTAACTTGGAGATCCCTAGTGTTGGACTC  600

seq1  ACAGAAATCTGCCCACCTCCATCTTCAGAGTGCTGAGGTTAAAGCCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATCTGCCCACCTCCATCTTCAGAGTGCTGAGGTTAAAGCCACAT  650

seq1  TGCTACCATGGACCTGGCCTCTCTGTTACTTTTGTTGCCTCTCGATAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCATGGACCTGGCCTCTCTGTTACTTTTGTTGCCTCTCGATAATC  700

seq1  TTCCAATTAAACAAAAATTTCCCGTGGCCTCTTCCTGCTTTGCATTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTAAACAAAAATTTCCCGTGGCCTCTTCCTGCTTTGCATTTATG  750

seq1  CCCCAGAACCC-TTGTGAAAACAAAACAAAGCAAAGCAAAACAAAACAAA  799
      ||||||||||| ||||||||||||||| ||||||||||||||||||||||
seq2  CCCCAGAACCCTTTGTGAAAACAAAAC-AAGCAAAGCAAAACAAAACAAA  799

seq1  ACAAAACAAAACCAACACAACAACAAT-AAAAAAGAGAAGGCCCAGTTGT  848
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACAAAACAAAACCAACACAACAACAATAAAAAAAGAGAAGGCCCAGTTGT  849

seq1  ACACACATCATGTCAGTGCTGG-AAAGGAGCACAACACAGGCAGCCTACC  897
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACACACATCATGTCAGTGCTGGAAAAGGAGCACAACACAGGCAGCCTACC  899

seq1  TACTCAGTGACTCATAGGTGGGAACTTCCTATTGCAAAGTGGGGGTGGGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTGACTCATAGGTGGGAACTTCCTATTGCAAAGTGGGGGTGGGG  949

seq1  TGCAGGACATA-TTGAG-AACAGCG-AGATGACTCTGACCTCCGTGCCTA  994
      |||||   ||| ||||| ||||||| ||||||||||||||||||||||||
seq2  TGCAGACAATATTTGAGAAACAGCGAAGATGACTCTGACCTCCGTGCCTA  999

seq1  AGCATGTGCACGG-ACACACGCACACACACAC-TAAACA--CATA--GTC  1038
      ||||||||||||| |||||||||||||||||| ||||||   |||   ||
seq2  AGCATGTGCACGGAACACACGCACACACACACTTAAACAACAATAAGTTC  1049

seq1  AT-ACAT-ACATACAAGGAAATTACTTA-CTACAAACTGTAAATAACTTT  1085
      || |||| |||||| | | || |||||| ||||||||||||| |||||||
seq2  ATAACATAACATACCACG-AACTACTTACCTACAAACTGTAATTAACTTT  1098

seq1  TTG-CTAGCCAAAGGAATTGCTCTCCCTAGGCCTGGCCAT  1124
      ||| |||||||   | ||||||||||  || |||||||||
seq2  TTGCCTAGCCA---GGATTGCTCTCCTAAGTCCTGGCCAT  1135


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