BAC Information

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BAC

Clone NameB6Ng01-307K16
Chromosome13 (Build37)
Map Location 77,974,408 - 77,975,576
singlet/doubletsinglet
Overlap gene1110033M05Rik
Upstream geneMctp1, EG666607, Ankrd32, 2210408I21Rik, LOC631139, LOC675063, D13Mgi7
Downstream gene1700013G10Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307K16.bB6Ng01-307K16.g
ACCGA100377GA100378
length1,1771,164
definitionB6Ng01-307K16.b B6Ng01-307K16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcctttcaaagaatcacaatttactatggttgagaaaagtag
agaaataaacaatgaagaacactgttatattctaaacattatttccactt
aaaaggttaaatggtttactattctaatgttatttaaaacaaaaacaaaa
aaacctagcacttccatgttgagcaaatcaataatctatccatacaaaga
tatttcacagtttcctccacacagttttacctcaaaaagcacatcaacaa
atgttctacattagacaaagcaggtgacactggtgcaggggaacagaact
ccatgagcatctcaccaagtgcttgctgtctggaattcctcagttcttga
ctattattttcaaatacttaatgaactgtacacacattttccatgcatgt
tctctctaaaacatatactgtgttaaaatcacaaccagaaccactgaaga
aataatttactaactatatcataaaataagacagtttaaaaagcactaat
ttttgtcattttagtatatatttcaacttagtaaatgaatatttaattat
tctgacttcttaattgaataatcagttactacatttttttctacaatcac
aattagagtagtacccaaataaaagttgcatgtttctttgcacaggtgga
taaagcattaacttaaggaactcataaagccaaactttgaggattcacaa
aatctactaagaaaagcattctctaggatttgtcttaaatgctatcatta
tatccaggacaaaagaatactgaacatattaaaatatttactgttctatt
ttgtaaatatatatccaagatatatttacaatgttaattataaaatatac
tgtcattttttagaaataaaatatatacatagacacatgtaccatttcta
acataccctctctatcataaatgttttttacaagacaacagtttttgagg
aatattccctagtaacatataaaagaaactcatactttgtgaaaactggc
tcttcactgaataactttaaaaagacttatacacaacaatttgaacatta
gacatactaggaatagaaaaaaatatttctaaaaatataacaaattaaac
aggttttatatgaattatttaagctgaaacatttttatttgagctcagaa
tattatcaatccaagaaccaatgtcct
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctttgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagacgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt
gaaagataagttattgcacctggcccctcctacaaccaagaaagaagcac
aacgtttagtgggtctatttggattctgggagacaacacatccctcactt
gggtgtgttacttaggcctatttaccaagtgactcggaaagctgctagct
tttgtgtggggcctggaacaggagaaaggccctttcaacaggtccaaggc
tgctgtgcagctgctctaccacttgggaccatatgacccagcagatccga
tggtactttgaagtgtctgtgactgataaaagatgcctgttgggagcctc
tgcaaggcccccttgtagttgaattcacaagaaaaagtccttcggatttg
gaagcagccttacatcatctgcgacactcatgctctcctcttggtaaata
aaccaggcactacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_77974408_77975576
seq2: B6Ng01-307K16.b_45_1221 (reverse)

seq1  AGGACAT--GGTCTTGGAATTTAAATAATATTCTGAGCCCTCAAAT-AAA  47
      |||||||  | |||||||   |  |||||||||||||  ||||||| |||
seq2  AGGACATTGGTTCTTGGA---TTGATAATATTCTGAG--CTCAAATAAAA  45

seq1  ATGTTTCAAGCTTAAAATAATCATATAAA--CTG-TTAAATTGTAATA-T  93
      ||||||| ||||||||  | |||||||||  ||| |||| |||| ||| |
seq2  ATGTTTC-AGCTTAAATAATTCATATAAAACCTGTTTAATTTGTTATATT  94

seq1  TTTAGA---ATATTTTTCTATT-CTAGTATTGTTCTAATGTTC-AATTGT  138
      ||||||   || |||||||||| |||||||   |||||||||| ||||||
seq2  TTTAGAAATATTTTTTTCTATTCCTAGTAT--GTCTAATGTTCAAATTGT  142

seq1  TGTGTATAAGTCTTTT--AAGTTATTCAGTGAAGAGCCAGTTTTCACAAA  186
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  TGTGTATAAGTCTTTTTAAAGTTATTCAGTGAAGAGCCAGTTTTCACAAA  192

seq1  GTATGAGTTTCTTTTATATGTTACTA-GGAATATTCCTCAAAAACTGTTG  235
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTATGAGTTTCTTTTATATGTTACTAGGGAATATTCCTCAAAAACTGTTG  242

seq1  TCTTGTAAAAAACATTTATGATAGAGAGGGTATGTTAGAAATGGTACATG  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAAAAAACATTTATGATAGAGAGGGTATGTTAGAAATGGTACATG  292

seq1  TGTCTATGTATATATTTTATTTCT-AAAAATGACAGTATATTTTATAATT  334
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTCTATGTATATATTTTATTTCTAAAAAATGACAGTATATTTTATAATT  342

seq1  AACATTGTAAATATATCTTGGATATATATTTACAAAATAGAACAGTAAAT  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTAAATATATCTTGGATATATATTTACAAAATAGAACAGTAAAT  392

seq1  ATTTTAATATGTTCAGTATTCTTTTGTCCTGGATATAATGATAGCATTTA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATATGTTCAGTATTCTTTTGTCCTGGATATAATGATAGCATTTA  442

seq1  AGACAAATCCTAGAGAATGCTTTTCTTAGTAGATTTTGTGAATCCTCAAA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATCCTAGAGAATGCTTTTCTTAGTAGATTTTGTGAATCCTCAAA  492

seq1  GTTTGGCTTTATGAGTTCCTTAAGTTAATGCTTTATCCACCTGTGCAAAG  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTTTATGAGTTCCTTAAGTTAATGCTTTATCCACCTGTGCAAAG  542

seq1  AAACATGCAACTTTTATTTGGGTACTACTCTAATTGTGATTGTAGAAAAA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCAACTTTTATTTGGGTACTACTCTAATTGTGATTGTAGAAAAA  592

seq1  AATGTAGTAACTGATTATTCAATTAAGAAGTCAGAATAATTAAATATTCA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTAACTGATTATTCAATTAAGAAGTCAGAATAATTAAATATTCA  642

seq1  TTTACTAAGTTGAAATATATACTAAAATGACAAAAATTAGTGCTTTTTAA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAAGTTGAAATATATACTAAAATGACAAAAATTAGTGCTTTTTAA  692

seq1  ACTGTCTTATTTTATGATATAGTTAGTAAATTATTTCTTCAGTGGTTCTG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTTATTTTATGATATAGTTAGTAAATTATTTCTTCAGTGGTTCTG  742

seq1  GTTGTGATTTTAACACAGTATATGTTTTAGAGAGAACATGCATGGAAAAT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGATTTTAACACAGTATATGTTTTAGAGAGAACATGCATGGAAAAT  792

seq1  GTGTGTACAGTTCATTAAGTATTTGAAAATAATAGTCAAGAACTGAGGAA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTACAGTTCATTAAGTATTTGAAAATAATAGTCAAGAACTGAGGAA  842

seq1  TTCCAGACAGCAAGCACTTGGTGAGATGCTCATGGAGTTCTGTTCCCCTG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGACAGCAAGCACTTGGTGAGATGCTCATGGAGTTCTGTTCCCCTG  892

seq1  CACCAGTGTCACCTGCTTTGTCTAATGTAGAACATTTGTTGATGTGCTTT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTGTCACCTGCTTTGTCTAATGTAGAACATTTGTTGATGTGCTTT  942

seq1  TTGAGGTAAAACTGTGTGGAGGAAACTGTGAAATATCTTTGTATGGATAG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTAAAACTGTGTGGAGGAAACTGTGAAATATCTTTGTATGGATAG  992

seq1  ATTATTGATTTGCTCAACATGGAAGTGCTAGGTTTTTTTGTTTTTGTTTT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGATTTGCTCAACATGGAAGTGCTAGGTTTTTTTGTTTTTGTTTT  1042

seq1  AAATAACATTAGAATAGTAAACCATTTAACCTTTTAAGTGGAAATAATGT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACATTAGAATAGTAAACCATTTAACCTTTTAAGTGGAAATAATGT  1092

seq1  TTAGAATATAACAGTGTTCTTCATTGTTTATTTCTCTACTTTTCTCAACC  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATATAACAGTGTTCTTCATTGTTTATTTCTCTACTTTTCTCAACC  1142

seq1  ATAGTAAATTGTGATTCTTTGAAAGGAAAGAATTC  1169
      |||||||||||||||||||||||||||||||||||
seq2  ATAGTAAATTGTGATTCTTTGAAAGGAAAGAATTC  1177