BAC Information

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BAC

Clone NameB6Ng01-308E23
Chromosome13 (Build37)14 (Build37)
Map Location 4,901,004 - 4,901,06291,590,168 - 91,591,236
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneNet1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308E23.bB6Ng01-308E23.g
ACCGA100845GA100846
length2091,060
definitionB6Ng01-308E23.b B6Ng01-308E23.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(4,901,004 - 4,901,062)(91,590,168 - 91,591,236)
sequence
actcctagtcactcccattatcggggtgtaatagtggggtgatgggcaag
caacgaatcaggagctgtcacgccatatcaggtgctgaaacgtcacgctg
cgggttataaaagcagagccattttctcagttcgggatcttcctgagaag
caagcaataaagcttttgctgcagaagattctggtttgttgtgtctttct
tgccggtcg
gaattctcttctaattaattgaataataaagatgacaggaagacaatcac
tgggacaggaggagtttcgccttctgggtccaagagaggaataggaaagg
caagaggaggcacttccttctggacaacaagggtagtgaagcagacaaaa
tgtaggccaacggcagtttgatctagtggtgtggaatccatcaggatcca
ccaacagatttctagcatagaatagttgatgaatttaggatgatagattc
tgcctccagcgattatgttatctgttgattctaaattaagattgtctgga
gtttcctattccacggagttgagcaagagggaaagaacagctcaggtgga
gttcggcctggctttgggacaggaagattaggcaaggactgagctccaag
gactggccagctatagcatgaattggtttttaataattacacgctacaag
gccatatatttctattcaatgaagctaattcttcaaaaataaatgatata
ttttgaatatcacccaccacaaaagcacatcatctaacaactaaaacttt
ttagtgtattgactggaaagcaggtctgtggtatgtgggccaaaagaatg
aggtaggttgtagaataacattatacttgtttacctctcattctctcctg
tattttcttttatttgttttagcaacttcaatcattttgactgtagtaac
ataagaatcttaaaataaatttaatttgaatttccctgatagctaaagat
gctgaatttttttaaaaaaaatatgtttcatccatttgcatttaatcttt
tgataacattttgttcagttctatgtcctgttttagttacttttttcttg
atgtttaactttttgtgttatttttatattccagataccactcctttgtc
tgagttatagtttgcaaactgtattttcacatggtgtggaccatatcttc
acacaagtgatgggtatgttttgttgaacgaagctcttaacttgtgaatc
ccattactatgtatataatcctgcgtagtgggaatagtgttcagaaagtt
ccttctgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4901004_4901062
seq2: B6Ng01-308E23.b_204_261 (reverse)

seq1  CGACCGGCCAGGAAAGACGCAACAAACCGGAATCTTCTGCGGCAAAAGCT  50
      ||||||| || ||||||| ||||||||| ||||||||||| |||||||||
seq2  CGACCGG-CAAGAAAGACACAACAAACCAGAATCTTCTGCAGCAAAAGCT  49

seq1  TTATTGCTT  59
      |||||||||
seq2  TTATTGCTT  58

seq1: chr14_91590168_91591236
seq2: B6Ng01-308E23.g_67_1126 (reverse)

seq1  GCACAGGAAAGAACTTTCTGAACACTA-TCCCACTACCGCAGGGATTAAT  49
      ||||| ||| ||||||||||||||||| |||||||| |||| ||||| ||
seq2  GCACA-GAAGGAACTTTCTGAACACTATTCCCACTA-CGCA-GGATT-AT  46

seq1  ATTAACAATTAGTAAATGGGATTTCACAAGTTAAGGAGCTTCGGTTCAAC  99
      ||  |||  |||| ||||||| |||||||||||| ||||||| |||||||
seq2  AT--ACA--TAGT-AATGGGA-TTCACAAGTTAA-GAGCTTC-GTTCAAC  88

seq1  AAAACATA-CCATCACTTGTGTGAAGATATGGTCCACACCATGTGAAAAT  148
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATACCCATCACTTGTGTGAAGATATGGTCCACACCATGTGAAAAT  138

seq1  ACAGTTTGC-AACTATAACTCAGACAAAGGAGTGGTATCTGGAATATAAA  197
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGCAAACTATAACTCAGACAAAGGAGTGGTATCTGGAATATAAA  188

seq1  AATAACACAAAAAGTTAAACATCAAGAAAAAAGTAACTAAAACAGGACAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACACAAAAAGTTAAACATCAAGAAAAAAGTAACTAAAACAGGACAT  238

seq1  AGAACTGAACAAAATGTTATCAAAAGATTAAATGCAAATGGATGAAACAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGAACAAAATGTTATCAAAAGATTAAATGCAAATGGATGAAACAT  288

seq1  ATTTTTTTTAAAAAAATTCAGCATCTTTAGCTATCAGGGAAATTCAAATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTAAAAAAATTCAGCATCTTTAGCTATCAGGGAAATTCAAATT  338

seq1  AAATTTATTTTAAGATTCTTATGTTACTACAGTCAAAATGATTGAAGTTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATTTTAAGATTCTTATGTTACTACAGTCAAAATGATTGAAGTTG  388

seq1  CTAAAACAAATAAAAGAAAATACAGGAGAGAATGAGAGGTAAACAAGTAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACAAATAAAAGAAAATACAGGAGAGAATGAGAGGTAAACAAGTAT  438

seq1  AATGTTATTCTACAACCTACCTCATTCTTTTGGCCCACATACCACAGACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATTCTACAACCTACCTCATTCTTTTGGCCCACATACCACAGACC  488

seq1  TGCTTTCCAGTCAATACACTAAAAAGTTTTAGTTGTTAGATGATGTGCTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCAGTCAATACACTAAAAAGTTTTAGTTGTTAGATGATGTGCTT  538

seq1  TTGTGGTGGGTGATATTCAAAATATATCATTTATTTTTGAAGAATTAGCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTGGGTGATATTCAAAATATATCATTTATTTTTGAAGAATTAGCT  588

seq1  TCATTGAATAGAAATATATGGCCTTGTAGCGTGTAATTATTAAAAACCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAATAGAAATATATGGCCTTGTAGCGTGTAATTATTAAAAACCAA  638

seq1  TTCATGCTATAGCTGGCCAGTCCTTGGAGCTCAGTCCTTGCCTAATCTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCTATAGCTGGCCAGTCCTTGGAGCTCAGTCCTTGCCTAATCTTC  688

seq1  CTGTCCCAAAGCCAGGCCGAACTCCACCTGAGCTGTTCTTTCCCTCTTGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCAAAGCCAGGCCGAACTCCACCTGAGCTGTTCTTTCCCTCTTGC  738

seq1  TCAACTCCGTGGAATAGGAAACTCCAGACAATCTTAATTTAGAATCAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCCGTGGAATAGGAAACTCCAGACAATCTTAATTTAGAATCAACA  788

seq1  GATAACATAATCGCTGGAGGCAGAATCTATCATCCTAAATTCATCAACTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACATAATCGCTGGAGGCAGAATCTATCATCCTAAATTCATCAACTA  838

seq1  TTCTATGCTAGAAATCTGTTGGTGGATCCTGATGGATTCCACACCACTAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGCTAGAAATCTGTTGGTGGATCCTGATGGATTCCACACCACTAG  888

seq1  ATCAAACTGCCGTTGGCCTACATTTTGTCTGCTTCACTACCCTTGTTGTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTGCCGTTGGCCTACATTTTGTCTGCTTCACTACCCTTGTTGTC  938

seq1  CAGAAGGAAGTGCCTCCTCTTGCCTTTCCTATTCCTCTCTTGGACCCAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAAGTGCCTCCTCTTGCCTTTCCTATTCCTCTCTTGGACCCAGA  988

seq1  AGGCGAAACTCCTCCTGTCCCAGTGATTGTCTTCCTGTCATCTTTATTAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGAAACTCCTCCTGTCCCAGTGATTGTCTTCCTGTCATCTTTATTAT  1038

seq1  TCAATTAATTAGAAGAGAATTC  1069
      ||||||||||||||||||||||
seq2  TCAATTAATTAGAAGAGAATTC  1060