BAC Information

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BAC

Clone NameB6Ng01-310C23
Chromosome13 (Build37)
Map Location 91,320,542 - 91,321,567
singlet/doubletsinglet
Overlap geneAtg10
Upstream geneLOC624190, EG435376, Rps23
Downstream geneLOC100042959, Ssbp2, LOC666889, Acot12, Zcchc9, Ckmt2, Rasgrf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310C23.bB6Ng01-310C23.g
ACCGA102232GA102233
length1,0261,166
definitionB6Ng01-310C23.b B6Ng01-310C23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctgtagaccagggtggcctcgaactcagaaattcgcctgct
tctgcctcccaagtgctgggattaaaggcgtgcgccaccatcacccagcc
agtgtttacttcttaaaaaggcttagttttgaatttttattaaagtaagt
gtgtgtgtgtgtttgtgtgtgtgtgtttggcatatacatgccacatgtgt
gaaggtgctgtggaggccaaaagagtgttctggatgctgtcaggtggagt
tacagttagctgtgatccacacaaatacggctgctgggaactgtggtcat
ttggaaaagcagcggatcctaagttctacacctgaagctaactgagctca
gactggctatccacctaagagtcccctgcctttccttcctaacatgccag
gattgcaggcactcgccaccacacctggccttcctgtccataattcataa
cattggcataaaagtgtcttttttatgttggctagagaaagtaaagaaga
ctcatttgtttcactggatatgacacttggaagtagactttaggattacc
caaattctggttattgctgagaaaggcttttccatcattcagagagtgat
aaataaatgctcctctctttggagcatttgcctggggctggagaagagat
ggagggcaactgcactcatcagactgtaccaagaaaagataagatttctc
acagtatttccaaattctctccgatacaccctgctgtacttttcaaatgt
gaatttttatgcatgtgaaaagggtcaagcagtgaattgattattgtgac
aatctagaaggctaagacaagaatgccagctccaacaggtcccagagtgt
cagctaagagacttcaggcaatgatgtggagagttagggctggcattaaa
cacgtagaatgaagcccattactcatgtgcttccttactaaaatgttgat
ttaaaccaatataaaacaaccagagtgggaacagttctgggcttaaggaa
gtgaagttacaagtgggggcaggcat
gaattccatgcatcctatcagatcaccatggcctaaggctggtcttcaat
aacagcaaaaacaacataaatcccatatggaaactgaacaactctctact
caatgataacttggtcagggaagaaataaagaaagaaattaaagaatttc
tagaatttaaggaaaaggctgatacatcattcccaaacttatgggacaca
atgaaaacagtgctaagaggaaaaatcatagcactaagagctctggtaaa
gaaactggagagatcttaaactagcaatttaatagcacatctgagagctc
tagaacaaaaggaagcaaatacacccaagaggagtagaaggcaagaaata
gtcaaacttagggctgaaatcaaccaaatagaaacaaagagaacaataca
aagaatcaacaaaaccaaaaagctggttctttgagagaatcagcaagata
aataaacccctagccaaactaactaaagggccaagaggcaattaacaaaa
tcagaaatgaaaagggagacataacaacagaaagggaggaaattcaaaat
atcatcagatcctactataaaagcctatatattcaacaaaactggaaaat
ctagatgaaatgggtggttttatacacagataccacatatcaaagttaaa
taaagagcaggtaaactatctaaacaggcccatatcccataaggaaatag
aagtccttaaaaaccagggccagatggatttagtgcagaattctaccaga
ccttcagagaacacctgataccaaaattcctcaaactgttccataaaata
gaaacagaaggaatactacctaattcattctctgaagccacaattactga
tacctaagccacacaaggatccaaccaaaaaagaatttcagaccaatctc
acttatgaaaatcgattcaaaaatactcaataaaattcttgcaaaccaga
tccaagaacacatttaaaccatcattcatcacatcagtaggcttcatcca
ggatgcactgttcatatatgaaatctattatgtatccactatataaacaa
agtcaaggaaaaaactacattgatcatatcctagatgcagaaagcaattg
gacaaattgcagcctgatccatgtgaagatgaaagaattctggaaattcc
aagctctcataactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_91320542_91321567
seq2: B6Ng01-310C23.b_43_1068 (reverse)

seq1  ATGCCTG-CCCCACTTGTAACTTCACTTCCTTAAG-CCAGAACTGTTCCC  48
      ||||||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGCCTGCCCCCACTTGTAACTTCACTTCCTTAAGCCCAGAACTGTTCCC  50

seq1  ACTCCTGGTTGTTTTTATATT-GTTTTAATCAACATTTTAGTAAGGAAGC  97
      ||| ||||||| ||||||||| |||| |||||||||||||||||||||||
seq2  ACT-CTGGTTG-TTTTATATTGGTTTAAATCAACATTTTAGTAAGGAAGC  98

seq1  ACATGAAGTAATGGGCTTCATTCTACGTGTTTAATGCCAGCCCTAACTCT  147
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATG-AGTAATGGGCTTCATTCTACGTGTTTAATGCCAGCCCTAACTCT  147

seq1  CCACATCATTGCCTGAAGTCTCTTAGCTGACACTCTGGGACCTGTTGGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCATTGCCTGAAGTCTCTTAGCTGACACTCTGGGACCTGTTGGAG  197

seq1  CTGGCATTCTTGTCTTAGCCTTCTAGATTGTCACAATAATCAATTCACTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATTCTTGTCTTAGCCTTCTAGATTGTCACAATAATCAATTCACTG  247

seq1  CTTGACCCTTTTCACATGCATAAAAATTCACATTTGAAAAGTACAGCAGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCCTTTTCACATGCATAAAAATTCACATTTGAAAAGTACAGCAGG  297

seq1  GTGTATCGGAGAGAATTTGGAAATACTGTGAGAAATCTTATCTTTTCTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCGGAGAGAATTTGGAAATACTGTGAGAAATCTTATCTTTTCTTG  347

seq1  GTACAGTCTGATGAGTGCAGTTGCCCTCCATCTCTTCTCCAGCCCCAGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTCTGATGAGTGCAGTTGCCCTCCATCTCTTCTCCAGCCCCAGGC  397

seq1  AAATGCTCCAAAGAGAGGAGCATTTATTTATCACTCTCTGAATGATGGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCCAAAGAGAGGAGCATTTATTTATCACTCTCTGAATGATGGAA  447

seq1  AAGCCTTTCTCAGCAATAACCAGAATTTGGGTAATCCTAAAGTCTACTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTCTCAGCAATAACCAGAATTTGGGTAATCCTAAAGTCTACTTC  497

seq1  CAAGTGTCATATCCAGTGAAACAAATGAGTCTTCTTTACTTTCTCTAGCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTCATATCCAGTGAAACAAATGAGTCTTCTTTACTTTCTCTAGCC  547

seq1  AACATAAAAAAGACACTTTTATGCCAATGTTATGAATTATGGACAGGAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAAAAAGACACTTTTATGCCAATGTTATGAATTATGGACAGGAAG  597

seq1  GCCAGGTGTGGTGGCGAGTGCCTGCAATCCTGGCATGTTAGGAAGGAAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTGTGGTGGCGAGTGCCTGCAATCCTGGCATGTTAGGAAGGAAAG  647

seq1  GCAGGGGACTCTTAGGTGGATAGCCAGTCTGAGCTCAGTTAGCTTCAGGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGACTCTTAGGTGGATAGCCAGTCTGAGCTCAGTTAGCTTCAGGT  697

seq1  GTAGAACTTAGGATCCGCTGCTTTTCCAAATGACCACAGTTCCCAGCAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACTTAGGATCCGCTGCTTTTCCAAATGACCACAGTTCCCAGCAGC  747

seq1  CGTATTTGTGTGGATCACAGCTAACTGTAACTCCACCTGACAGCATCCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTTGTGTGGATCACAGCTAACTGTAACTCCACCTGACAGCATCCAG  797

seq1  AACACTCTTTTGGCCTCCACAGCACCTTCACACATGTGGCATGTATATGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCTTTTGGCCTCCACAGCACCTTCACACATGTGGCATGTATATGC  847

seq1  CAAACACACACACACAAACACACACACACACTTACTTTAATAAAAATTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACACACACACAAACACACACACACACTTACTTTAATAAAAATTCA  897

seq1  AAACTAAGCCTTTTTAAGAAGTAAACACTGGCTGGGTGATGGTGGCGCAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGCCTTTTTAAGAAGTAAACACTGGCTGGGTGATGGTGGCGCAC  947

seq1  GCCTTTAATCCCAGCACTTGGGAGGCAGAAGCAGGCGAATTTCTGAGTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATCCCAGCACTTGGGAGGCAGAAGCAGGCGAATTTCTGAGTTC  997

seq1  GAGGCCACCCTGGTCTACAGAGTGAATTC  1026
      |||||||||||||||||||||||||||||
seq2  GAGGCCACCCTGGTCTACAGAGTGAATTC  1026