BAC Information

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BAC

Clone NameB6Ng01-312A03
Chromosome13 (Build37)
Map Location 80,499,349 - 80,500,323
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312A03.bB6Ng01-312A03.g
ACCGA103585GA103586
length976492
definitionB6Ng01-312A03.b B6Ng01-312A03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacaccactcactgtctccttatctggtaggtattatctctgt
tctgtatttgaggtaacttacactcatgagcaattttgatgatatttgcc
atcattagtttggggtgagaatgcagtcacatgccgtttccacacatgat
ttcaaacctgataagtatttgtattttattcttttatctcaaaactgctg
ttttgcttggttaggttcattttatgtttcattttgaccattagaaatct
gacatgtaactatttagtcattggtaattatgtacttgatattgaatggt
taagataggaatggctatgttttgtgaaaattactctacaagaaacatgg
acaattatttaaatggtatgcaaaagcagtctttggtaggaccaaagaga
aacatactgaaacatttggaatttttttatgtgtatcctacagggtgaga
taattatgttattggcttaaatttcggtgcgtatattttgtggaccatta
ttactactctgcctttatatcttcctcacattctgagtgtcctgaatact
tgtcgggcattgaaatccattgcctttcattagcagttctccttatcttc
aatgactactatggaaagggtaaagtattccaatagaatcacaaacagga
tatttggactcctttcctaaacactactcatttccaatattccttgactt
tgaagcactatgaaatcaggactccttgtctgcaggatgatttacttgtt
atataaaaagtaaatatttacattgtagtcattgcttccgcaaaatgagc
ccctaccacagttctgcatcacattcctcctctcctttgcctcctagagg
gagctccccgctcatgagacctctgcactatccctggggccccaagactc
ttcagtaaaagcgcatctcctcacactgagagctgacccagaacatctct
gctgtactttgaacatggggatctga

gaattctcacctgatgagtaccgaatggctgagaagcaccttacaaaatg
ttcagaatccttaataatcaggtatatgtaaatcaaaacaaaccctgaga
ttccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggtgaggatgtggagaaagaggaacactcctccatgcttgtg
ggattgcaagcttgtacaaccactctgaaatccgtctggcagttccttac
aaaattggacatagtactaccagaggatcccacaataactctcctgggca
tatatccagatgatgttccaactggtaagaaagacacatgctccactatg
ttcatagcatccttatttataatatccagaagctggaaggaacccaaatg
cccctcaacaaaggaatggatacggaaaatgtggtacatttacacaatgg
agtactactcagctgtaaaaaaagaattaatttatgaaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80499349_80500323
seq2: B6Ng01-312A03.b_44_1019 (reverse)

seq1  TCAGAGCCCCATCTCACAAATACAGCAGAGATCTTCCTTGTCAGCCCCCA  50
      ||||| |||||| |   || |||||||||||| |||   |||||| | ||
seq2  TCAGATCCCCATGTTCAAAGTACAGCAGAGATGTTCTGGGTCAGCTCTCA  50

seq1  GTGGGAGGAGATGCGCTTATTCCTGGAGAGACTTGGGGCCCCAGGGA-AG  99
      ||| |||||||||||||| || ||| |||| |||||||||||||||| ||
seq2  GTGTGAGGAGATGCGCTT-TTACTGAAGAGTCTTGGGGCCCCAGGGATAG  99

seq1  TGGGGAGGTCTGATGAGTGGGGAGCACCCTCTCTGAGGCAAAGGAGAGGA  149
      ||  ||||||| ||||| ||||||| ||||||  ||||||||||||||||
seq2  TGCAGAGGTCTCATGAGCGGGGAGCTCCCTCTAGGAGGCAAAGGAGAGGA  149

seq1  GGAATGGGATGAAGAACTGTGGGAGGGGCGTACTTAGAGGAAGCAATGAC  199
      |||||| |||| |||||||||| ||||||  | || | ||||||||||||
seq2  GGAATGTGATGCAGAACTGTGGTAGGGGCTCATTTTGCGGAAGCAATGAC  199

seq1  TACAATGTAAATATTTACTTTTTAAAAAACAAGTAAATGTGAAGGTAGAC  249
      |||||||||||||||||||||||| | |||||||||||      | ||||
seq2  TACAATGTAAATATTTACTTTTTATATAACAAGTAAATCATCCTGCAGAC  249

seq1  AAGAAATAATAAACTGATAGTGGCTGAAAGTCAAGGAATTTTGAAAATGA  299
      ||| | |  | |  | ||||||  | ||||||||||||| ||| ||||||
seq2  AAGGAGTCCTGATTTCATAGTGCTTCAAAGTCAAGGAATATTGGAAATGA  299

seq1  GTAGTACTTAGGAATGGAGACCAAATATCCTCTTTGTGATTCT-TTTTAA  348
      |||||  ||||||| |||| ||||||||||| ||||||||||| ||  ||
seq2  GTAGTGTTTAGGAAAGGAGTCCAAATATCCTGTTTGTGATTCTATTGGAA  349

seq1  TACTTTACCCTTTCCATAGTAGTCATTGAAGAAAAGGAGAACTGCTAACG  398
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  TACTTTACCCTTTCCATAGTAGTCATTGAAGATAAGGAGAACTGCTAATG  399

seq1  AAAGGCACTGGATTTCAATGCCCGACAAGTACTCAGGACACTCAGAATGT  448
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAGGCAATGGATTTCAATGCCCGACAAGTATTCAGGACACTCAGAATGT  449

seq1  GAGGAAGATATAAACGCAGAGTAGTAATAATGGTCCACAAAATATAAGCA  498
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  GAGGAAGATATAAAGGCAGAGTAGTAATAATGGTCCACAAAATATACGCA  499

seq1  CAGAAATCTAAGACAATAACATACTTATCTCACCCTGTAGGATACACATA  548
      | ||||| |||| |||||||||| ||||||||||||||||||||||||||
seq2  CCGAAATTTAAGCCAATAACATAATTATCTCACCCTGTAGGATACACATA  549

seq1  AAAAAATTCCAAATGTTTCAGTATGTTTCTCTTTGGTCTTACCAAAGACT  598
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAAAATTCCAAATGTTTCAGTATGTTTCTCTTTGGTCCTACCAAAGACT  599

seq1  GCTTTTGCATACCATTTAAATACTTGTCCATGTTTCTTGAAGAGTAATCT  648
      |||||||||||||||||||||| |||||||||||||||| |||||||| |
seq2  GCTTTTGCATACCATTTAAATAATTGTCCATGTTTCTTGTAGAGTAATTT  649

seq1  TTACAAAACATAGCCATTACTATCTTAACAACTCAATAACAAGTACATAA  698
      | |||||||||||||||| |||||||||| | |||||| |||||||||||
seq2  TCACAAAACATAGCCATTCCTATCTTAACCATTCAATATCAAGTACATAA  699

seq1  TTACCAATGACTAAATAGTTACATGTCCTATTTCTAATGGTCAAAATGAA  748
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  TTACCAATGACTAAATAGTTACATGTCAGATTTCTAATGGTCAAAATGAA  749

seq1  ACATAAAATGAACCTAACCAAGCAAAACAACAGTTTTGAGATAAAAGAAT  798
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACATAAAATGAACCTAACCAAGCAAAACAGCAGTTTTGAGATAAAAGAAT  799

seq1  AAAATACAAATAATTATCAGCTTTGAAATCATGTGTGGAAATGGTATGTG  848
      |||||||||||| ||||||| |||||||||||||||||||| || |||||
seq2  AAAATACAAATACTTATCAGGTTTGAAATCATGTGTGGAAACGGCATGTG  849

seq1  ACTGCATTCTCACCCCAAACTAATGATGGCAAATATCATCAAAATTGCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATTCTCACCCCAAACTAATGATGGCAAATATCATCAAAATTGCTC  899

seq1  ATGAGTCTAAGTTACCTCCTATACAGAACAGAGATAATACCTACCAGATA  948
      |||||| |||||||||||  ||||||||||||||||||||||||||||||
seq2  ATGAGTGTAAGTTACCTCAAATACAGAACAGAGATAATACCTACCAGATA  949

seq1  AGGAGACAGTGAGTGCTGTATGAATTC  975
      ||||||||||||||| |||||||||||
seq2  AGGAGACAGTGAGTGGTGTATGAATTC  976


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