BAC Information

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BAC

Clone NameB6Ng01-312G10
Chromosome13 (Build37)
Map Location 71,673,814 - 71,674,915
singlet/doubletsinglet
Overlap genenone
Upstream geneBC018507, EG620473, Adamts16, 8030423J24Rik, LOC627230
Downstream geneLOC100042360, Irx1, LOC100042828, LOC100042832, LOC100042836
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312G10.bB6Ng01-312G10.g
ACCGA103880GA103881
length1,1921,096
definitionB6Ng01-312G10.b B6Ng01-312G10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaacgtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcctactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccccaaaaattccaccagagaactcctaaacc
tgataaacagcttgggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattat
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcaaaagatggaaggatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaattttcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatctttgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaatttggtgctg
gcacaactgggttgttatcatgtagaagaatgcgaatcgatccatactat
ctccttgtactaaaggtcaatctagtggatcaggaacttcacttaaaccc
agagaacactgaacttatagaggagaaagtggggaaagcctgaagatatg
gcaccagggaaaatctgaacagaacagcatgcttggctgtaagatggaat
ggacattggaacctatgaaacctcccaaagattttctgtcga
gaattctaatattgttcaggtataactgtaagaaaggacattaatgcaga
aataatacaaagggacctgacagactaatattctcccagccttgtttcag
aaaggattggatctgaattaatgacattaagttgtaaggacagtgagctg
taacatggctgaggtgtaaatgtttgctgtaaaatgggaacggtggcttt
gagatgggagtaaggaggtagatgacgaactgggagaagcaggtgctgac
tgcaaacataaaccagcaatcacggactgcgcacaaacacgtaaaacacc
aattcaaccaggcatagccctaaaaggaaatattcagaagaacttactac
aacttggtttcttcctgctcacttcccatgtgtgacaggaacagtgtccc
ttttgaatgtgagactgtcttggagaagagctgttaccctctgccctggc
taaggacaggaagactcctcatgtcagcatcattcatatactagaaggag
gcaaaggcttcaaaacacatgccgaaatccagtcaagctgtcacatctac
atatgggaaaagtgatgctggcctaagcatctttcagatgctccactggt
aaactcatgaggacaaatggctgctaggagagccacatagttaggaggct
atactcctttaccatctttcctggggtctgtcaagtctacaggaaaacac
ttgctgccttcctgaggctacttggatgtaagtcggggactgcttccttt
taaataagatctggtacccaggtcagggtgctgcttccagcctagggagg
ataaggacagatggtggtcttatatttgggtaagtgtgagtttgctttgg
tataccggtagccacaaatcatcatgaaagggagattaagaggagaaagg
ctgctaaactgcacatacacatatctatccccaccattcagagagctttg
catcaccaccataattctcagatgatggggaagtgataagcccctttgca
cagagatttctgcaatacttttgcatataaaatgctttggtttagactga
ctgaatacctgaggctcatggtgaacataatttcctttttcttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_71673814_71674915
seq2: B6Ng01-312G10.g_67_1162 (reverse)

seq1  AAAAAGAAAAAAGAAAATATGTTCA-CATGAGCTTCAGTATTTAAGTCAG  49
      ||||||||||| |||| |||||||| ||||||| ||||   || ||||||
seq2  AAAAAGAAAAAGGAAATTATGTTCACCATGAGCCTCAGGTATTCAGTCAG  50

seq1  TCTAAACCAAAGCATTTTATATGCAAAAGTATTTGCAAGGAAATCCTCTG  99
      ||||||||||||||||||||||||||||||| |||||  ||||| |||||
seq2  TCTAAACCAAAGCATTTTATATGCAAAAGTA-TTGCA--GAAAT-CTCTG  96

seq1  TGCATAGGGGCTTATCACTTTCCCCATCATCTGGAGAATTATGGTGGTGA  149
      |||| ||||||||||||| ||||||||||||| |||||||||||||||||
seq2  TGCAAAGGGGCTTATCAC-TTCCCCATCATCT-GAGAATTATGGTGGTGA  144

seq1  TGCAAAGCTCTTCTGAATGGTGGGGATAGATATGTGTATGTGCAGTTTAG  199
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGCTC-TCTGAATGGTGGGGATAGATATGTGTATGTGCAGTTTAG  193

seq1  CAGCCTTTCTCCTCTTAATCTCCCTTTCATGATGATTTGTGGCTACCGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTCTCCTCTTAATCTCCCTTTCATGATGATTTGTGGCTACCGGT  243

seq1  ATACCAAAGCAAACTCACACTTACCCAAATATAAGACCACCATCTGTCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAAGCAAACTCACACTTACCCAAATATAAGACCACCATCTGTCCT  293

seq1  TATCCTCCCTAGGCTGGAAGCAGCACCCTGACCTGGGTACCAGATCTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCCCTAGGCTGGAAGCAGCACCCTGACCTGGGTACCAGATCTTAT  343

seq1  TTAAAAGGAAGCAGTCCCCGACTTACATCCAAGTAGCCTCAGGAAGGCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGAAGCAGTCCCCGACTTACATCCAAGTAGCCTCAGGAAGGCAG  393

seq1  CAAGTGTTTTCCTGTAGACTTGACAGACCCCAGGAAAGATGGTAAAGGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTTTCCTGTAGACTTGACAGACCCCAGGAAAGATGGTAAAGGAG  443

seq1  TATAGCCTCCTAACTATGTGGCTCTCCTAGCAGCCATTTGTCCTCATGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCTCCTAACTATGTGGCTCTCCTAGCAGCCATTTGTCCTCATGAG  493

seq1  TTTACCAGTGGAGCATCTGAAAGATGCTTAGGCCAGCATCACTTTTCCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAGTGGAGCATCTGAAAGATGCTTAGGCCAGCATCACTTTTCCCA  543

seq1  TATGTAGATGTGACAGCTTGACTGGATTTCGGCATGTGTTTTGAAGCCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGATGTGACAGCTTGACTGGATTTCGGCATGTGTTTTGAAGCCTT  593

seq1  TGCCTCCTTCTAGTATATGAATGATGCTGACATGAGGAGTCTTCCTGTCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTTCTAGTATATGAATGATGCTGACATGAGGAGTCTTCCTGTCC  643

seq1  TTAGCCAGGGCAGAGGGTAACAGCTCTTCTCCAAGACAGTCTCACATTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAGGGCAGAGGGTAACAGCTCTTCTCCAAGACAGTCTCACATTCA  693

seq1  AAAGGGACACTGTTCCTGTCACACATGGGAAGTGAGCAGGAAGAAACCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGACACTGTTCCTGTCACACATGGGAAGTGAGCAGGAAGAAACCAA  743

seq1  GTTGTAGTAAGTTCTTCTGAATATTTCCTTTTAGGGCTATGCCTGGTTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGTAAGTTCTTCTGAATATTTCCTTTTAGGGCTATGCCTGGTTGA  793

seq1  ATTGGTGTTTTACGTGTTTGTGCGCAGTCCGTGATTGCTGGTTTATGTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGTTTTACGTGTTTGTGCGCAGTCCGTGATTGCTGGTTTATGTTT  843

seq1  GCAGTCAGCACCTGCTTCTCCCAGTTCGTCATCTACCTCCTTACTCCCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGCACCTGCTTCTCCCAGTTCGTCATCTACCTCCTTACTCCCAT  893

seq1  CTCAAAGCCACCGTTCCCATTTTACAGCAAACATTTACACCTCAGCCATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCCACCGTTCCCATTTTACAGCAAACATTTACACCTCAGCCATG  943

seq1  TTACAGCTCACTGTCCTTACAACTTAATGTCATTAATTCAGATCCAATCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTCACTGTCCTTACAACTTAATGTCATTAATTCAGATCCAATCC  993

seq1  TTTCTGAAACAAGGCTGGGAGAATATTAGTCTGTCAGGTCCCTTTGTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAACAAGGCTGGGAGAATATTAGTCTGTCAGGTCCCTTTGTATT  1043

seq1  ATTTCTGCATTAATGTCCTTTCTTACAGTTATACCTGAACAATATTAGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGCATTAATGTCCTTTCTTACAGTTATACCTGAACAATATTAGAA  1093

seq1  TTC  1102
      |||
seq2  TTC  1096