BAC Information

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BAC

Clone NameB6Ng01-314B21
Chromosome13 (Build37)
Map Location 76,568,166 - 76,569,235
singlet/doubletsinglet
Overlap geneMctp1
Upstream geneLOC672443, LOC666764, LOC100042606, LOC100042986, Ell2, LOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276
Downstream geneLOC666603, EG666607, Ankrd32, 2210408I21Rik, LOC631139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314B21.bB6Ng01-314B21.g
ACCGA105147GA105148
length1,1901,058
definitionB6Ng01-314B21.b B6Ng01-314B21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggccagcctgggacaaatcaggatctaggtgaagaaaagctt
aaatccaggtgtggtggtacacacctttaatcccagcattacaggaaaca
gacttaagcagatctctgaactcaaggtcaatctacagagcaagttccag
gaaagtcaagcttaggagtttgaaaacagaaagctggtaatagaataagg
ggagcatattcctgctccagcaagcaccagaacttggcaggctcagccat
ttggctctggctttagagtggacaatagaagggaccactgggacaattga
tgctggttatctggagctaataattgagtggtgattaagaagagaccagc
atcaccgaggtgaaatcttctgggaaatgtttttctgagagcacaaagaa
gctgtattccagagatagctaacgttgtacctcatgctacagctacactt
ggtaatatgtaagagttacccaggtagtactggttttgaagacatgaatg
gggtcatgaagaggacccgaggctcagcactgagaggccatggaaggccg
ctggtgaaagtgcagcctcagttatagttgatggcccaggactgaagggg
tcatgcaaaggatttgaggcttggcactataaagagagcccatgaaaggc
tataggtgaagcctagttgcaaacctcagcctatttggagatgccagtac
catgggatgataaccaagtcgaagttgggtggatcaacctgagcttagag
tgctacagagggaagagctggagaagtgatgttagtcctttggaggagcc
cagaaaatcatgtgtggatcccagacattggaacaagaagctataaaatt
aaagttgacttggagaccccaagttattcaaaatgccagagccgtagcta
cctgctaaggaaagctgctaacagggagtggaacacgcccaggagaaaga
gcatgtagcagtcaacagagatgaaaaaggagttggagatctgaaactgc
tttgacaacagacatggagatgcttagtttggagtttgtccagctggttt
ctgtctgattcgggattaacagtaatgatcgatggattctcagtaagacc
ttttgactttggacaattaacaatagctatagacctatggggaacgttgg
caagcttgggctaaatgttgtaccttctgtcttcaaatac
gaattcatatctgtgatagctaattgccaatttgacacaatctagaatca
cctacagaaagagaacaaatgaggacttatctggaaaggtttggcctagg
aacaggtctgtgagagcctatagatctccttaattgttgtgggaagaccc
agcctgacagtcagtggcaccattcctgggtttgagcccagaattgtata
agagtagagaaagcaagctgagcactatgcatgcatgtgttgacttctcc
ctgctcttgactgtgaatgtgacatgacttactgcttgtcaccctgctat
gatgtacccacagtgaaggactaaagcctagaactgtgggctaaaagaac
cctttctcatctacactgactttggtcagggtgttttatcacagcaatag
aagaactatgacaagagtcttgattcactcaccccttagagcctttgttc
tccttagtctgtggccaaggtctatagttcacatgaaatcaagctacagc
tgaacttgatttgccataacaagtggatttaagaactgcaaaaacaactg
caaaattgtgttagttgtgttaatgtaaaattgttcgcttcttccacttt
aaaaattactttacatattttccctggatttccctgtggcggtcatgctg
caaggctgctctgctaaggcctggtcacctctgatagattggctcactct
gtagcaccttacttttcttcttcacacctaactgatgctttattattccc
aaatgagggcactgctcacagatcctgggattgttgtgtagtgtttcctc
atggagagtctgctgtctgtcgtaaagaactctgcagactatagtttatc
atttcagcttaatcttcctttatactctacacatttttcctgtgtaactt
tttaactgtataatcatgtttatccaaagcatatatgtgcttcataaagt
gccagctcacaatgtatccctcatatgtatcaactgtcatctatttcttt
tttcccttacattttttgcattacatcagatgaaaacagagattattcat
ctcaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_76568166_76569235
seq2: B6Ng01-314B21.g_66_1123 (reverse)

seq1  TTTTTGAGATGAAATTATTCTTCTGTTTTCATCTTGGATGTTAAATGCCA  50
      |||||||||||||  || || |||||||||||||  |||||  |||| ||
seq2  TTTTTGAGATGAA--TAATC-TCTGTTTTCATCT--GATGT--AATG-CA  42

seq1  AAAAATGTAAGGG-AAAAAGAAATAGATGGACAGGTTGGATACATATGAG  99
      ||||||||||||| |||||||||||||| |||||  | ||||||||||||
seq2  AAAAATGTAAGGGAAAAAAGAAATAGAT-GACAG--TTGATACATATGAG  89

seq1  GGATAACATTGTGAGCTGGCAACTTTATGAAGCACATATATGCTTTGGAT  149
      |||| ||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGAT-ACATTGTGAGCTGGC-ACTTTATGAAGCACATATATGCTTTGGAT  137

seq1  AAACATGATTATACAGTTAAAAAGTTACACAGGAAAAATGTGTAGAGTAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGATTATACAGTTAAAAAGTTACACAGGAAAAATGTGTAGAGTAT  187

seq1  AAAGGAAGATTAAGCTGAAATGATAAACTATAGTCTGCAGAGTTCTTTAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGATTAAGCTGAAATGATAAACTATAGTCTGCAGAGTTCTTTAC  237

seq1  GACAGACAGCAGACTCTCCATGAGGAAACACTACACAACAATCCCAGGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGCAGACTCTCCATGAGGAAACACTACACAACAATCCCAGGAT  287

seq1  CTGTGAGCAGTGCCCTCATTTGGGAATAATAAAGCATCAGTTAGGTGTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCAGTGCCCTCATTTGGGAATAATAAAGCATCAGTTAGGTGTGA  337

seq1  AGAAGAAAAGTAAGGTGCTACAGAGTGAGCCAATCTATCAGAGGTGACCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAAGTAAGGTGCTACAGAGTGAGCCAATCTATCAGAGGTGACCA  387

seq1  GGCCTTAGCAGAGCAGCCTTGCAGCATGACCGCCACAGGGAAATCCAGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTAGCAGAGCAGCCTTGCAGCATGACCGCCACAGGGAAATCCAGGG  437

seq1  AAAATATGTAAAGTAATTTTTAAAGTGGAAGAAGCGAACAATTTTACATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTAAAGTAATTTTTAAAGTGGAAGAAGCGAACAATTTTACATT  487

seq1  AACACAACTAACACAATTTTGCAGTTGTTTTTGCAGTTCTTAAATCCACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACTAACACAATTTTGCAGTTGTTTTTGCAGTTCTTAAATCCACT  537

seq1  TGTTATGGCAAATCAAGTTCAGCTGTAGCTTGATTTCATGTGAACTATAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGGCAAATCAAGTTCAGCTGTAGCTTGATTTCATGTGAACTATAG  587

seq1  ACCTTGGCCACAGACTAAGGAGAACAAAGGCTCTAAGGGGTGAGTGAATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGCCACAGACTAAGGAGAACAAAGGCTCTAAGGGGTGAGTGAATC  637

seq1  AAGACTCTTGTCATAGTTCTTCTATTGCTGTGATAAAACACCCTGACCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCTTGTCATAGTTCTTCTATTGCTGTGATAAAACACCCTGACCAA  687

seq1  AGTCAGTGTAGATGAGAAAGGGTTCTTTTAGCCCACAGTTCTAGGCTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGTAGATGAGAAAGGGTTCTTTTAGCCCACAGTTCTAGGCTTTA  737

seq1  GTCCTTCACTGTGGGTACATCATAGCAGGGTGACAAGCAGTAAGTCATGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCACTGTGGGTACATCATAGCAGGGTGACAAGCAGTAAGTCATGT  787

seq1  CACATTCACAGTCAAGAGCAGGGAGAAGTCAACACATGCATGCATAGTGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCACAGTCAAGAGCAGGGAGAAGTCAACACATGCATGCATAGTGC  837

seq1  TCAGCTTGCTTTCTCTACTCTTATACAATTCTGGGCTCAAACCCAGGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTGCTTTCTCTACTCTTATACAATTCTGGGCTCAAACCCAGGAAT  887

seq1  GGTGCCACTGACTGTCAGGCTGGGTCTTCCCACAACAATTAAGGAGATCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCACTGACTGTCAGGCTGGGTCTTCCCACAACAATTAAGGAGATCT  937

seq1  ATAGGCTCTCACAGACCTGTTCCTAGGCCAAACCTTTCCAGATAAGTCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTCTCACAGACCTGTTCCTAGGCCAAACCTTTCCAGATAAGTCCT  987

seq1  CATTTGTTCTCTTTCTGTAGGTGATTCTAGATTGTGTCAAATTGGCAATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTCTCTTTCTGTAGGTGATTCTAGATTGTGTCAAATTGGCAATT  1037

seq1  AGCTATCACAGATATGAATTC  1070
      |||||||||||||||||||||
seq2  AGCTATCACAGATATGAATTC  1058