BAC Information

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BAC

Clone NameB6Ng01-314J15
Chromosome13 (Build37)
Map Location 111,497,012 - 111,633,528
singlet/doubletdoublet
Overlap genenone
Upstream genePde4d, LOC100040577, Rab3c, EG432803, 9830130M13Rik, Plk2
Downstream geneLOC100040614, LOC668159, 4732495G21Rik, LOC100040640, EG621953, Gpbp1, LOC100040666, Mier3, Map3k1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314J15.bB6Ng01-314J15.g
ACCGA105484GA105485
length713400
definitionB6Ng01-314J15.b B6Ng01-314J15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,632,816 - 111,633,528)(111,497,012 - 111,497,417)
sequence
gaattcccctgtgtttgctatgaaaaataaactgggggaaaatggagaat
gttaacaagaagttggaggaagatctaattgcatcttaaaggaaattctt
ataaaacagaaacagcaaagcagagagcctgaccaaccactgtcttacct
gtcagacagaaaatcctggtcaagcaactttcagcagccaaccactggca
ggcctctaagtaggactttaagacagactatgccgaatactgtatcctgc
atcccaaactgggactgcaagcaagcagttcatagagcaaagatggaaag
acttcagagaggaactccagaacacaagatgatagaatataacagagtcc
aagaatataaaaggtgcaggaagcagtaccctagttacagggaagcaaag
aatctctgttagtttcttacctcagttctggatctgctccagatagatca
acagagagatcacatcagacacaggagatacctgcaaaagactctagaca
gaatggaaaatcaacttaaaaagtgcataattaatagctgaaacaaatga
gggcaggggatgtagtgtgaaatatttttatgtacctggccatttaaatg
accttatgcccttcggtgtcagttggctcttagacttttgggaatgggag
tggatataaaaagccaacagaggcctagagtggaaagagtagtaataggg
ggagggaggagtc

catttctaaaggtggcacattcattctacatattcagagttatctgggag
gtctcactgaggtgcaggggtgggaggtgaaagggtggcaacggaggccc
gtcccttggagcattgctgagtctttcgatagaaatttcgggctattact
tcagctaccagtgcacgttcttcatttgaaatcaaaacctgactcatttc
agctccatcgatggaagaagaaagaaagaaaaactgacccaagaaatttt
acaagtgtttccagcctgaacccttgatttactgtgagtcttggaagggt
gtgcaattttgcaagcattggggaaaggtttgagtagcactttccagcaa
actgcaatcgcttgagatttagatctgggagggggtgggggcttggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_111632816_111633528
seq2: B6Ng01-314J15.b_44_756 (reverse)

seq1  GACTCCTCCCTCCCCCTATTACTACTCTTTCCACTCTAGGCCTCTGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTCCCTCCCCCTATTACTACTCTTTCCACTCTAGGCCTCTGTTGG  50

seq1  CTTTTTATATCCACTCCCATTCCCAAAAGTCTAAGAGCCAACTGACACCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATATCCACTCCCATTCCCAAAAGTCTAAGAGCCAACTGACACCG  100

seq1  AAGGGCATAAGGTCATTTAAATGGCCAGGTACATAAAAATATTTCACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCATAAGGTCATTTAAATGGCCAGGTACATAAAAATATTTCACACT  150

seq1  ACATCCCCTGCCCTCATTTGTTTCAGCTATTAATTATGCACTTTTTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCCTGCCCTCATTTGTTTCAGCTATTAATTATGCACTTTTTAAGT  200

seq1  TGATTTTCCATTCTGTCTAGAGTCTTTTGCAGGTATCTCCTGTGTCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCCATTCTGTCTAGAGTCTTTTGCAGGTATCTCCTGTGTCTGAT  250

seq1  GTGATCTCTCTGTTGATCTATCTGGAGCAGATCCAGAACTGAGGTAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTCTCTGTTGATCTATCTGGAGCAGATCCAGAACTGAGGTAAGAA  300

seq1  ACTAACAGAGATTCTTTGCTTCCCTGTAACTAGGGTACTGCTTCCTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGAGATTCTTTGCTTCCCTGTAACTAGGGTACTGCTTCCTGCAC  350

seq1  CTTTTATATTCTTGGACTCTGTTATATTCTATCATCTTGTGTTCTGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATATTCTTGGACTCTGTTATATTCTATCATCTTGTGTTCTGGAGT  400

seq1  TCCTCTCTGAAGTCTTTCCATCTTTGCTCTATGAACTGCTTGCTTGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTGAAGTCTTTCCATCTTTGCTCTATGAACTGCTTGCTTGCAGT  450

seq1  CCCAGTTTGGGATGCAGGATACAGTATTCGGCATAGTCTGTCTTAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTGGGATGCAGGATACAGTATTCGGCATAGTCTGTCTTAAAGTC  500

seq1  CTACTTAGAGGCCTGCCAGTGGTTGGCTGCTGAAAGTTGCTTGACCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTAGAGGCCTGCCAGTGGTTGGCTGCTGAAAGTTGCTTGACCAGGA  550

seq1  TTTTCTGTCTGACAGGTAAGACAGTGGTTGGTCAGGCTCTCTGCTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTCTGACAGGTAAGACAGTGGTTGGTCAGGCTCTCTGCTTTGCT  600

seq1  GTTTCTGTTTTATAAGAATTTCCTTTAAGATGCAATTAGATCTTCCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTTTTATAAGAATTTCCTTTAAGATGCAATTAGATCTTCCTCCA  650

seq1  ACTTCTTGTTAACATTCTCCATTTTCCCCCAGTTTATTTTTCATAGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGTTAACATTCTCCATTTTCCCCCAGTTTATTTTTCATAGCAAA  700

seq1  CACAGGGGAATTC  713
      |||||||||||||
seq2  CACAGGGGAATTC  713


seq1: chr13_111497012_111497417
seq2: B6Ng01-314J15.g_66_471

seq1  GAATTCCATTTCTAAAGGTGGCACATTCATTCTACATATTCAGAGTTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTCTAAAGGTGGCACATTCATTCTACATATTCAGAGTTATC  50

seq1  TGGGAGGTCTCACTGAGGTGCAGGGGTGGGAGGTGAAAGGGTGGCAACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTCTCACTGAGGTGCAGGGGTGGGAGGTGAAAGGGTGGCAACGG  100

seq1  AGGCCCGTCCCTTGGAGCATTGCTGAGTCTTTCGATAGAAATTTCGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCGTCCCTTGGAGCATTGCTGAGTCTTTCGATAGAAATTTCGGGCT  150

seq1  ATTACTTCAGCTACCAGTGCACGTTCTTCATTTGAAATCAAAACCTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCAGCTACCAGTGCACGTTCTTCATTTGAAATCAAAACCTGACT  200

seq1  CATTTCAGCTCCATCGATGGAAGAAGAAAGAAAGAAAAACTGACCCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGCTCCATCGATGGAAGAAGAAAGAAAGAAAAACTGACCCAAGA  250

seq1  AATTTTACAAGTGTTTCCAGCCTGAACCCTTGATTTACTGTGAGTCTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACAAGTGTTTCCAGCCTGAACCCTTGATTTACTGTGAGTCTTGG  300

seq1  AAGGGTGTGCAATTTTGCAAGCATTGGGGAAAGGTTTGAGTAGCACTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGTGCAATTTTGCAAGCATTGGGGAAAGGTTTGAGTAGCACTTTC  350

seq1  CAGCAAACTGCAATCGCTTGAGATTTAGATCTGGGAGGGGGTGGGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAACTGCAATCGCTTGAGATTTAGATCTGGGAGGGGGTGGGGGCTT  400

seq1  GGAGTG  406
      ||||||
seq2  GGAGTG  406


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