BAC Information

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BAC

Clone NameB6Ng01-314J19
Chromosome13 (Build37)
Map Location 69,746,270 - 69,747,076
singlet/doubletsinglet
Overlap geneSrd5a1
Upstream gene1700001L19Rik, Adcy2, LOC666205, LOC218332, Pols, A530095I07Rik
Downstream geneNsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10, EG620143, LOC100042291, 4930520P13Rik, EG633042, BC018507
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314J19.g
ACCGA105492
length814
definitionB6Ng01-314J19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctcataccaaaataacccattgttctgtttaagttttctta
cccaaaactcatccttataactatcatcctcttcagggctacctcttcta
tttgacggtccctttccaccttgcttatatttccctctttatcttcgtag
cttgtgaataatcttatttgttaaaccctccgagatagacaaaaagcagt
ccacttcgcactaaaagaacacatcttgtgttcttctcattttcctaccc
agccccaaacccttcagtttgattttttttcttgtgctctgtatatgtga
cacttagtgacacagagtgggtgaagacaaaagtggccaaggttgaattc
tttcagagaccagtgtttgctgcagatgcatgttcgatcactgtgaagtg
ttttagggaggccctgcatattgctacacaataaatagttctttgcatgg
aatttaataagcccggaggacctaaatttacatttagctattggtatttc
agaaatttcacttaacttggaaattactaaattctgggtgccctccatgc
ataaagaattgaattttgatccccaggagaggagaaagaggatgaaagta
agtgtgaaaatggagagaaataagtccatctcactcagactctattggag
tattatataatttagtataacttttacattttctaacctatatgggtgtg
atgatatactttattcctttaatctcagcactctgaaacttgaaccccga
gaccctgaaaaaaaactttttttcaacttacaagggaaaattccacttta
tttatctatgtata
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_69746270_69747076
seq2: B6Ng01-314J19.g_63_876 (reverse)

seq1  TATACATAGATAAATAAAGT-GAATTTT-CCTTGTAAGTTGAAAAAATG-  47
      |||||||||||||||||||| ||||||| |||||||||||||||||| | 
seq2  TATACATAGATAAATAAAGTGGAATTTTCCCTTGTAAGTTGAAAAAAAGT  50

seq1  TTTTTTTCAGGGTCTCTGGGTTCAAG-TTCAGAGTGCTGAGATTAAAGGA  96
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  TTTTTTTCAGGGTCTCGGGGTTCAAGTTTCAGAGTGCTGAGATTAAAGGA  100

seq1  AT-AAGTATATCATCACACCCATATAGGTTAGAAAATGT-AAAGTTATAC  144
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATAAAGTATATCATCACACCCATATAGGTTAGAAAATGTAAAAGTTATAC  150

seq1  TAAATTATATAATACTCCAATAGAGTCTGAGTGAGATGGACTTATTTCTC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATATAATACTCCAATAGAGTCTGAGTGAGATGGACTTATTTCTC  200

seq1  TCCATTTTCACACTTACTTTCATCCTCTTTCTCCTCTCCTGGGGATC-AA  243
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCATTTTCACACTTACTTTCATCCTCTTTCTCCTCTCCTGGGGATCAAA  250

seq1  ATTCAATTCTTTATGCATGGAGGGCACCCAGAATTTAGTAATTTCCAAGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTCTTTATGCATGGAGGGCACCCAGAATTTAGTAATTTCCAAGT  300

seq1  TAAGTGAAATTTCTGAAATACCAATAGCTAAATGTAAATTTAGGTCCTCC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAAATTTCTGAAATACCAATAGCTAAATGTAAATTTAGGTCCTCC  350

seq1  GGGCTTATTAAATTCCATGCAAAGAACTATTTATTGTGTAGCAATATGCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTATTAAATTCCATGCAAAGAACTATTTATTGTGTAGCAATATGCA  400

seq1  GGGCCTCCCTAAAACACTTCACAGTGATCGAACATGCATCTGCAGCAAAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCCCTAAAACACTTCACAGTGATCGAACATGCATCTGCAGCAAAC  450

seq1  ACTGGTCTCTGAAAGAATTCAACCTTGGCCACTTTTGTCTTCACCCACTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCTCTGAAAGAATTCAACCTTGGCCACTTTTGTCTTCACCCACTC  500

seq1  TGTGTCACTAAGTGTCACATATACAGAGCACAAGAAAAAAAATCAAACTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCACTAAGTGTCACATATACAGAGCACAAGAAAAAAAATCAAACTG  550

seq1  AAGGGTTTGGGGCTGGGTAGGAAAATGAGAAGAACACAAGATGTGTTCTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTTGGGGCTGGGTAGGAAAATGAGAAGAACACAAGATGTGTTCTT  600

seq1  TTAGTGCGAAGTGGACTGCTTTTTGTCTATCTCGGAGGGTTTAACAAATA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCGAAGTGGACTGCTTTTTGTCTATCTCGGAGGGTTTAACAAATA  650

seq1  AGATTATTCACAAGCTACGAAGATAAAGAGGGAAATATAAGCAAGGTGGA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTCACAAGCTACGAAGATAAAGAGGGAAATATAAGCAAGGTGGA  700

seq1  AAGGGACCGTCAAATAGAAGAGGTAGCCCTGAAGAGGATGATAGTTATAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACCGTCAAATAGAAGAGGTAGCCCTGAAGAGGATGATAGTTATAA  750

seq1  GGCTGAGTTTTGGGTAAGAAAACTTAAACAGAACAATGGGTTATTTTGGT  793
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGTTTTGGGTAAGAAAACTTAAACAGAACAATGGGTTATTTTGGT  800

seq1  ATGAGAAAGAATTC  807
      ||||||||||||||
seq2  ATGAGAAAGAATTC  814