BAC Information

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BAC

Clone NameB6Ng01-314N24
Chromosome13 (Build37)
Map Location 67,617,879 - 67,618,972
singlet/doubletsinglet
Overlap geneZfp87
Upstream geneC330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817
Downstream geneZfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314N24.bB6Ng01-314N24.g
ACCGA105673GA105674
length1,1521,098
definitionB6Ng01-314N24.b B6Ng01-314N24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacagaagataattattataacaatgaattatgtggcaaggcc
ttcatttatccttcaagactctctaaacataagagaatttgtgcaggaga
gaagccctacaagtgtgaagtatgtggcaaggccttccatgtttcatcac
tgctttctaaacacaggacaattcatacaggagaaaaactctataagtgt
gaagtatgtgggaaggccttttattatccatcaagactttccaaccataa
gaaaattcatacaggagagaaaccattccagtgtgaagtatgtgggaagg
ccttctgttttccttcatcactatctaaacacaagagaattcacacagga
gagaaaccatacaaatgtaaagagtgtggaaaggccttccgctctctgtc
ctcactttctaaacacaagagaattcacacaggagagaaaccctacaagt
gtgaagaatgtggcaaggccttccattatccatcattactttctaaacac
aagataattcatacagaagaaaaaccttacaagtgtgacgtatgtggcca
ggcattccatgttccatcaaaactttctcatcacaagataattcatacag
gagaaaaaccctacaagtgtgaagtgtgtggcaaggccttctgcattcca
ttattactttctaaacacaagagagttcatacaggagagaatccctataa
cagtcaagtatgtagcaaggccttcgtttatccttcaaaactttctaagc
ataagaaagttcgtacaaaagagaaaccatacaagtgtgaagtatgtgga
aaggccttccgctttccatcattactactaatacacaagggaatgcatac
tggagaaaaaccctacaagtgtgaagattgtggcaaggccttccattatc
catcactactttctaaacacaagcgaattcatacaggagaaaagccatac
cagtgtgaagtgtgtggcaagacttcatgttcatcatcactatctaaaca
cagataatcatacaggagagaagcatacagtgtgaaatatggtgggagac
ttcgcttttcatcatcactatctaaacacaaggagaatcattacagaaag
aaaacctacaggtgtatatgtgccaggcttcaacttccatcaataccttg
ca
gaattctttgatgttccttaaggagtgaagggtagctataggatttccca
cactcttcacatttgtagggcttctctccagagtgaccaagtctatgcct
cataaggtaggagtgagtagaaaaggctttcccgcactcctcacagttgt
agagcttcacttcagcatggattctctggtgcttagaaagttcggagcga
gttctaaacatgctgccacatatttcacaattgtaaggtttcactccaga
atgaattcgttgatgttccttaaggattgaaggataacaaaatgttttgc
cacactcttcgcatttgtatggtttctctctagagtggcccaatttgtgc
cgaatgaggtacgaatgagtagaaaaggctttcccgcactcctcacaact
gtacagcttcacttccgcatggatcctctggtgcttagaaaggtctgagc
tagttctaaacatgctcccacatacttcacacttgtagggtttcactcca
gaatgaataatctgatgtcccttcaggtttgaacgatagtagaatgtttt
cccacactcttcacactggtagggtttctctccagtatgaattctttggt
gttggtgaaagtatgttgacctacggaaggctttgccacattcttcacaa
cggtatggtttctctccagaatgaattctttgatgctgctttagggttga
gggataggaaaaggctttcccacattcttcacacctgtaaggattctctg
cagaatgaattctttgatgttgcttaaggaatgaaggtaaataaaaggct
ttgccacactcctcacacttgcagagattctctgcagaatgagttcgttg
atgttgcttaagcaatgaagggaaataaaaggctttggcacactcctcac
acttgtagggttgtctccagagtggatttcttgtgtatataaagtgctga
gcgagtactgaagcccttgccacacttcttcacacttgtaggtttcctct
cccggtgtggattccgctggtgaatagaaagtgcccgagtgagccactaa
agaacctttcccacattcttcacatttgtagggcctctccacagatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67617879_67618972
seq2: B6Ng01-314N24.g_64_1161

seq1  GAATTCTTTGATGTTCCTTAAGGAGTGAAGGGTAGCTATAGGATTTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATGTTCCTTAAGGAGTGAAGGGTAGCTATAGGATTTCCCA  50

seq1  CACTCTTCACATTTGTAGGGCTTCTCTCCAGAGTGACCAAGTCTATGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTCACATTTGTAGGGCTTCTCTCCAGAGTGACCAAGTCTATGCCT  100

seq1  CATAAGGTAGGAGTGAGTAGAAAAGGCTTTCCCGCACTCCTCACAGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGTAGGAGTGAGTAGAAAAGGCTTTCCCGCACTCCTCACAGTTGT  150

seq1  AGAGCTTCACTTCAGCATGGATTCTCTGGTGCTTAGAAAGTTCGGAGCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTCACTTCAGCATGGATTCTCTGGTGCTTAGAAAGTTCGGAGCGA  200

seq1  GTTCTAAACATGCTGCCACATATTTCACAATTGTAAGGTTTCACTCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAACATGCTGCCACATATTTCACAATTGTAAGGTTTCACTCCAGA  250

seq1  ATGAATTCGTTGATGTTCCTTAAGGATTGAAGGATAACAAAATGTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCGTTGATGTTCCTTAAGGATTGAAGGATAACAAAATGTTTTGC  300

seq1  CACACTCTTCGCATTTGTATGGTTTCTCTCTAGAGTGGCCCAATTTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCTTCGCATTTGTATGGTTTCTCTCTAGAGTGGCCCAATTTGTGC  350

seq1  CGAATGAGGTACGAATGAGTAGAAAAGGCTTTCCCGCACTCCTCACAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGAGGTACGAATGAGTAGAAAAGGCTTTCCCGCACTCCTCACAACT  400

seq1  GTACAGCTTCACTTCCGCATGGATCCTCTGGTGCTTAGAAAGGTCTGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCTTCACTTCCGCATGGATCCTCTGGTGCTTAGAAAGGTCTGAGC  450

seq1  TAGTTCTAAACATGCTCCCACATACTTCACACTTGTAGGGTTTCACTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAAACATGCTCCCACATACTTCACACTTGTAGGGTTTCACTCCA  500

seq1  GAATGAATAATCTGATGTCCCTTCAGGTTTGAACGATAGTAGAATGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATAATCTGATGTCCCTTCAGGTTTGAACGATAGTAGAATGTTTT  550

seq1  CCCACACTCTTCACACTGGTAGGGTTTCTCTCCAGTATGAATTCTTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTCTTCACACTGGTAGGGTTTCTCTCCAGTATGAATTCTTTGGT  600

seq1  GTTGGTGAAAGTATGTTGACCTACGGAAGGCTTTGCCACATTCTTCACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGAAAGTATGTTGACCTACGGAAGGCTTTGCCACATTCTTCACAA  650

seq1  CGGTATGGTTTCTCTCCAGAATGAATTCTTTGATGCTGCTTTAGGGTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTATGGTTTCTCTCCAGAATGAATTCTTTGATGCTGCTTTAGGGTTGA  700

seq1  GGGATAGGAAAAGGCTTTCCCACATTCTTCACACCTGTAAGGATTCTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGAAAAGGCTTTCCCACATTCTTCACACCTGTAAGGATTCTCTG  750

seq1  CAGAATGAATTCTTTGATGTTGCTTAAGGAATGAAGGTAAATAAAAGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGAATTCTTTGATGTTGCTTAAGGAATGAAGGTAAATAAAAGGCT  800

seq1  TTGCCACACTCCTCACACTTGCAGAGATTCTCTGCAGAATGAGTTCGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACACTCCTCACACTTGCAGAGATTCTCTGCAGAATGAGTTCGTTG  850

seq1  ATGTTGCTTAAGCAATGAAGGGAAATAAAAGGCTTTGGCACACTCCTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCTTAAGCAATGAAGGGAAATAAAAGGCTTTGGCACACTCCTCAC  900

seq1  ACTTGTAGGGTTTGTCTCCAGAGTGGATTTTCTTGTGTATATAAAGTGCT  950
      |||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  ACTTGTAGGG-TTGTCTCCAGAGTGGA-TTTCTTGTGTATATAAAGTGCT  948

seq1  GAGCGAGTACTGAAGGCCTTGCCACAC-TCTTCACACTTGTAGGGTTTCT  999
      ||||||||||||||| ||||||||||| |||||||||||||||| || ||
seq2  GAGCGAGTACTGAAGCCCTTGCCACACTTCTTCACACTTGTAGGTTTCCT  998

seq1  CT-CCGGTGTGGATT-CGCTGGTGAATAGAAAGTG-CCGAGTGAG-CACT  1045
      || |||||||||||| ||||||||||||||||||| ||||||||| ||||
seq2  CTCCCGGTGTGGATTCCGCTGGTGAATAGAAAGTGCCCGAGTGAGCCACT  1048

seq1  AAAGA--CCTTCCCACATTCTTCACATTTGTAGGGCTTCTCCACAGGATG  1093
      |||||  | ||||||||||||||||||||||||||| |||||||| ||||
seq2  AAAGAACCTTTCCCACATTCTTCACATTTGTAGGGCCTCTCCACA-GATG  1097

seq1  A  1094
      |
seq2  A  1098