BAC Information

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BAC

Clone NameB6Ng01-315M13
Chromosome13 (Build37)
Map Location 88,339,311 - 88,339,835
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675707
Downstream geneLOC667230, EG435375, Edil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315M13.bB6Ng01-315M13.g
ACCGA106341GA106342
length9511,172
definitionB6Ng01-315M13.b B6Ng01-315M13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccacatcccagtgcgctgtcacaccaaggtgaattcagcatcag
gtcaacacctgttcagcctatctgcatcccctcaaatgtacctgctgcaa
taagagtgtccaaaaaactgtgtacctagtgctagcattgatgcagttag
ttacttaccaccatgcatgatattgttatttcccttccattttctgtaga
gcttcacccaaggcattgtttctcaatgggttctcctgttttcaagccct
atattggctgccacctttagtagtctaatggtcatggaaaaactgggtta
acctgaaatgggggcagaaaaggaaaaagaacagggtgcaagagaaggat
gaagccaagacaaaagttctgatcaaggctcaaagtttaatattcagcat
tgcatttatatatatggaaagcccacagactacgttctttgttcacctgg
attatgttgcaaagcaagctcagcaggcagtctactcctgtaggaaattg
caaattcagctgagtgtggaggtcaaaaagccattgtggcagggaatcaa
ggtctgtttatcctactcaagggaagggcacaatcctgccatagcaaggc
ctgaatacactatcacactcgacagaaagattcagatttaaaatcacttc
tcatggtaattgtgatagaggaattcaagaagaacataaataattccctt
aaagaaatagaggagaactcagggaaacaggttgaaattcttaaagagaa
aacaaacaaacaaaaatattgcttaaagaattaaaagaaaacacaagcaa
agaagaggtgaatgaattgaaaaaaccatccaggatctgaaaatggaagt
agaaacaataaagaagtcataaagggagacaaccctggagaaagaaaagc
taggaaaaagaacatgagccatagatgcagatcactaacacatactagag
a

gaattccttttgttgcacaattggcttgtgagaaagctaatgcagcttgc
ttcacagccattcggccataaaaagcacagacagactcatcaggatatac
ttatctttgtgcagaaattggtccttcaatcagggtatggccatggttgc
tgccttacaagggagcactgtgcaagtgatgctttcaaagaaacaaggga
atacaggatgttttaaatgtggaggtttgggtcattttaaaaatgattgt
cccagggactgaggcacaagtggataatcagatagtgccccaggaatttt
tcttcagtgaaagaagggtaatcattgggccaggggatgtagatataaaa
ccgggattcagggctgtctcctgtagggaaatgagcagaggggccagcct
tgggcctccagacatccacagaaagcagcttatggggctggaaagctgct
accaagccctggaaattcatttctgaagttatcagagcaaaatcaggaag
tgctggactggacctcagttcaaccactcaaagtattgaccctagaaatg
ggagttcaaaccctgcctacaggagtttttggatccgtgcatcctgtgac
ctggagattacttacaggctgaagcagcattattataaaaggattgcaga
tttatccattatttatagataatgatcatgagagacaaattaaaatcatg
gctatttccccccatggcattataactgtacctgctgacaaaagaagtgc
tcaacttactttagttcccttgcatccactaccttgcaaagaagttaaga
gtgagagaggacagagtggttttggttcctctgatgtgtactgggttcaa
tctattacaagtatgaaacttaaccttaaattgataattgaaggaaaaag
ttttgaaagattaatagatactgggactgatatacaggacagattggcaa
tcaacttggcctttatttgatactctcaccccactttcaagggactgctt
atgccaataattcaaaataaaagtctaacttctacctggaaagatgagag
gacattccagaacaatttcactctatatcatgcccacatttggcctatta
cgttctaggagagattcctctagttcacagaattggtcttttataacaat
gctaaatattccctcagaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_88339311_88339835
seq2: B6Ng01-315M13.b_47_571 (reverse)

seq1  TGACCTCCACACTCAGCTGAATTTGCAATTTCCTACAGGAGTAGACTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCCACACTCAGCTGAATTTGCAATTTCCTACAGGAGTAGACTGCC  50

seq1  TGCTGAGCTTGCTTTGCAACATAATCCAGGTGAACAAAGAACGTAGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCTTGCTTTGCAACATAATCCAGGTGAACAAAGAACGTAGTCTG  100

seq1  TGGGCTTTCCATATATATAAATGCAATGCTGAATATTAAACTTTGAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTTCCATATATATAAATGCAATGCTGAATATTAAACTTTGAGCCT  150

seq1  TGATCAGAACTTTTGTCTTGGCTTCATCCTTCTCTTGCACCCTGTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGAACTTTTGTCTTGGCTTCATCCTTCTCTTGCACCCTGTTCTTT  200

seq1  TTCCTTTTCTGCCCCCATTTCAGGTTAACCCAGTTTTTCCATGACCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCTGCCCCCATTTCAGGTTAACCCAGTTTTTCCATGACCATTA  250

seq1  GACTACTAAAGGTGGCAGCCAATATAGGGCTTGAAAACAGGAGAACCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACTAAAGGTGGCAGCCAATATAGGGCTTGAAAACAGGAGAACCCAT  300

seq1  TGAGAAACAATGCCTTGGGTGAAGCTCTACAGAAAATGGAAGGGAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAACAATGCCTTGGGTGAAGCTCTACAGAAAATGGAAGGGAAATAA  350

seq1  CAATATCATGCATGGTGGTAAGTAACTAACTGCATCAATGCTAGCACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCATGCATGGTGGTAAGTAACTAACTGCATCAATGCTAGCACTAG  400

seq1  GTACACAGTTTTTTGGACACTCTTATTGCAGCAGGTACATTTGAGGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAGTTTTTTGGACACTCTTATTGCAGCAGGTACATTTGAGGGGAT  450

seq1  GCAGATAGGCTGAACAGGTGTTGACCTGATGCTGAATTCACCTTGGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAGGCTGAACAGGTGTTGACCTGATGCTGAATTCACCTTGGTGTG  500

seq1  ACAGCGCACTGGGATGTGGGAATTC  525
      |||||||||||||||||||||||||
seq2  ACAGCGCACTGGGATGTGGGAATTC  525


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