BAC Information

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BAC

Clone NameB6Ng01-317G11
Chromosome13 (Build37)
Map Location 17,228,838 - 17,229,048
singlet/doubletsinglet
Overlap gene5033411D12Rik
Upstream geneLOC665191
Downstream gene2810021B07Rik, Cdc2l5, Rala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317G11.bB6Ng01-317G11.g
ACCGA107557GA107558
length882209
definitionB6Ng01-317G11.b B6Ng01-317G11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtggaatttttagggtcacttatatatactatcatatcat
ctgcaaaacgtgatattttgacttcatcttttccaattcgtatccccttg
atctccttttgttgtcgaattgctctggctaggacttcaagtactatgtt
gaagaggtagggagaaagtgggcagccttttgtagtccctgattttagtg
ggattgcttccagattctcaccatttactttgatgttggctactggtttg
ctgtagattgcttttattatatttaggtatgggccttgatttcctgatct
ttccaagacttttatcatgaatgggtgttggatcttgtcaaatgctttct
ctgcatctaacgagatgatcatgtgattttgtctttgaatttgtttatat
aatggattacgttgatggatttccatatattaaactattcctgcattcct
taataaaacctacttggtcaggatggatgattgctttaatatgttcttgg
attcggttagcaagaattttattcaatatttttgcatcgatattcataag
ggaaattggtctgaagttctctatcttttgtggatctttctgtggtttag
gtatcagagtaattgtggcttcatagaatgaattgggtagagtaccttct
acttctattttgtgcagaactggaattagatcttctttgaaggtctgata
gaactctgcactaaacccatctggtcctgggctttttttttttttttttt
ttttttttttttcgcctgggagactattatatgactgctttctatttctt
tttaggggatatgggactgtttagatcgtcacttgaacccgattcaattt
gggtacctggtatccggctaaaaaattgtcca
caagcaggttattcccttagctgttatgggccctactgacagaaatgtgt
ttaaatgttgagagagagagggagagagagagagaagaagagagagagag
agagaaagagagagagatgatatatatagagatttttattttttatttgt
gagctagagatatttgcactttatgttttgttccaactatctaaacatga
atcacaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17228838_17229048
seq2: B6Ng01-317G11.g_72_280

seq1  CAAGCAGGTTATTCCCTTAGCTGTTATGGGCCCTACTGACAGAAATGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGTTATTCCCTTAGCTGTTATGGGCCCTACTGACAGAAATGTGT  50

seq1  TTAAATGTTGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  TTAAATGTTGAGAGAGAGAGGGAGAGAGAGAGAGA-AGA-AGAGAGAGAG  98

seq1  AGAGAGAAAGAGAGAGAGAAAGAGAGAGAGAGAGAGAAAGA-GAGAGAGA  149
      |||||||||||||||||| | || | | | |||||     |      |  
seq2  AGAGAGAAAGAGAGAGAG-ATGATATATATAGAGATTTTTATTTTTTATT  147

seq1  TGTGAGCAAGAGATATTTGCACTTTATGTACTGTTCCAACAATCTAGACA  199
      ||||||| |||||||||||||||||||||  ||||||||| ||||| |||
seq2  TGTGAGCTAGAGATATTTGCACTTTATGTTTTGTTCCAACTATCTAAACA  197

seq1  TGAAAAACAACA  211
      ||||  ||||||
seq2  TGAATCACAACA  209