BAC Information

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BAC

Clone NameB6Ng01-319J06
Chromosome2 (Build37)13 (Build37)
Map Location 139,375,295 - 139,375,35210,995,142 - 10,995,311
singlet/doubletsingletsinglet
Overlap geneC130053K05Rik
Upstream geneLOC628103
Downstream geneLOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319J06.bB6Ng01-319J06.g
ACCGA109171GA109172
length629170
definitionB6Ng01-319J06.b B6Ng01-319J06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(139,375,295 - 139,375,352)(10,995,142 - 10,995,311)
sequence
gaattctcaactgaggaaacttgagtggctgagaaggatctaaagacatg
tacaacatccttagtcaccagagcaatacaaatcaaaacaatcctgagat
tctacctcacaccagtcagaatggctgagatcaaaaaattcaggtgacat
gcgatgttgtcgaaaattcagagaaaaggaacactcctccattgctggtg
ggaatgcaagctgatacaactactctggaagtcaggctggtggttcctca
ggaaattggacatatttgcatcaatggaaggagagggccttggtcctatg
aaggctcgatagatacaacagtgtaggggaatcaaaggtggagtggtgag
agtgggtgaatgggtagaagaacaccctcatagaagcagcagaaaagaga
atgggatagagaatttcttagaggggagaaactgcaaaagatgataacat
ttgaaatgtaaataaagaaaatttccaataaaaaaagaaaaataatttaa
ctgaataaattagtcaaagaaataatagaatattggacatagtactacct
aaagacccagctatatcattcctgggcatatacccgaagatgctccaaca
tgtattaaggactcgtggtccactatgtt
atctgtgatcttcttcttcttttgtatgtgctgaaattcttttcaactag
gcaacacataagtgatagactttcatactagaaagaagatccaagaatag
ttaagctgtgaaaattgaccctgatgtatgtggggaaatgcatatttgga
tgggaaggggagaagtggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139375295_139375352
seq2: B6Ng01-319J06.b_639_681 (reverse)

seq1  AACATAGTGGAGCATGTGTCCTTACTGTATGTGTCCTTATAACATGTTGG  50
      ||||||||||| || | ||||||| |               |||||||||
seq2  AACATAGTGGACCACGAGTCCTTAAT---------------ACATGTTGG  35

seq1  AGCATCTT  58
      ||||||||
seq2  AGCATCTT  43

seq1: chr13_10995142_10995311
seq2: B6Ng01-319J06.g_74_243 (reverse)

seq1  CTCCACTTCTCCCCTTCCCATCCAAATATGCATTTCCCCACATACATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTCTCCCCTTCCCATCCAAATATGCATTTCCCCACATACATCAG  50

seq1  GGTCAATTTTCACAGCTTAACTATTCTTGGATCTTCTTTCTAGTATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATTTTCACAGCTTAACTATTCTTGGATCTTCTTTCTAGTATGAAA  100

seq1  GTCTATCACTTATGTGTTGCCTAGTTGAAAAGAATTTCAGCACATACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCACTTATGTGTTGCCTAGTTGAAAAGAATTTCAGCACATACAAA  150

seq1  AGAAGAAGAAGATCACAGAT  170
      ||||||||||||||||||||
seq2  AGAAGAAGAAGATCACAGAT  170