BAC Information

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BAC

Clone NameB6Ng01-319K15
Chromosome13 (Build37)
Map Location 80,355,075 - 80,356,223
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319K15.bB6Ng01-319K15.g
ACCGA109237GA109238
length1,143972
definitionB6Ng01-319K15.b B6Ng01-319K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttactttgttatcaaggttatacaacggctaacattacttcatg
tacactgtgaaacagcacagaactaagttaagaggaaaataaatatgcta
aaggtagaagaaaatagcatcaactaaaaatgcaaatagtattatgaact
tcagaaattgaatgatgagtaaggaatgggatggcacaaataatgtctct
ttgatatatttactgaagaattttaagcagtatgattaatgttataaatg
tgtatagattggtaatagggagaaactggactgtggggtattaaggctgg
agacaaatgattcattagaaagatatagagactataggtgcaagaactta
atttgtgttataagacagtagtataacacatgttgaggatggatgcaagg
gttgaaatattaagacatttaaaattcaagtacttaatattcttgtagca
gagttaaatgggaattccatattgaagagatagatgaagagtctaccttt
tttttcctttggaaaggttgttaatgctatgtaaaacagaaagagaaaag
agacaacttaagatgagacgaatcaagaagagggaataggagagggaagc
aaaaggaaagggtgaagaaaagaatgaacaaagaaacaaagggaaggaag
ataaaggaaatggaaaaaagatataagaaagaggtgtgtatttagggtca
taaattatcatcacagactattaacaatgtattagaaaacagtcagagat
gccctccatgcatgactaaaattgttgacaatacctagaaatatgttgtt
tatacaatccttttcctgaaatgaacacataattgaggttaacacttata
gcaggcatagtaacaatcataaactagagcagagaaagcaatataatctt
ataagttatttaaactgtatttctggaatttgccatctaatacttttgtg
agtgaaactttaatttttgacctttgcataaggtgctcacagttctgtgt
ttggatatgttggtttacagtcatctttgggctatccaaattgatagcag
tttaaatataatatgcaggaaataacctctcaattgaacataggaatata
cgaccggatgctggagactcatagttaagctgagtctggagag

gaattctgacaaaactagatcactggagggacaggatacagtcagagaca
gtaatgacaggtagcactagagataaccagatggcgagaggcaagaacaa
gaacataagcaacagaaaagaaggttacttggcagccacaaagtgagttc
taggacagccagggctatacagagaaacgttgtctcagaaaaaaaaaggg
ggggggagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggt
ggttactcggcatcatcaaaagccagttctaccaccatagcatgtccgga
ataccccatcacaccacaataacaatattagaatttaaaatcacttataa
taatgacgatgatgatggtagaagacttgtaaataactcccttaatgaaa
aatatgagaacacagataagcaggtagaagccttatggaaatataaaaat
cccttaaagaaatataggaaaacacaaccaaataggtgaaggaattaaac
aaaacaatccaggatttaaaaatggaaatagaaataataaagaaatcaaa
aaagggatacaatcctgtagatgaaaaacataggaaagagatcaggagtc
atagattaagcatcaccaacagaatacaagagatagaagagaaaatctca
ggtgcagaagatactacagaaaacactgacaaaacagtcaaagaaaatac
aaaatgcaaaaatctcctaaacagaaacatcgagtaaatacaggatacaa
tgagaagacgaaatctaatgataccaggtttaacagtttaacagaactgg
gaaattctggaagaaatggccaattttctagacagataccaggggccaaa
gttaaatcagaatcagataaaccatctaaacatacccatacccctaaaga
aatagcagcagtcataaaacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80355075_80356223
seq2: B6Ng01-319K15.b_49_1191 (reverse)

seq1  CTCTCAAGACATCAGCTATACCTATGAGTTCTTCAAGCAT-CGGTCCTAT  49
      ||||| |||| |||||| || ||||||||   || ||||| ||||| |||
seq2  CTCTCCAGAC-TCAGCT-TAACTATGAGT--CTCCAGCATCCGGTCGTAT  46

seq1  ATCCCTATGTTTCATTGAGA-GTTATTTCCTGGCATA-TATATTTAAACT  97
      || ||||||||  ||||||| |||||||||| ||||| ||||||||||||
seq2  ATTCCTATGTTCAATTGAGAGGTTATTTCCT-GCATATTATATTTAAACT  95

seq1  GCTTATCAATTTGAATAG-CCAAAGATGACTGTAAAACCAACATATCCAA  146
      || |||||||||| |||| |||||||||||||| ||||||||||||||||
seq2  GC-TATCAATTTGGATAGCCCAAAGATGACTGT-AAACCAACATATCCAA  143

seq1  ACACAGAACTGTGAACCACCTTATGCAAAGGTCAAAAATTTAAAGTTTCA  196
      ||||||||||||| | |||||||||||||||||||||| |||||||||||
seq2  ACACAGAACTGTG-AGCACCTTATGCAAAGGTCAAAAA-TTAAAGTTTCA  191

seq1  CTCACAAAAGTATTAGATGGCAAATTCCAGAAATACAGTTTTAAATAACT  246
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCACAAAAGTATTAGATGGCAAATTCCAGAAATACAG-TTTAAATAACT  240

seq1  TATAAGATTATATTGCTTTCTCTGCTCTAGTTTATGATTGTTACTATGCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGATTATATTGCTTTCTCTGCTCTAGTTTATGATTGTTACTATGCC  290

seq1  TGCTATAAGTGTTAACCTCAATTATGTGTTCATTTCAGGAAAAGGATTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAAGTGTTAACCTCAATTATGTGTTCATTTCAGGAAAAGGATTGT  340

seq1  ATAAACAACATATTTCTAGGTATTGTCAACAATTTTAGTCATGCATGGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAACATATTTCTAGGTATTGTCAACAATTTTAGTCATGCATGGAG  390

seq1  GGCATCTCTGACTGTTTTCTAATACATTGTTAATAGTCTGTGATGATAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTCTGACTGTTTTCTAATACATTGTTAATAGTCTGTGATGATAAT  440

seq1  TTATGACCCTAAATACACACCTCTTTCTTATATCTTTTTTCCATTTCCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACCCTAAATACACACCTCTTTCTTATATCTTTTTTCCATTTCCTT  490

seq1  TATCTTCCTTCCCTTTGTTTCTTTGTTCATTCTTTTCTTCACCCTTTCCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCTTCCCTTTGTTTCTTTGTTCATTCTTTTCTTCACCCTTTCCT  540

seq1  TTTGCTTCCCTCTCCTATTCCCTCTTCTTGATTCGTCTCATCTTAAGTTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCCCTCTCCTATTCCCTCTTCTTGATTCGTCTCATCTTAAGTTG  590

seq1  TCTCTTTTCTCTTTCTGTTTTACATAGCATTAACAACCTTTCCAAAGGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTCTCTTTCTGTTTTACATAGCATTAACAACCTTTCCAAAGGAA  640

seq1  AAAAAAGGTAGACTCTTCATCTATCTCTTCAATATGGAATTCCCATTTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGTAGACTCTTCATCTATCTCTTCAATATGGAATTCCCATTTAA  690

seq1  CTCTGCTACAAGAATATTAAGTACTTGAATTTTAAATGTCTTAATATTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTACAAGAATATTAAGTACTTGAATTTTAAATGTCTTAATATTTC  740

seq1  AACCCTTGCATCCATCCTCAACATGTGTTATACTACTGTCTTATAACACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTGCATCCATCCTCAACATGTGTTATACTACTGTCTTATAACACA  790

seq1  AATTAAGTTCTTGCACCTATAGTCTCTATATCTTTCTAATGAATCATTTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTTCTTGCACCTATAGTCTCTATATCTTTCTAATGAATCATTTG  840

seq1  TCTCCAGCCTTAATACCCCACAGTCCAGTTTCTCCCTATTACCAATCTAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCCTTAATACCCCACAGTCCAGTTTCTCCCTATTACCAATCTAT  890

seq1  ACACATTTATAACATTAATCATACTGCTTAAAATTCTTCAGTAAATATAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTATAACATTAATCATACTGCTTAAAATTCTTCAGTAAATATAT  940

seq1  CAAAGAGACATTATTTGTGCCATCCCATTCCTTACTCATCATTCAATTTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGACATTATTTGTGCCATCCCATTCCTTACTCATCATTCAATTTC  990

seq1  TGAAGTTCATAATACTATTTGCATTTTTAGTTGATGCTATTTTCTTCTAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTCATAATACTATTTGCATTTTTAGTTGATGCTATTTTCTTCTAC  1040

seq1  CTTTAGCATATTTATTTTCCTCTTAACTTAGTTCTGTGCTGTTTCACAGT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCATATTTATTTTCCTCTTAACTTAGTTCTGTGCTGTTTCACAGT  1090

seq1  GTACATGAAGTAATGTTAGCCGTTGTATAACCTTGATAACAAAGTAAGAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGAAGTAATGTTAGCCGTTGTATAACCTTGATAACAAAGTAAGAA  1140

seq1  TTC  1149
      |||
seq2  TTC  1143


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