BAC Information

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BAC

Clone NameB6Ng01-320J24
Chromosome13 (Build37)
Map Location 100,583,609 - 100,584,721
singlet/doubletsinglet
Overlap genenone
Upstream geneFcho2, Tnpo1, EG432798, LOC100039771, 1700024P04Rik, LOC100039967, LOC100039797, Zfp366, Ptcd2, Mrps27, Mtap1b
Downstream geneCartpt, Mccc2, Bdp1, Serf1, Smn1, Naip2, Birc1-rs1, Naip5, Birc1c-ps1, Birc1f, EG667838, Naip1, Gtf2h2, Ocln, LOC667861, Marveld2, Rad17, Taf9, Ccdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320J24.bB6Ng01-320J24.g
ACCGA109947GA109948
length1,1751,100
definitionB6Ng01-320J24.b B6Ng01-320J24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcagcaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagatgacagc
agatgctggagaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattagacatagtactacctgaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtattacatttacacaatg
gagtactactcagttattaaaaagaatgaatgtatggaattcctaggtaa
atggatggacctggagggcatcgtcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtacttactgataagtggatattagcccagattc
ttagaatacccaagatataagatacaatttgtgaaattcatgaaactcaa
gaagaacgaagaccaaagtgtggacactctgccccttcttagaattggga
acaatacacccatggaaggagttacagagacaaagtttggagctgagatg
gaccatctagagactgccatatccagggatccatcccataatcagcttcc
aaacgctgacaccattacatacactagcaagattttgctgaaaggaccct
gatatagctgtctcttgtgagactatgccggggcctagcaaacacagaag
tggatgctcacagttagctattggatggatccccagtgaaggagatagag
aaagtacccaaggagctaaagagatctgcaaccccataggtggacacaat
atgaactaaccagtaccccccccccccccccgagctcgtgtttctagctg
ccattgtatcagaagatgcctagtcgcccatcagaggaagagaggcccat
tagtcatgccaacctttatatgcctcagactacgggactgccaggccaaa
aatgagaggggggttaagggggggt
gaattcttacagattgtcctatacagcttagactctggttgtttttgaac
cggggtggatggatgccaatgaaaaggagtccttatgtagacaggcattt
tagtacagaaacaaggccaccttttcccaagaggccgccacagtaggaag
aggttcagaacgttcagggagtagaagcctttgtttgcaaccgaggccca
aggtgaatgcttcacaagaggtcaggcagggccactggctccctcagctg
gaagcagttgctttttaggtgattttatttgtccttgagaaaggggactc
tgagatggcccttcctgctcactaaaggaacagatccatccatcactatt
gagcgagggcttgtcactgtggaagagatgtgggcgaccagctacctcaa
tctccagcctctcagcctccagccaattagctctggacgtggaggggtga
gagaagcagaagggcaggaaatgggctaaaattagcatgggagggagatg
gaaccgaagcttctttcctggtggtgtttggattcacagctcctatcaga
taacgctcctactgattataaccatttgagggcattggaagtaattatcc
ttgactgctaggttgggaaacgagaagccacccttctgagggttaccagc
tcagcctgacctttgggtggtctgcctactaaattaggctcctgccacat
gtggagcccagtggctgttgtatcaaccatcactcagcacgtctcttctc
atgacatacgggactgacaatgatctctaaagggaaccataagaactggt
tctcagcttgctgggaaaattaaatcatttaagaatatgttagggaggcc
atctttccttccaactgcccaacgaagagtggctaggactgtaaactcaa
gtcccccgggtgtgccttaatcttagcctctccccgatgagattcttctg
tgatcctcagtttccttacattaaaatgggtgcactatacaatctatgag
gggctgaaatgtagaatagtgtatgttttctcgggctttctttgtatcac
aatacatgtgacatggtagtgttagccaatcacaggtatcaatgtctctt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_100583609_100584721
seq2: B6Ng01-320J24.g_65_1164 (reverse)

seq1  AAGAGACATTTGATACTTGTGAATTGGCTAACACTACCAATGTTCACATG  50
      |||||||| ||||||| |||| |||||||||||||||| ||| |||||||
seq2  AAGAGACA-TTGATACCTGTG-ATTGGCTAACACTACC-ATG-TCACATG  46

seq1  TATTGTTGATTACAAGAAAGGCCCGAGAAAACATACACTTATTCTACAAT  100
      ||||| ||| |||||  || |||||||||||||||||| |||||||| ||
seq2  TATTG-TGA-TACAAAGAAAGCCCGAGAAAACATACAC-TATTCTAC-AT  92

seq1  TTCAGCCCCTCAATAGGATTGGTATAGTTGCACCCATTTTAAATGTAAGG  150
      ||||||||||| ||| |||| |||||| |||||||||||| |||||||||
seq2  TTCAGCCCCTC-ATA-GATT-GTATAG-TGCACCCATTTT-AATGTAAGG  137

seq1  AAACTGAGGATCACAGAAGAATCTCATCGGGGAGAGGCTAAGATTTAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAACTGAGGATCACAGAAGAATCTCATCGGGGAGAGGCTAAGA-TTAAGG  186

seq1  CACACCCGGGGGACTTGAGTTTACAGTCCTAGCCACTCTTCGTTGGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCGGGGGACTTGAGTTTACAGTCCTAGCCACTCTTCGTTGGGCAG  236

seq1  TTGGAAGGAAAGATGGCCTCCCTAACATATTCTTAAATGATTTAATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGAAAGATGGCCTCCCTAACATATTCTTAAATGATTTAATTTTC  286

seq1  CCAGCAAGCTGAGAACCAGTTCTTATGGTTCCC-TTAGAGATCATTGTCA  349
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCAGCAAGCTGAGAACCAGTTCTTATGGTTCCCTTTAGAGATCATTGTCA  336

seq1  GTCCCGTATGTCATGAGAAGAGACGTGCTGAGTGATGGTTGATACAACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCGTATGTCATGAGAAGAGACGTGCTGAGTGATGGTTGATACAACAG  386

seq1  CCACTGGGCTCCACATGTGGCAGGAGCCTAATTTAGTAGGCAGACCACCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGGCTCCACATGTGGCAGGAGCCTAATTTAGTAGGCAGACCACCC  436

seq1  AAAGGTCAGGCTGAGCTGGTAACCCTCAGAAGGGTGGCTTCTCGTTTCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCAGGCTGAGCTGGTAACCCTCAGAAGGGTGGCTTCTCGTTTCCC  486

seq1  AACCTAGCAGTCAAGGATAATTACTTCCAATGCCCTCAAATGGTTATAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGCAGTCAAGGATAATTACTTCCAATGCCCTCAAATGGTTATAAT  536

seq1  CAGTAGGAGCGTTATCTGATAGGAGCTGTGAATCCAAACACCACCAGGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGAGCGTTATCTGATAGGAGCTGTGAATCCAAACACCACCAGGAA  586

seq1  AGAAGCTTCGGTTCCATCTCCCTCCCATGCTAATTTTAGCCCATTTCCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTCGGTTCCATCTCCCTCCCATGCTAATTTTAGCCCATTTCCTG  636

seq1  CCCTTCTGCTTCTCTCACCCCTCCACGTCCAGAGCTAATTGGCTGGAGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTGCTTCTCTCACCCCTCCACGTCCAGAGCTAATTGGCTGGAGGC  686

seq1  TGAGAGGCTGGAGATTGAGGTAGCTGGTCGCCCACATCTCTTCCACAGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGCTGGAGATTGAGGTAGCTGGTCGCCCACATCTCTTCCACAGTG  736

seq1  ACAAGCCCTCGCTCAATAGTGATGGATGGATCTGTTCCTTTAGTGAGCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCCTCGCTCAATAGTGATGGATGGATCTGTTCCTTTAGTGAGCAG  786

seq1  GAAGGGCCATCTCAGAGTCCCCTTTCTCAAGGACAAATAAAATCACCTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCCATCTCAGAGTCCCCTTTCTCAAGGACAAATAAAATCACCTAA  836

seq1  AAAGCAACTGCTTCCAGCTGAGGGAGCCAGTGGCCCTGCCTGACCTCTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACTGCTTCCAGCTGAGGGAGCCAGTGGCCCTGCCTGACCTCTTG  886

seq1  TGAAGCATTCACCTTGGGCCTCGGTTGCAAACAAAGGCTTCTACTCCCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCATTCACCTTGGGCCTCGGTTGCAAACAAAGGCTTCTACTCCCTG  936

seq1  AACGTTCTGAACCTCTTCCTACTGTGGCGGCCTCTTGGGAAAAGGTGGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTCTGAACCTCTTCCTACTGTGGCGGCCTCTTGGGAAAAGGTGGCC  986

seq1  TTGTTTCTGTACTAAAATGCCTGTCTACATAAGGACTCCTTTTCATTGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTGTACTAAAATGCCTGTCTACATAAGGACTCCTTTTCATTGGC  1036

seq1  ATCCATCCACCCCGGTTCAAAAACAACCAGAGTCTAAGCTGTATAGGACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCACCCCGGTTCAAAAACAACCAGAGTCTAAGCTGTATAGGACA  1086

seq1  ATCTGTAAGAATTC  1113
      ||||||||||||||
seq2  ATCTGTAAGAATTC  1100