BAC Information

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BAC

Clone NameB6Ng01-321L21
Chromosome13 (Build37)
Map Location 97,122,455 - 97,256,062
singlet/doubletdoublet
Overlap geneLOC667582, 1200014M14Rik, 9330128J19Rik, Polk
Upstream geneAggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2, Sv2c
Downstream geneCol4a3bp, Hmgcr, LOC100039456, LOC625662, 1700029F12Rik, EG620648, 5730427N09Rik, LOC100039663, Gfm2, Hexb, Enc1, LOC667676, LOC100039691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321L21.bB6Ng01-321L21.g
ACCGA110769GA110770
length1,0161,032
definitionB6Ng01-321L21.b B6Ng01-321L21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,255,531 - 97,256,062)(97,122,455 - 97,123,459)
sequence
gaattctatgaaaaagagccaaagagcaagcaactctagaaactttcttt
gtaattgcaaaacttagaagcaagcaagataaaacttgagtggattgata
aactgtgtgtccagacaacagaataatgttcagtgtgtaaatgagctaca
aagggacatgaaggaaacttaagtaaatattttaagtataagaagccagc
attgtatggttggcatcttgaacaccttagagaccgtaaagacgaaattg
ccaaggggaaggatgaaggcagaagacgtggggctagtgaaacaactgtg
tattgtagaagtgacccgtgttcccctgatgtaactgtcacctcggaggc
tcactgcctcagtctgctcaccgaggtaggcctagtcccagaagcttcta
gcctccatgcaatctattgtaggcctagaacattttcagcctctgacact
gctgaataagctcaccctttctagttctttctgaactctggctagcggat
tcaactcagctgttctgactcaaaattcctctctaaactgactgatccaa
tctggcttctgtctcagcctctgactttttgctctgcttgacctcaaact
aactctggcaatctgttctaatctggctccttctcattttctggtttgtt
ctgttttccctatgtctagcttgttctctctctctctgcaacctgtcttg
gtaaaactgcctcctcctctctctgccctgccctctcttatgttgcctct
ttgctctctgttctcatgagagttgggaattctgtcaaatctttctctga
ttcatcactttgtctaccactcaattagacatcactttcaaacatgggtg
cttccttctacaaactaactttaccttcattgtttgggattaatgatgtg
tactaagatatgtctgtattccagccagaggggttaaaggtgtatgctaa
caggtgtctctattctagccagagtagccatgttgctagattagattcct
ctttagtatatgattc
gaattctattgaaaaccaggacatctctgactaggagtagctagcaagct
tgcctgttaacccagccatggctaacagctcatgcttgcctacccttcct
actagttttgcaccctcatttctgttcgcactgcctcctgggtcctcgtt
cctatgcgacacatctcacacactatttgactacacggtgagttgtggaa
ctggtaggagggaccagctggaggccaggcagtctatgagtggcaacgga
ggacagctccttccatctttgctgcttgtcctattagcctctctccctga
ctcacaggagggtgtttcagctgcagctggggagagggagaaattgagaa
gcaaagtgattccatgtcagaggcccactccattccagtgcctcggcggc
ccacagtgtgaaccctgtagaaaagaagacaggagatcttaacctagcat
ttagctcttgctatctgccagaatagaggctcaaaatgcaaacttgataa
ccctaggaactgagaaataggattacacaaaatattcaaatatattcagc
acaccaaaggaaatatcagccacgcgaaaaggcaggctacagaatgggag
aaacatctttgcaagctatacttgaaacaagaagttaatatatagaatat
aaattactgcaaagttaaacacaccagaatgcccaaaatatcatcacatc
aataaatggaaaaaaattaaagaagtcttaaaagagaaaaaaaatatgag
caataaatatttaaatgcattaaacatctttaaactgtacagaaatgcaa
attaagaatcatttgaggggggttggagagatggctccatggttaaggac
actggctactctttccagagggcctgagttcaattcctagcaaccacatg
atggctcgaaagcatctatgtgatcagattccctcgtctggcacgcagag
tgtactcagattactcagacataaagttaagtaattcttttttattttta
aaagattaatttggaaatctgtctccccattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_97255531_97256062
seq2: B6Ng01-321L21.b_45_576 (reverse)

seq1  AGAGGAATTTTGAGTCAGAACAGCTGAGTTGAATCCGCTAGCCAGAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATTTTGAGTCAGAACAGCTGAGTTGAATCCGCTAGCCAGAGTTC  50

seq1  AGAAAGAACTAGAAAGGGTGAGCTTATTCAGCAGTGTCAGAGGCTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAACTAGAAAGGGTGAGCTTATTCAGCAGTGTCAGAGGCTGAAAA  100

seq1  TGTTCTAGGCCTACAATAGATTGCATGGAGGCTAGAAGCTTCTGGGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAGGCCTACAATAGATTGCATGGAGGCTAGAAGCTTCTGGGACTA  150

seq1  GGCCTACCTCGGTGAGCAGACTGAGGCAGTGAGCCTCCGAGGTGACAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTACCTCGGTGAGCAGACTGAGGCAGTGAGCCTCCGAGGTGACAGTT  200

seq1  ACATCAGGGGAACACGGGTCACTTCTACAATACACAGTTGTTTCACTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGGGGAACACGGGTCACTTCTACAATACACAGTTGTTTCACTAGC  250

seq1  CCCACGTCTTCTGCCTTCATCCTTCCCCTTGGCAATTTCGTCTTTACGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGTCTTCTGCCTTCATCCTTCCCCTTGGCAATTTCGTCTTTACGGT  300

seq1  CTCTAAGGTGTTCAAGATGCCAACCATACAATGCTGGCTTCTTATACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGGTGTTCAAGATGCCAACCATACAATGCTGGCTTCTTATACTTA  350

seq1  AAATATTTACTTAAGTTTCCTTCATGTCCCTTTGTAGCTCATTTACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTACTTAAGTTTCCTTCATGTCCCTTTGTAGCTCATTTACACAC  400

seq1  TGAACATTATTCTGTTGTCTGGACACACAGTTTATCAATCCACTCAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTATTCTGTTGTCTGGACACACAGTTTATCAATCCACTCAAGTT  450

seq1  TTATCTTGCTTGCTTCTAAGTTTTGCAATTACAAAGAAAGTTTCTAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTGCTTGCTTCTAAGTTTTGCAATTACAAAGAAAGTTTCTAGAGT  500

seq1  TGCTTGCTCTTTGGCTCTTTTTCATAGAATTC  532
      ||||||||||||||||||||||||||||||||
seq2  TGCTTGCTCTTTGGCTCTTTTTCATAGAATTC  532

seq1: chr13_97122455_97123459
seq2: B6Ng01-321L21.g_68_1074

seq1  GAATTCTATTGAAAACCAGGACATCTCTGACTAGGAGTAGCTAGCAAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTGAAAACCAGGACATCTCTGACTAGGAGTAGCTAGCAAGCT  50

seq1  TGCCTGTTAACCCAGCCATGGCTAACAGCTCATGCTTGCCTACCCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTAACCCAGCCATGGCTAACAGCTCATGCTTGCCTACCCTTCCT  100

seq1  ACTAGTTTTGCACCCTCATTTCTGTTCGCACTGCCTCCTGGGTCCTCGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTTGCACCCTCATTTCTGTTCGCACTGCCTCCTGGGTCCTCGTT  150

seq1  CCTATGCGACACATCTCACACACTATTTGACTACACGGTGAGTTGTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCGACACATCTCACACACTATTTGACTACACGGTGAGTTGTGGAA  200

seq1  CTGGTAGGAGGGACCAGCTGGAGGCCAGGCAGTCTATGAGTGGCAACGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGGAGGGACCAGCTGGAGGCCAGGCAGTCTATGAGTGGCAACGGA  250

seq1  GGACAGCTCCTTCCATCTTTGCTGCTTGTCCTATTAGCCTCTCTCCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTCCTTCCATCTTTGCTGCTTGTCCTATTAGCCTCTCTCCCTGA  300

seq1  CTCACAGGAGGGTGTTTCAGCTGCAGCTGGGGAGAGGGAGAAATTGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGAGGGTGTTTCAGCTGCAGCTGGGGAGAGGGAGAAATTGAGAA  350

seq1  GCAAAGTGATTCCATGTCAGAGGCCCACTCCATTCCAGTGCCTCGGCGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTGATTCCATGTCAGAGGCCCACTCCATTCCAGTGCCTCGGCGGC  400

seq1  CCACAGTGTGAACCCTGTAGAAAAGAAGACAGGAGATCTTAACCTAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGTGAACCCTGTAGAAAAGAAGACAGGAGATCTTAACCTAGCAT  450

seq1  TTAGCTCTTGCTATCTGCCAGAATAGAGGCTCAAAATGCAAACTTGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTTGCTATCTGCCAGAATAGAGGCTCAAAATGCAAACTTGATAA  500

seq1  CCCTAGGAACTGAGAAATAGGATTACACAAAATATTCAAATATATTCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGAACTGAGAAATAGGATTACACAAAATATTCAAATATATTCAGC  550

seq1  ACACCAAAGGAAATATCAGCCACGCGAAAAGGCAGGCTACAGAATGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAAGGAAATATCAGCCACGCGAAAAGGCAGGCTACAGAATGGGAG  600

seq1  AAACATCTTTGCAAGCTATACTTGAAACAAGAAGTTAATATATAGAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTTTGCAAGCTATACTTGAAACAAGAAGTTAATATATAGAATAT  650

seq1  AAATTACTGCAAAGTTAAACACACCAGAATGCCCAAAATATCATCACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTGCAAAGTTAAACACACCAGAATGCCCAAAATATCATCACATC  700

seq1  AATAAATGGAAAAAAATTAAAGAAGTCTTAAAAGAGAAAAAAAATATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGGAAAAAAATTAAAGAAGTCTTAAAAGAGAAAAAAAATATGAG  750

seq1  CAATAAATATTTAAATGCATTAAACATCTTTAAACTGTACAGAAATGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATATTTAAATGCATTAAACATCTTTAAACTGTACAGAAATGCAA  800

seq1  ATTAAGAATCATTTGAGGGGGGTTGGAGAGATGGCTCCATGGTTAAGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAATCATTTGAGGGGGGTTGGAGAGATGGCTCCATGGTTAAGGAC  850

seq1  ACTGGCTACTC-TTCCAGAGGGCCTGAGTTCAATTCCTAGCAACCACATG  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTACTCTTTCCAGAGGGCCTGAGTTCAATTCCTAGCAACCACATG  900

seq1  ATGGCTCGAAAGCATCTATGTGATCAGATTCCCTCGTCTGGCACGCAGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGGCTCGAAAGCATCTATGTGATCAGATTCCCTCGTCTGGCACGCA-GA  949

seq1  GTGTACTCAGATTACTCAGACATAAAGGTAAGTAAATCTTTTT--ATTTT  997
      ||||||||||||||||||||||||||| ||||||| |||||||   ||||
seq2  GTGTACTCAGATTACTCAGACATAAAGTTAAGTAATTCTTTTTTATTTTT  999

seq1  AAAAGAAT  1005
      |||||| |
seq2  AAAAGATT  1007