BAC Information

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BAC

Clone NameB6Ng01-321N16
Chromosome13 (Build37)
Map Location 15,355,088 - 15,481,105
singlet/doubletdoublet
Overlap genenone
Upstream geneHecw1, Mrpl32, Psma2, AW209491, EG665099, LOC670994
Downstream geneEG625121, Gli3, LOC665157, Inhba, LOC625181
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321N16.bB6Ng01-321N16.g
ACCGA110855GA110856
length1,001443
definitionB6Ng01-321N16.b B6Ng01-321N16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,355,088 - 15,355,996)(15,480,657 - 15,481,105)
sequence
gaattcattagttatctatagttcttgcagcagaagtgagggctctgggg
aactcccctgtctacattagcatgctgcttaccttgttcagctcatgctt
gggcagtcatgtgggtgagattttatgagtgtagcttcctataaacattg
catacacatagagatataaacatttatatgtaattttaggtaaacataaa
ataatatgattccttaggagttttcaaacatgttcagtattgttcattac
ttctccaactctcttccctctgtattgcttgccctcaccactccccattt
aaattctccccacttttcaaatttcctacttcatagcacgtattacttct
tcttatgttctcctgagtttctcatgctcccctcacccagtatcttttgg
ttcagcccatttctattgtcactgcaggttatatatactcacatctataa
attaggagaacatgtcatctttgtctctgtggttctggattacataactt
aagatatttttccagatatatctatttacctgcaaatttcattcatcttt
acaatgggactgagttcattttcattatccatccatcagttgttagacat
ttgggttctttccatttctattgagactagaacagcaataagcacggcaa
aagaagtgactgtggagtaggatctcgagttccttgaacaaatgtcaaag
actggaatagctagtcatatagcaaaattatttttgctttctgagattta
tcctccacactgatttctacaatgtctgcagcagcagtttgtcatctcac
cacagcaaattagggctaaccttttccccatattctccccagcatttgtg
atggatgtttcttttgttagtttcatcttagccaggctgacagggtaaga
taaaacctcatatttgtataatgttttatgtctctgactgctaagaccga
tgaatgttgttgaaatatttcttagctatttttatttttttcctgaagaa
a

tataaataaacagttcacagaaaaaagaaaaccatgtttataaagataag
atgcaataaagctgagcattcacttttaacaaaagaaatatacatttaaa
ccagagaatgatttttaaatattcaactgacaaacacggaagcattaaat
aatatagagcatgaatgtgaatttcataaagcaagctctcaggggtggca
gaggtagtacacgcttttaatcctagcaccccaggagtcagagggaccag
attgctgtgagtaccagaccaaacttatctacagagtggtttccaggata
gcaagagctgtacagagaaactctgtctaaaacaaaaaccaaaaggatgg
ggagaaagagagagagagggagagagagagagagagagaagaaagaagga
aaagaaagaaagagagaaagagagagagagagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_15355088_15355996
seq2: B6Ng01-321N16.b_48_956

seq1  GAATTCATTAGTTATCTATAGTTCTTGCAGCAGAAGTGAGGGCTCTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGTTATCTATAGTTCTTGCAGCAGAAGTGAGGGCTCTGGGG  50

seq1  AACTCCCCTGTCTACATTAGCATGCTGCTTACCTTGTTCAGCTCATGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCCTGTCTACATTAGCATGCTGCTTACCTTGTTCAGCTCATGCTT  100

seq1  GGGCAGTCATGTGGGTGAGATTTTATGAGTGTAGCTTCCTATAAACATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTCATGTGGGTGAGATTTTATGAGTGTAGCTTCCTATAAACATTG  150

seq1  CATACACATAGAGATATAAACATTTATATGTAATTTTAGGTAAACATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACATAGAGATATAAACATTTATATGTAATTTTAGGTAAACATAAA  200

seq1  ATAATATGATTCCTTAGGAGTTTTCAAACATGTTCAGTATTGTTCATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGATTCCTTAGGAGTTTTCAAACATGTTCAGTATTGTTCATTAC  250

seq1  TTCTCCAACTCTCTTCCCTCTGTATTGCTTGCCCTCACCACTCCCCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAACTCTCTTCCCTCTGTATTGCTTGCCCTCACCACTCCCCATTT  300

seq1  AAATTCTCCCCACTTTTCAAATTTCCTACTTCATAGCACGTATTACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCCCCACTTTTCAAATTTCCTACTTCATAGCACGTATTACTTCT  350

seq1  TCTTATGTTCTCCTGAGTTTCTCATGCTCCCCTCACCCAGTATCTTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGTTCTCCTGAGTTTCTCATGCTCCCCTCACCCAGTATCTTTTGG  400

seq1  TTCAGCCCATTTCTATTGTCACTGCAGGTTATATATACTCACATCTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCCATTTCTATTGTCACTGCAGGTTATATATACTCACATCTATAA  450

seq1  ATTAGGAGAACATGTCATCTTTGTCTCTGTGGTTCTGGATTACATAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAGAACATGTCATCTTTGTCTCTGTGGTTCTGGATTACATAACTT  500

seq1  AAGATATTTTTCCAGATATATCTATTTACCTGCAAATTTCATTCATCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTTTCCAGATATATCTATTTACCTGCAAATTTCATTCATCTTT  550

seq1  ACAATGGGACTGAGTTCATTTTCATTATCCATCCATCAGTTGTTAGACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGGACTGAGTTCATTTTCATTATCCATCCATCAGTTGTTAGACAT  600

seq1  TTGGGTTCTTTCCATTTCTATTGAGACTAGAACAGCAATAAGCACGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTCTTTCCATTTCTATTGAGACTAGAACAGCAATAAGCACGGCAA  650

seq1  AAGAAGTGACTGTGGAGTAGGATCTCGAGTTCCTTGAACAAATGTCAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTGACTGTGGAGTAGGATCTCGAGTTCCTTGAACAAATGTCAAAG  700

seq1  ACTGGAATAGCTAGTCATATAGCAAAATTATTTTTGCTTTCTGAGATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATAGCTAGTCATATAGCAAAATTATTTTTGCTTTCTGAGATTTA  750

seq1  TCCTCCACACTGATTTCTACAATGTCTGCAGCAGCAGTTTGTCATCTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACACTGATTTCTACAATGTCTGCAGCAGCAGTTTGTCATCTCAC  800

seq1  CACAGCAAATTAGGGCTAACC-TTTCCCCATATTCTCCCCAGCATTTGTG  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CACAGCAAATTAGGGCTAACCTTTTCCCCATATTCTCCCCAGCATTTGTG  850

seq1  ATGGATGTTTCTTTTGTTAGTTTCATCTTAGCCAGGCTGACAGGGGTAAG  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGGATGTTTCTTTTGTTAGTTTCATCTTAGCCAGGCTGACA-GGGTAAG  899

seq1  ATAAAACCTC  909
      ||||||||||
seq2  ATAAAACCTC  909


seq1: chr13_15480657_15481105
seq2: B6Ng01-321N16.g_67_515 (reverse)

seq1  TCCCTCCCTCCCTCTCTCTCTCTCTTTCTCTCTTTCTTTCTTTTCCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCTCTCTCTCTCTCTTTCTCTCTTTCTTTCTTTTCCTTCT  50

seq1  TTCTTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTTTCTCCCCATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTTTCTCCCCATCCT  100

seq1  TTTGGTTTTTGTTTTAGACAGAGTTTCTCTGTACAGCTCTTGCTATCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTGTTTTAGACAGAGTTTCTCTGTACAGCTCTTGCTATCCTG  150

seq1  GAAACCACTCTGTAGATAAGTTTGGTCTGGTACTCACAGCAATCTGGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACTCTGTAGATAAGTTTGGTCTGGTACTCACAGCAATCTGGTCC  200

seq1  CTCTGACTCCTGGGGTGCTAGGATTAAAAGCGTGTACTACCTCTGCCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTCCTGGGGTGCTAGGATTAAAAGCGTGTACTACCTCTGCCACC  250

seq1  CCTGAGAGCTTGCTTTATGAAATTCACATTCATGCTCTATATTATTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAGCTTGCTTTATGAAATTCACATTCATGCTCTATATTATTTAAT  300

seq1  GCTTCCGTGTTTGTCAGTTGAATATTTAAAAATCATTCTCTGGTTTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCGTGTTTGTCAGTTGAATATTTAAAAATCATTCTCTGGTTTAAAT  350

seq1  GTATATTTCTTTTGTTAAAAGTGAATGCTCAGCTTTATTGCATCTTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTCTTTTGTTAAAAGTGAATGCTCAGCTTTATTGCATCTTATCT  400

seq1  TTATAAACATGGTTTTCTTTTTTCTGTGAACTGTTTATTTATAGAATTC  449
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACATGGTTTTCTTTTTTCTGTGAACTGTTTATTTATAGAATTC  449


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