BAC Information

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BAC

Clone NameB6Ng01-325B09
Chromosome13 (Build37)
Map Location 67,416,997 - 67,591,850
singlet/doubletdoublet
Overlap geneA230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817
Upstream geneLOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457
Downstream geneZfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325B09.bB6Ng01-325B09.g
ACCGA113236GA113237
length1,047993
definitionB6Ng01-325B09.b B6Ng01-325B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,590,802 - 67,591,850)(67,416,997 - 67,417,716)
sequence
gaattcactcttaatagaaaatttgacaagtgatatgtgataaaaaatct
tgcaaaatattcagaccttgcccaagacaaaggaaatcattgagtagaga
agccatatgcctgtgaggaatgctgagtggtttaacatgaagtcaacact
ttctaccatcaataacgttcattctgcagagaaacttgcccaactgtgga
ggaagtgacaggcttttagtgtttcttcaaaccttaaataacaatgatct
tcttcctgaacattgacgttatcatttgaaggatgtagtagaggcattag
ttatcattcaatcctgattcaacctcaataattcattcctgacagaaact
gtacttatgtgcagaaaaagaccaaggcttagctacttatgtctatataa
gcatgaaagcctaacatctgaatgcgtgctttcctggatcatagtgcctt
atgggcctatctgggggctttttctttttctttttcttctactttttctt
ttcttttctcttcttttctttctctctttttggggggatggggcattttt
ttgattgttaactggtgtagtagtgtccagacaggacaagcatcgccacc
ttggggaagtgttcctgggttacgtaaggatggggtgggcaggagactaa
tacgtcaggaagcatggcttctgcttcacttgctgccctaacttccctgg
aaaagagacagcgacatttatgttgaaataaactatttcctccccaaggt
tgtctttggtcatgccatccgtgacaccaacaaatcagtgtaggcaagca
ttagaggcatttccttccccctgccccccacccccacccccccccatacc
tcgggtgggcatccggctacacactagaggcagtgtcaccaaacctttag
atgtgttcgcctcgcaggacaccagagcttgtattctgcacaagagtctt
attcatactaagagtacaacaaaaaattttgtttccgttttttttcccaa
atttcaatactggtgaatgactttttaaagatgtagctcattgttga
gaattctttgatgatccctaaatttgtggagcatcttgacatattctttt
catttgtaaatattccctaaattatgaggtaatttatctagatataggta
tgactttataaaggaggcttttccacattcctcacttttctatagtttct
ctccataatgagttatcaaatgaggagaaagaatctggaaagttctaaag
gacttgactgatacatcccaagtatagggtttctcacctgtatggattct
ctttttttcagaaagtacttattgacaatagaaagctaggccacattctt
tatatttgtaggacttctctcgtgtatgaattttcttatgtttgtaaagt
cttgatgaataattaaagaacttgccacatacttcacacttgtagggatt
ttctcctgtatgaattatcttgtgtttagaaagtaatgatggataatgga
aggccttgccacatatttggcacttgtatggtttgtctccagtgtgaatt
ctcttatgttcagaaagggatgatggaaaacggaagacatttccacatat
ttcacacttgtatggtttctctcctgtatgaattttcttatggttggaaa
gtcttgatgggtaatgaaaggccttgtcacatacttcacacttatagggc
ttttctccaatatgaattatcttgtgtttagaaagtaatgatgcataatg
gaaggccttgccacatatgtcacactggtatggtttctcttctgtatgaa
ctttcttatggttggaaagtcttgatggataatcaaatgctttgccacat
acttcacacttgtagggattatcttctgtatgaattgtcttgtgtttaga
aagtatggatggataatggaaaggccttgccacatacttcacacttgtat
ggtttctctccggcatgaattttcttatggttgggaaagtcttgatgaat
aatggaaggccttgccacatactcacacttgtagtttctctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67590802_67591850
seq2: B6Ng01-325B09.b_48_1094 (reverse)

seq1  TCAACATGTAGCTACAGTCTTTAAAAAGTTCATCTACAGTATGAAATTTT  50
      ||||||   ||||||| ||||||||||||   ||  ||||||  || |||
seq2  TCAACAATGAGCTACA-TCTTTAAAAAGTCATTCACCAGTATTGAAATTT  49

seq1  GTGATAAAAAAACGGAAACAAAATTCTTTGTTGTACTCTTAGTATGAATA  100
      | || |||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGA-AAAAAAACGGAAACAAAATTTTTTGTTGTACTCTTAGTATGAATA  98

seq1  GGACTCTTGTGCAGTATACAAGCTCTGGTGTCCTGCCGAGGCTGAACACA  150
       ||||||||||||| |||||||||||||||||||| |||||| |||||||
seq2  AGACTCTTGTGCAGAATACAAGCTCTGGTGTCCTG-CGAGGC-GAACACA  146

seq1  TCTAAAGGTTTTGTGACACTGCCTCTAGTGTGTAGCCGGATG-CCAACCG  199
      ||||||||||| |||||||||||||||||||||||||||||| ||| |||
seq2  TCTAAAGGTTTGGTGACACTGCCTCTAGTGTGTAGCCGGATGCCCACCCG  196

seq1  AGGTAT-GGGGGGGGTGGGGGTGGGGGGCAGGGGGAAGGAAATGCCTCTA  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGGGGGGGGGTGGGGGTGGGGGGCAGGGGGAAGGAAATGCCTCTA  246

seq1  ATGCTTGCCTACACTGATTTGTTGGTGTCACGGATGGCATGACCAAAGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCCTACACTGATTTGTTGGTGTCACGGATGGCATGACCAAAGAC  296

seq1  AACCTTGGGGAGGAAATAGTTTATTTCAACATAAATGTCGCTGTCTCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGGGGAGGAAATAGTTTATTTCAACATAAATGTCGCTGTCTCTTT  346

seq1  TCCAGGGAAGTTAGGGCAGCAAGTGAAGCAGAAGCCATGCTTCCTGACGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGAAGTTAGGGCAGCAAGTGAAGCAGAAGCCATGCTTCCTGACGT  396

seq1  ATTAGTCTCCTGCCCACCCCATCCTTACGTAACCCAGGAACACTTCCCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCTCCTGCCCACCCCATCCTTACGTAACCCAGGAACACTTCCCCA  446

seq1  AGGTGGCGATGCTTGTCCTGTCTGGACACTACTACACCAGTTAACAATCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCGATGCTTGTCCTGTCTGGACACTACTACACCAGTTAACAATCA  496

seq1  AAAAAATGCCCCATCCCCCCAAAAAGAGAGAAAGAAAAGAAGAGAAAAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGCCCCATCCCCCCAAAAAGAGAGAAAGAAAAGAAGAGAAAAGA  546

seq1  AAAGAAAAAGTAGAAGAAAAAGAAAAAGAAAAAGCCCCCAGATAGGCCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAGTAGAAGAAAAAGAAAAAGAAAAAGCCCCCAGATAGGCCCA  596

seq1  TAAGGCACTATGATCCAGGAAAGCACGCATTCAGATGTTAGGCTTTCATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCACTATGATCCAGGAAAGCACGCATTCAGATGTTAGGCTTTCATG  646

seq1  CTTATATAGACATAAGTAGCTAAGCCTTGGTCTTTTTCTGCACATAAGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATAGACATAAGTAGCTAAGCCTTGGTCTTTTTCTGCACATAAGTA  696

seq1  CAGTTTCTGTCAGGAATGAATTATTGAGGTTGAATCAGGATTGAATGATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTGTCAGGAATGAATTATTGAGGTTGAATCAGGATTGAATGATA  746

seq1  ACTAATGCCTCTACTACATCCTTCAAATGATAACGTCAATGTTCAGGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGCCTCTACTACATCCTTCAAATGATAACGTCAATGTTCAGGAAG  796

seq1  AAGATCATTGTTATTTAAGGTTTGAAGAAACACTAAAAGCCTGTCACTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCATTGTTATTTAAGGTTTGAAGAAACACTAAAAGCCTGTCACTTC  846

seq1  CTCCACAGTTGGGCAAGTTTCTCTGCAGAATGAACGTTATTGATGGTAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGTTGGGCAAGTTTCTCTGCAGAATGAACGTTATTGATGGTAGA  896

seq1  AAGTGTTGACTTCATGTTAAACCACTCAGCATTCCTCACAGGCATATGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTGACTTCATGTTAAACCACTCAGCATTCCTCACAGGCATATGGC  946

seq1  TTCTCTACTCAATGATTTCCTTTGTCTTGGGCAAGGTCTGAATATTTTGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTACTCAATGATTTCCTTTGTCTTGGGCAAGGTCTGAATATTTTGC  996

seq1  AAGATTTTTTATCACATATCACTTGTCAAATTTTCTATTAAGAGTGAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTTTATCACATATCACTTGTCAAATTTTCTATTAAGAGTGAATT  1046

seq1  C  1049
      |
seq2  C  1047

seq1: chr13_67416997_67417716
seq2: B6Ng01-325B09.g_71_790

seq1  GAATTCTTTGATGATCCCTAAATTTGTGGAGCATCTTGACATATTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATGATCCCTAAATTTGTGGAGCATCTTGACATATTCTTTT  50

seq1  CATTTGTAAATATTCCCTAAATTATGAGGTAATTTATCTAGATATAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTAAATATTCCCTAAATTATGAGGTAATTTATCTAGATATAGGTA  100

seq1  TGACTTTATAAAGGAGGCTTTTCCACATTCCTCACTTTTCTATAGTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTATAAAGGAGGCTTTTCCACATTCCTCACTTTTCTATAGTTTCT  150

seq1  CTCCATAATGAGTTATCAAATGAGGAGAAAGAATCTGGAAAGTTCTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAATGAGTTATCAAATGAGGAGAAAGAATCTGGAAAGTTCTAAAG  200

seq1  GACTTGACTGATACATCCCAAGTATAGGGTTTCTCACCTGTATGGATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGACTGATACATCCCAAGTATAGGGTTTCTCACCTGTATGGATTCT  250

seq1  CTTTTTTTCAGAAAGTACTTATTGACAATAGAAAGCTAGGCCACATTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTCAGAAAGTACTTATTGACAATAGAAAGCTAGGCCACATTCTT  300

seq1  TATATTTGTAGGACTTCTCTCGTGTATGAATTTTCTTATGTTTGTAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGTAGGACTTCTCTCGTGTATGAATTTTCTTATGTTTGTAAAGT  350

seq1  CTTGATGAATAATTAAAGAACTTGCCACATACTTCACACTTGTAGGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGAATAATTAAAGAACTTGCCACATACTTCACACTTGTAGGGATT  400

seq1  TTCTCCTGTATGAATTATCTTGTGTTTAGAAAGTAATGATGGATAATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGTATGAATTATCTTGTGTTTAGAAAGTAATGATGGATAATGGA  450

seq1  AGGCCTTGCCACATATTTGGCACTTGTATGGTTTGTCTCCAGTGTGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTGCCACATATTTGGCACTTGTATGGTTTGTCTCCAGTGTGAATT  500

seq1  CTCTTATGTTCAGAAAGGGATGATGGAAAACGGAAGACATTTCCACATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATGTTCAGAAAGGGATGATGGAAAACGGAAGACATTTCCACATAT  550

seq1  TTCACACTTGTATGGTTTCTCTCCTGTATGAATTTTCTTATGGTTGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTTGTATGGTTTCTCTCCTGTATGAATTTTCTTATGGTTGGAAA  600

seq1  GTCTTGATGGGTAATGAAAGGCCTTGTCACATACTTCACACTTATAGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGATGGGTAATGAAAGGCCTTGTCACATACTTCACACTTATAGGGC  650

seq1  TTTTCTCCAATATGAATTATCTTGTGTTTAGAAAGTAATGATGCATAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCAATATGAATTATCTTGTGTTTAGAAAGTAATGATGCATAATG  700

seq1  GAAGGCCTTGCCACATATGT  720
      ||||||||||||||||||||
seq2  GAAGGCCTTGCCACATATGT  720