BAC Information

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BAC

Clone NameB6Ng01-325E17
Chromosome13 (Build37)
Map Location 8,397,641 - 8,554,885
singlet/doubletdoublet
Overlap geneAdarb2, EG666941
Upstream geneLOC791083, LOC382722
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325E17.bB6Ng01-325E17.g
ACCGA113389GA113390
length1,0261,027
definitionB6Ng01-325E17.b B6Ng01-325E17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,397,641 - 8,398,616)(8,554,261 - 8,554,885)
sequence
gaattctctctgtagatcaggctagccttaaactcacagatctgcctgcc
ttaccttcccagtgctgggaccaaaggtgtgtgctaccactgcctggctg
atactaatcattttaaattactttaagcctacaaaagattaaaaacaaag
caaaacatgtatccgtgcaatctttgtattttacatacatatctccgtga
atgaactttgcatgtaaactttatatgtgatctagactttacaaatatgg
tacgctttaggtatgatttgagggttgccagaggaagatcttgaattgaa
gtttgctctccattttaaaataaagggggaagggaaaattaaactaataa
gggattctctccgccgagcccccgtgatggcattcagaagtgaggcctta
ggaagtaattagatatgagacggtcccgagggtcagaggccacctaactg
agtttggggaattttacagggggaagtgttgcaggattttctctatccaa
tcacattagggcagtgggaggcctgtgattggacagcaaaggggaggcag
agctatgagttgtggagacagagagatctcaggaggagaagggggagaag
ccaacatgggggcagacagacaggaagatgatcctgatcccgtgtggttt
taaacagccacaagtagctaagattttcacaaggttagaatagttagaga
aaagcttttatcattatcaattggctctaaaattattgtattggcatctt
gtaaattgtgctattaatgttatataaatctgactggataattaagcttt
aagagtcatgtttctatcgggtaattaggtgttgagatggcttgatcatg
gggtgtgtggggcaattcgtggcagtgagaggaactggagggctggaggg
tggacggacatctgagagatggccttgtggcggcatggggctggagagct
gatgggtgagagactgagcagtgagatcgatcaccttgcgttgagggcta
ccttcagagagttgttggcagcaggg

gaattccaggctcccttgggctacagagtgagaccaggcctaaaaaaaat
ccaaaaccaaaacaaagaccaaatcaaccaaccaaacacataagaactaa
taccctattgtattttttacaatacaaaataaagcataaaaaaaacccag
aaaaaatatgagtagctaattaaaaagacaagggaagagcaggtgccata
tgggataaattggaaggaaatcggcagtttgcttcaaacacattggagat
gagtgtgtatggacagatataccatgaaggtataatcacaaggaagggtg
atgactgaattaacaacagatatcgtaagtcttgagattcaggaaattcc
catgaattaaaaagtcatgaaatcacaataaaccattaaaaggacatcct
tgagagtgcattcacttagagtttcaagcagcatgaatcaaaaactagca
aacgtaagctgaagggtagacaaatacatgaccaatgagattttagcatt
cctctcagttctggggagaaaaagcagggcagagagatggtgtgcaggag
aggctgaagcaagctcagagctagcctgatctcagtggcatgcgcagaat
actctgatcaacaagagaggtgtgtactttcatctcacggtatcacagca
cacttattgagagagataatctgcttagaaaaaaaaacaaaacaggtcct
aataaatttcaaaggactgaaatcacaaggtaaatatgattaaatcaaat
gttcataaataaaagtccaactaaacaaaaatttaataagcataaaccat
actgttaaaatcaaaacagaatctccagactgggattatgtgcttatagt
ccccagagtttatctgtatccagagtgtaagaatctttctaacttaataa
ctaaaggttataaaatacaacttctaaaagtggtcacgatatttgaacag
aaatttcacaatagaaaagaatgttattgccaataaattcaccaagttgt
attaactggcagtatggcttggggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8397641_8398616
seq2: B6Ng01-325E17.b_43_1017

seq1  GAATTCTCTCTGTAGATCAGGCTAGCCTTAAACTCACAGATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTAGATCAGGCTAGCCTTAAACTCACAGATCTGCCTGCC  50

seq1  TTACCTTCCCAGTGCTGGGACCAAAGGTGTGTGCTACCACTGCCTGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTCCCAGTGCTGGGACCAAAGGTGTGTGCTACCACTGCCTGGCTG  100

seq1  ATACTAATCATTTTAAATTACTTTAAGCCTACAAAAGATTAAAAACAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAATCATTTTAAATTACTTTAAGCCTACAAAAGATTAAAAACAAAG  150

seq1  CAAAACATGTATCCGTGCAATCTTTGTATTTTACATACATATCTCCGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATGTATCCGTGCAATCTTTGTATTTTACATACATATCTCCGTGA  200

seq1  ATGAACTTTGCATGTAAACTTTATATGTGATCTAGACTTTACAAATATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTTGCATGTAAACTTTATATGTGATCTAGACTTTACAAATATGG  250

seq1  TACGCTTTAGGTATGATTTGAGGGTTGCCAGAGGAAGATCTTGAATTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTTTAGGTATGATTTGAGGGTTGCCAGAGGAAGATCTTGAATTGAA  300

seq1  GTTTGCTCTCCATTTTAAAATAAAGGGGGAAGGGAAAATTAAACTAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTCTCCATTTTAAAATAAAGGGGGAAGGGAAAATTAAACTAATAA  350

seq1  GGGATTCTCTCCGCCGAGCCCCCGTGATGGCATTCAGAAGTGAGGCCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCTCTCCGCCGAGCCCCCGTGATGGCATTCAGAAGTGAGGCCTTA  400

seq1  GGAAGTAATTAGATATGAGACGGTCCCGAGGGTCAGAGGCCACCTAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAATTAGATATGAGACGGTCCCGAGGGTCAGAGGCCACCTAACTG  450

seq1  AGTTTGGGGAATTTTACAGGGGGAAGTGTTGCAGGATTTTCTCTATCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGGGAATTTTACAGGGGGAAGTGTTGCAGGATTTTCTCTATCCAA  500

seq1  TCACATTAGGGCAGTGGGAGGCCTGTGATTGGACAGCAAAGGGGAGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTAGGGCAGTGGGAGGCCTGTGATTGGACAGCAAAGGGGAGGCAG  550

seq1  AGCTATGAGTTGTGGAGACAGAGAGATCTCAGGAGGAGAAGGGGGAGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGAGTTGTGGAGACAGAGAGATCTCAGGAGGAGAAGGGGGAGAAG  600

seq1  CCAACATGGGGGCAGACAGACAGGAAGATGATCCTGATCCCGTGTGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATGGGGGCAGACAGACAGGAAGATGATCCTGATCCCGTGTGGTTT  650

seq1  TAAACAGCCACAAGTAGCTAAGATTTTCACAAGGTTAGAATAGTTAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGCCACAAGTAGCTAAGATTTTCACAAGGTTAGAATAGTTAGAGA  700

seq1  AAAGCTTTTATCATTATCAATTGGCTCTAAAATTATTGTATTGGCATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTTATCATTATCAATTGGCTCTAAAATTATTGTATTGGCATCTT  750

seq1  GTAAATTGTGCTATTAATGTTATATAAATCTGACTGGATAATTAAGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTGTGCTATTAATGTTATATAAATCTGACTGGATAATTAAGCTTT  800

seq1  AAGAGTCATGTTTCTATCGGGTAATTAGGTGTTGAGATGGCTTGATCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCATGTTTCTATCGGGTAATTAGGTGTTGAGATGGCTTGATCATG  850

seq1  GGGTGTGTGGGGCAATTCGTGGCAGTGAGAGGAACTGGAGGGCTGGAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGTGGGGCAATTCGTGGCAGTGAGAGGAACTGGAGGGCTGGAGGG  900

seq1  TGGACGGACATCTGAGAGATGGCCTTGTGGCGGCATGGGGCTGGAGAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACGGACATCTGAGAGATGGCCTTGTGGCGGCATGGGGCTGGAGAGCT  950

seq1  GATGGGTGAGAGACTGAGCAAGTGAG  976
      ||||||||||||||||||| ||||||
seq2  GATGGGTGAGAGACTGAGC-AGTGAG  975


seq1: chr13_8554261_8554885
seq2: B6Ng01-325E17.g_68_692 (reverse)

seq1  ACACACCTCTCTTGTTGATCAGAGTATTCTGCGCATGCCACTGAGATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTCTCTTGTTGATCAGAGTATTCTGCGCATGCCACTGAGATCAG  50

seq1  GCTAGCTCTGAGCTTGCTTCAGCCTCTCCTGCACACCATCTCTCTGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTCTGAGCTTGCTTCAGCCTCTCCTGCACACCATCTCTCTGCCCT  100

seq1  GCTTTTTCTCCCCAGAACTGAGAGGAATGCTAAAATCTCATTGGTCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTCTCCCCAGAACTGAGAGGAATGCTAAAATCTCATTGGTCATGT  150

seq1  ATTTGTCTACCCTTCAGCTTACGTTTGCTAGTTTTTGATTCATGCTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTACCCTTCAGCTTACGTTTGCTAGTTTTTGATTCATGCTGCTT  200

seq1  GAAACTCTAAGTGAATGCACTCTCAAGGATGTCCTTTTAATGGTTTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTAAGTGAATGCACTCTCAAGGATGTCCTTTTAATGGTTTATTG  250

seq1  TGATTTCATGACTTTTTAATTCATGGGAATTTCCTGAATCTCAAGACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATGACTTTTTAATTCATGGGAATTTCCTGAATCTCAAGACTTA  300

seq1  CGATATCTGTTGTTAATTCAGTCATCACCCTTCCTTGTGATTATACCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATATCTGTTGTTAATTCAGTCATCACCCTTCCTTGTGATTATACCTTC  350

seq1  ATGGTATATCTGTCCATACACACTCATCTCCAATGTGTTTGAAGCAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATATCTGTCCATACACACTCATCTCCAATGTGTTTGAAGCAAACT  400

seq1  GCCGATTTCCTTCCAATTTATCCCATATGGCACCTGCTCTTCCCTTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGATTTCCTTCCAATTTATCCCATATGGCACCTGCTCTTCCCTTGTCT  450

seq1  TTTTAATTAGCTACTCATATTTTTTCTGGGTTTTTTTTATGCTTTATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTAGCTACTCATATTTTTTCTGGGTTTTTTTTATGCTTTATTTT  500

seq1  GTATTGTAAAAAATACAATAGGGTATTAGTTCTTATGTGTTTGGTTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTAAAAAATACAATAGGGTATTAGTTCTTATGTGTTTGGTTGGTT  550

seq1  GATTTGGTCTTTGTTTTGGTTTTGGATTTTTTTTAGGCCTGGTCTCACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGTCTTTGTTTTGGTTTTGGATTTTTTTTAGGCCTGGTCTCACTC  600

seq1  TGTAGCCCAAGGGAGCCTGGAATTC  625
      |||||||||||||||||||||||||
seq2  TGTAGCCCAAGGGAGCCTGGAATTC  625


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