BAC Information

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BAC

Clone NameB6Ng01-325L09
Chromosome13 (Build37)
Map Location 74,803,458 - 74,804,675
singlet/doubletsinglet
Overlap geneArts1
Upstream geneSlc6a18, Slc6a19, Slc12a7, Nkd2, EG666360, Trip13, Brd9, Zdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72, Slc9a3, Exoc3, Ahrr, Pdcd6, Sdha, Ccdc127, AI595366, Zfp72, LOC666670, LOC634386, LOC100042547, LOC666683, LOC547136, BC012278, LOC434490
Downstream geneCast, LOC622204, EG544954, Pcsk1, LOC672443, LOC666764, LOC100042606, LOC100042986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325L09.bB6Ng01-325L09.g
ACCGA113700GA113701
length1,2081,023
definitionB6Ng01-325L09.b B6Ng01-325L09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtcctgttctgcaggccaagccttcctcctttcattcttttt
acatttttacccctttatttctgttctctatgtcaataggaagactattt
ctttggcaagtgttttaatgcaatggaagttgatgcattaaactcctctc
accctgtatccacacctgtggagaatcctgcgcagattcgggagatgttt
gatgatgtttcttatgaaaaggtaaaggcagattgcagtgatgcagtttg
gacactaagttcattagtagttgaatagagagtttatagttcaggtgtgg
gatagcttgaagttgtgtgggccacagtcctattagagggacttatggta
tggtttaaaatcttaaaaaactaaatgcacctgcattgaaatgtatacaa
actacagatagtaatatttttcttatcttttcagggagcttgtattctga
atatgctaagagattatctgagtgcagatacatttaaaagaggaattgta
cagtatctccaaaagtatagttataaaaacacaaaaaacgaggacctgtg
gaatagcatgatgcatgtgagtggtactcaaaagctttgcatttggggct
ggttagctgactgcattgttttgttttgtcctgtattatggtattccatc
ccaatgaaccaaagcactttctagagaaatgagagtgacttgttattttt
ggttttagatttgccctacagatggcacacaaacaatggatggcttctgc
tctagaagccaacactcatcatcaacctcagtaagtctctcagcctgtcc
ctgtccactcatgcatgtcctccatattctttcagtggtatctctgccaa
atttttgaggttctcagttaaatcactctcatctcaggtggtctgcattc
aaattgaagcaggctaacagtcttttaaagattttcctaagaatcatata
tgcaagagatgtccaatcttaaggacagaacttcccacaaacactaattg
ctttcactgtactctctctaaaacaatggatttaggacagtttcagtgga
tggtttaagactgaattgcatcagtcattctagaggcactgcatttgaaa
atgacaaatgcaagaaaaaatcatgtgatcagccatataatgtcttttac
tccttcaacgaacccatgactaagtcattattgttcagtctttgaatgta
gataatgg
gaattcaactgagtgtgctcatctctaagaattgtgttgagaaaatacaa
attcaattgatgagtgggtttagtttgtgtcagcgcagaaaaaatggctg
attgaaataattctagcatttgttatgcaacagataatatgaatctggga
tgtgtatgcttagtaatgatggtatttaacataaatccctgtcatcctcc
tatctagagactagttagatattcattatggtttcccagacatgagagca
gccaaggaaaatgagtcatgctgtatatgaccttaacaattgagtcaggt
tcttcagcattggttgctgtcctgtggttcctgtcctttttccactctgt
agacctttgcattaggctaatttttcatacacaaattttaattctttcca
tagcaaacatcttgattccaatttttaaaaatctagatgaatttcttgga
caaatcagtaacctacagattggggaaaaaaatcttcactaactccacat
ccaatagagggctaatattcaaaatgtataaagaactcaaaaggctaacc
accaaaaaacccaaacaacccaatcagtaaatgaaaagaatggatacagg
aaaatgtggtttatttacacaatggaatactactcagttatttagaatga
tgacttcatgcattttggaggcaaatgaactagaaaatatcatccttagt
gaggtcactcagccccaaaaggacatgcatgttatgtactcagtaataag
tggatattagccaaaaaagtgcagaatacccaggatacaatccacagaac
tcaaggttaacaagcccaaggatacaagtgaggatgcctcaatcccactt
gggaggaagaagaaaacaatcacaggaggggagacagaacaagagtcctg
ggtggtaaagaggacaggggaggaagaggggaacatgagaaggtattggt
agtggccctcaaaaaaaggaacacgcaatctttaaagtaagatattatgt
gtatccttctaaaatatcacaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_74803458_74804675
seq2: B6Ng01-325L09.b_45_1252

seq1  GAATTCTTGTCCTGTTCTGCAGGCCAAGCCTTCCTCCTTTCATTCTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCCTGTTCTGCAGGCCAAGCCTTCCTCCTTTCATTCTTTTT  50

seq1  ACATTTTTACCCCTTTATTTCTGTTCTCTATGTCAATAGGAAGACTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTACCCCTTTATTTCTGTTCTCTATGTCAATAGGAAGACTATTT  100

seq1  CTTTGGCAAGTGTTTTAATGCAATGGAAGTTGATGCATTAAACTCCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCAAGTGTTTTAATGCAATGGAAGTTGATGCATTAAACTCCTCTC  150

seq1  ACCCTGTATCCACACCTGTGGAGAATCCTGCGCAGATTCGGGAGATGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTATCCACACCTGTGGAGAATCCTGCGCAGATTCGGGAGATGTTT  200

seq1  GATGATGTTTCTTATGAAAAGGTAAAGGCAGATTGCAGTGATGCAGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGTTTCTTATGAAAAGGTAAAGGCAGATTGCAGTGATGCAGTTTG  250

seq1  GACACTAAGTTCATTAGTAGTTGAATAGAGAGTTTATAGTTCAGGTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTAAGTTCATTAGTAGTTGAATAGAGAGTTTATAGTTCAGGTGTGG  300

seq1  GATAGCTTGAAGTTGTGTGGGCCACAGTCCTATTAGAGGGACTTATGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTTGAAGTTGTGTGGGCCACAGTCCTATTAGAGGGACTTATGGTA  350

seq1  TGGTTTAAAATCTTAAAAAACTAAATGCACCTGCATTGAAATGTATACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAAAATCTTAAAAAACTAAATGCACCTGCATTGAAATGTATACAA  400

seq1  ACTACAGATAGTAATATTTTTCTTATCTTTTCAGGGAGCTTGTATTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGATAGTAATATTTTTCTTATCTTTTCAGGGAGCTTGTATTCTGA  450

seq1  ATATGCTAAGAGATTATCTGAGTGCAGATACATTTAAAAGAGGAATTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTAAGAGATTATCTGAGTGCAGATACATTTAAAAGAGGAATTGTA  500

seq1  CAGTATCTCCAAAAGTATAGTTATAAAAACACAAAAAACGAGGACCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCTCCAAAAGTATAGTTATAAAAACACAAAAAACGAGGACCTGTG  550

seq1  GAATAGCATGATGCATGTGAGTGGTACTCAAAAGCTTTGCATTTGGGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCATGATGCATGTGAGTGGTACTCAAAAGCTTTGCATTTGGGGCT  600

seq1  GGTTAGCTGACTGCATTGTTTTGTTTTGTCCTGTATTATGGTATTCCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGCTGACTGCATTGTTTTGTTTTGTCCTGTATTATGGTATTCCATC  650

seq1  CCAATGAACCAAAGCACTTTCTAGAGAAATGAGAGTGACTTGTTATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAACCAAAGCACTTTCTAGAGAAATGAGAGTGACTTGTTATTTTT  700

seq1  GGTTTTAGATTTGCCCTACAGATGGCACACAAACAATGGATGGCTTCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAGATTTGCCCTACAGATGGCACACAAACAATGGATGGCTTCTGC  750

seq1  TCTAGAAGCCAACACTCATCATCAACCTCAGTAAGTCTCTCAGCCTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAGCCAACACTCATCATCAACCTCAGTAAGTCTCTCAGCCTGTCC  800

seq1  CTGTCCACTCATGCATGTCCTCCATATTCTTTCAGTGGTATCTCTGCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCACTCATGCATGTCCTCCATATTCTTTCAGTGGTATCTCTGCCAA  850

seq1  ATTTTTGAGGTTCTCAGTTAAATCACTCTCATCTCAGGGTGGTCTGCATT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATTTTTGAGGTTCTCAGTTAAATCACTCTCATCTCA-GGTGGTCTGCATT  899

seq1  CAAATTGAAGCAGGCTAACAGTCTTTTAAAGATTTTCCTAAGAATCATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGAAGCAGGCTAACAGTCTTTTAAAGATTTTCCTAAGAATCATAT  949

seq1  ATGCAAGAGGATGTCCCAATCTTAGGGACAGAACTTCCCACAAACACTAA  1000
      |||||||| ||||| ||||||||| |||||||||||||||||||||||||
seq2  ATGCAAGA-GATGT-CCAATCTTAAGGACAGAACTTCCCACAAACACTAA  997

seq1  TTGCTTTCACTGTACTCTCTCTAAAACAATGGATTTAGGACAAGTTTCAG  1050
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTGCTTTCACTGTACTCTCTCTAAAACAATGGATTTAGGAC-AGTTTCAG  1046

seq1  TGGATGG-TTAAGACTGAATTGCATCAGTCATTTCTAGA-GCACTGCATT  1098
      ||||||| ||||||||||||||||||||||| ||||||| ||||||||||
seq2  TGGATGGTTTAAGACTGAATTGCATCAGTCA-TTCTAGAGGCACTGCATT  1095

seq1  TGAAAAATGACAAATGGCAGAGAAAAATCAATGTGATCAGGCATATAATG  1148
      || |||||||||||||  ||| ||||||| |||||||||| |||||||||
seq2  TG-AAAATGACAAATGCAAGA-AAAAATC-ATGTGATCAGCCATATAATG  1142

seq1  TCCTTTACTTCTCTCAACAGACCCATGAACTAAGTGCTATTATTGTTCAG  1198
      || |||||| || |||||  ||||||| |||||||   ||||||||||| 
seq2  TCTTTTACTCCT-TCAACGAACCCATG-ACTAAGT--CATTATTGTTCA-  1187

seq1  GTCTTTAAATGTAG-TAATGG  1218
      |||||| ||||||| ||||||
seq2  GTCTTTGAATGTAGATAATGG  1208