BAC Information

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BAC

Clone NameB6Ng01-325M24
Chromosome15 (Build37)13 (Build37)
Map Location 28,050,653 - 28,051,59777,243,791 - 77,244,852
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAnk, BC087945, LOC100040622, BC052328, Trio
Downstream geneLOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325M24.bB6Ng01-325M24.g
ACCGA113774GA113775
length1,0951,061
definitionB6Ng01-325M24.b B6Ng01-325M24.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(28,050,653 - 28,051,597)(77,243,791 - 77,244,852)
sequence
gaattcaaaaagttacgactcgcaaagaaccaaataaccctattaaaaat
tggggtacagagctaaagaaagaattcttaactgcggaataccaaatagc
tgagaagcacctaaagaaatgttcaacattcttagtcatcagggaaatgg
aaaagcaattggacagaggaaaaaaagggaaacagaaacatatggagagg
ccccaagggggattaaaaggagtcaaggaatgacggacaccagcagggcc
accccaaccccctaccccacccctcctccacacctggctccaaacaaaac
tgaaggactttacagtgacaatgtctgactctttctggtatatcattctt
tgaataaaacacagaggaactgttttgatttgaggcttaataaagatatg
ccaaacataaaacaccaattagctccccctttgataaactccatgctctt
ccctgggagtgattatctaacatgcacagggatttgatcctcgccagtgg
acaggacttggggctcaacctccacctcagaccttataccaaagttaacg
tatacatatttacatctctaaaacaaaaacacaaagcttaacattattaa
gaaagtagataacagctttgtgattttagttcaggtatagatttcttggc
caagtatgaaccataaaagaagacctgagtttggtccccagcacacaaac
ctcatcgctcacaacctcctgtaactccaagtccaggagtgacatcatcc
tctaccatcgtgtgggcacagtattcacattcgcacatggcaagacagat
acgcatattttaagataaaagcaaacaagaaaaaatgataagccagattt
tatgagaatctacattttctaatcttcaaaaactcttattacaaatatga
aagtccaagccagaagtagaaaatactcacaatatctgacatttattgta
ttgaaaagagagtaataaattttacaactgaagaaatatttgagtaaata
aatcactggaagaatatataaaactgtctgggaagcatgaaggcttgctt
acttatcgtagtcagcagggaatcacatttaatttttgtagtgag
gaattcacttgaaaaatcagacaacagaaaaaaaaaaaaaaaaaaaaaaa
aacaggaagactgcagctcttgtgcagtatttcagacattagtgataaac
aacagcaaaagtaatactagttctagtgtagaaaagcaaatgttcatttc
atgctatgtttaataggtttattttgttagtttatcaagtcaaaactcag
tagttactaagtctaaactgaaagatttttatgtttaaattgaaactcac
tgtattcatggtaggaaatttgaaagttttttaattctgcagtttcttat
gacatgacatgattggctaaaactttatagaattaaaatactttatcagt
tttgctccttgtcttcctgaatacagtgatatttgtgtgcccatttagac
ttccttctgtgaccatgtttgcaagtttcataagagaatttttaaattga
tttgtcggatttgtgcaatataacttcatatgaacagtgtttacatgtat
caaaagagtgtaaactacggaagttaccacagttgattctgtttttttat
taaacagaaaaatatatgtttttctaaaagataaagaaatcagtaaaata
aatatacgagaatatacatgcaactaacaaatttttcatatctaaaaata
gtttgtaatactctatcctcagaattaaattagtaagtacatctggtaag
ttactacttataaaatgtggcaaactaaagcatttgttttctggtctgtt
ttgtataagaacgatgtattaaaactcactttatatgttaagtttaatgt
catgtgtgttttataaacctactttcctgaaatttttttattatgacttc
tattagttgtggtgaagctatattatatataacccgagagtataattatt
tttatatacatgcagaataaaatgaagatcatataaaatgttactgatag
atttgttctgactgaacatcacaaaagacaattcaagacttcagaacacg
atatacgatctgttaaaaagagcaatacactcagaagacatggaactgga
gaatcaagtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_28050653_28051597
seq2: B6Ng01-325M24.b_192_1137 (reverse)

seq1  CTCACTACAAAAA-TAAATGTGATTTCCCTGCTGACTAACGAT-AGTAAG  48
      ||||||||||||| ||||||||| ||||||||||||| ||||| ||||||
seq2  CTCACTACAAAAATTAAATGTGA-TTCCCTGCTGACT-ACGATAAGTAAG  48

seq1  CAAGCTTTCATGCTT-CCAGACATTTTTATATATTCTT-CAGTGATTTAT  96
      ||||| ||||||||| ||||||| |||||||||||||| |||||||||||
seq2  CAAGCCTTCATGCTTCCCAGACAGTTTTATATATTCTTCCAGTGATTTAT  98

seq1  TTACTCAAATATTTCTTCAGTTGTAAAATTTATTACTCTCTTTTTCAATA  146
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTACTCAAATATTTCTTCAGTTGTAAAATTTATTACTCTC-TTTTCAATA  147

seq1  CAATAATTGTCAGATATTGTGAGTATTTTCTACTTCTGGCTTGGACTTTC  196
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGTCAGATATTGTGAGTATTTTCTACTTCTGGCTTGGACTTTC  197

seq1  ATATTTGTAATAAGAGTTTTTGAAGATTAGAAAATGTAGATTCTCATAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTAATAAGAGTTTTTGAAGATTAGAAAATGTAGATTCTCATAAA  247

seq1  ATCTGGCTTATCATTTTTTCTTGTTTGCTTTTATCTTAAAATATGCGTAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCTTATCATTTTTTCTTGTTTGCTTTTATCTTAAAATATGCGTAT  297

seq1  CTGTCTTGCCATGTGCGAATGTGAATACTGTGCCCACACGATGGTAGAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTGCCATGTGCGAATGTGAATACTGTGCCCACACGATGGTAGAGG  347

seq1  ATGATGTCACTCCTGGACTTGGAGTTACAGGAGGTTGTGAGCGATGAGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTCACTCCTGGACTTGGAGTTACAGGAGGTTGTGAGCGATGAGGT  397

seq1  TTGTGTGCTGGGGACCAAACTCAGGTCTTCTTTTATGGTTCATACTTGGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCTGGGGACCAAACTCAGGTCTTCTTTTATGGTTCATACTTGGC  447

seq1  CAAGAAATCTATACCTGAACTAAAATCACAAAGCTGTTATCTACTTTCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAATCTATACCTGAACTAAAATCACAAAGCTGTTATCTACTTTCTT  497

seq1  AATAATGTTAAGCTTTGTGTTTTTGTTTTAGAGATGTAAATATGTATACG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTTAAGCTTTGTGTTTTTGTTTTAGAGATGTAAATATGTATACG  547

seq1  TTAACTTTGGTATAAGGTCTGAGGTGGAGGTTGAGCCCCAAGTCCTGTCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTGGTATAAGGTCTGAGGTGGAGGTTGAGCCCCAAGTCCTGTCC  597

seq1  ACTGGCGAGGATTAAATCCCTGTGCATGTTAGATAATCACTCCCAGGGAA  646
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACTGGCGAGGATCAAATCCCTGTGCATGTTAGATAATCACTCCCAGGGAA  647

seq1  GAGCATGGAGTTTATCAAAGGGGGAGCTAATTGGTGTTTTATGTTTGGCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGGAGTTTATCAAAGGGGGAGCTAATTGGTGTTTTATGTTTGGCA  697

seq1  TATCTTTATTAAGCCTCAAATCAAAACAGTTCCTCTGTGTTTTATTCAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTATTAAGCCTCAAATCAAAACAGTTCCTCTGTGTTTTATTCAAA  747

seq1  GAATGATATACCAGAAAGAGTCAGACATTGTCACTGTAAAGTCCTTCAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATATACCAGAAAGAGTCAGACATTGTCACTGTAAAGTCCTTCAGT  797

seq1  TCTGTTTGGAGCCAGGTGTGGAGGAGGGGTGGGGTAGGGGGTTGGGGTGG  846
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGGAGCCAGGTGTGGAGGAGGGGTGGGGTAGGGGGTTGGGGTGG  847

seq1  CCCTGCTGGTGTCTGTCATTCCTTGACTCCTTTTAATCCCCCTTGGGGCC  896
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGGTGTCCGTCATTCCTTGACTCCTTTTAATCCCCCTTGGGGCC  897

seq1  TCTAATTATGTTTCTGTTTCCCTTTTTTTCCTCTGTCCAATTGCTTTTC  945
      |||   |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATATGTTTCTGTTTCCCTTTTTTTCCTCTGTCCAATTGCTTTTC  946

seq1: chr13_77243791_77244852
seq2: B6Ng01-325M24.g_64_1124 (reverse)

seq1  TTACCTGATTCTCAAG-TCCATGTCTTCTGAGTGTATTTCTCTTTTTAAC  49
      |||| |||||||| || ||||||||||||||||||||| |||||||||||
seq2  TTACTTGATTCTCCAGTTCCATGTCTTCTGAGTGTATTGCTCTTTTTAAC  50

seq1  AGATCTTATATC-TTTTCTGAAGTCTTTGAATTTTTTTTTGTGATGTTCA  98
      ||||| |||||| | |||||||||| ||||||| | ||||||||||||||
seq2  AGATCGTATATCGTGTTCTGAAGTC-TTGAATTGTCTTTTGTGATGTTCA  99

seq1  CTCAGAACAAATCTATCACTAACATTTTTATTATGATTTTCCATTTTATT  148
       ||||||||||||||||| |||||||||   |||||| || |||||||||
seq2  GTCAGAACAAATCTATCAGTAACATTTT--ATATGATCTT-CATTTTATT  146

seq1  CTGCATGTATATAAAAATAATTATACTCTC-GGTTATATATAATATAGCT  197
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGCATGTATATAAAAATAATTATACTCTCGGGTTATATATAATATAGCT  196

seq1  TCACCACAACTAATAGAAGTCATAATAAAAAAATTTCAGGAAAGTAGGTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACAACTAATAGAAGTCATAATAAAAAAATTTCAGGAAAGTAGGTT  246

seq1  TATAAAACACACATGACATTAAACTTAAAATATAAAGTGAGTTTTAATAC  297
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATAAAACACACATGACATTAAACTTAACATATAAAGTGAGTTTTAATAC  296

seq1  ATCGTTCTTATACAAAACAGACCAGAAAACAAATGCTTTAGTTTGCCACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTCTTATACAAAACAGACCAGAAAACAAATGCTTTAGTTTGCCACA  346

seq1  TTTTATAAGTAGTAACTTACCAGATGTACTTACTAATTTAATTCTGAGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAGTAGTAACTTACCAGATGTACTTACTAATTTAATTCTGAGGA  396

seq1  TAGAGTATTACAAACTATTTTTAGATATGAAAAATTTGTTAGTTGCATGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTATTACAAACTATTTTTAGATATGAAAAATTTGTTAGTTGCATGT  446

seq1  ATATTCTCGTATATTTATTTTAATGATTTCTTTATCTTTTAGAAAAACAT  497
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATATTCTCGTATATTTATTTTACTGATTTCTTTATCTTTTAGAAAAACAT  496

seq1  ATATTTTTCTGTTTAATAAAAAAACAGAATCAACTGTGGTAACTTCCGTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCTGTTTAATAAAAAAACAGAATCAACTGTGGTAACTTCCGTA  546

seq1  GTTTACACTCTTTTGATACATGTAAACACTGTTCATATGAAGTTATATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACACTCTTTTGATACATGTAAACACTGTTCATATGAAGTTATATTG  596

seq1  CACAAATCAGACAAATCAATTTAAAAATTCTCTTATGAAACTTGCAAACA  647
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATCCGACAAATCAATTTAAAAATTCTCTTATGAAACTTGCAAACA  646

seq1  TGGTCACAGAAGGAAGTCTAAATGGGCACACAAATATCACTGTATTCAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACAGAAGGAAGTCTAAATGGGCACACAAATATCACTGTATTCAGG  696

seq1  AAGACAAGGAGCAAAACTGATAAAGTATTTTAATTCTATAAAGTTTTAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGGAGCAAAACTGATAAAGTATTTTAATTCTATAAAGTTTTAGC  746

seq1  CAATCATGTCATGTCATAAGAAACTGCAGAATTAAAAAACTTTCAAATTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGTCATGTCATAAGAAACTGCAGAATTAAAAAACTTTCAAATTT  796

seq1  CCTACCATGAATACAGTGAGTTTCAATTTAAACATAAAAATCTTTCAGTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCATGAATACAGTGAGTTTCAATTTAAACATAAAAATCTTTCAGTT  846

seq1  TAGACTTAGTAACTACTGAGTTTTGACTTGATAAACTAACAAAATAAACC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTAGTAACTACTGAGTTTTGACTTGATAAACTAACAAAATAAACC  896

seq1  TATTAAACATAGCATGAAATGAACATTTGCTTTTCTACACTAGAACTAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAACATAGCATGAAATGAACATTTGCTTTTCTACACTAGAACTAGT  946

seq1  ATTACTTTTGCTGTTGTTTATCACTAATGTCTGAAATACTGCACAAGAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTTGCTGTTGTTTATCACTAATGTCTGAAATACTGCACAAGAGC  996

seq1  TGCAGTCTTCCTGTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTGTCTGAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCTTCCTGTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTGTCTGAT  1046

seq1  TTTTCAAGTGAATTC  1062
      |||||||||||||||
seq2  TTTTCAAGTGAATTC  1061