BAC Information

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BAC

Clone NameB6Ng01-326O21
Chromosome13 (Build37)
Map Location 44,355,765 - 44,496,956
singlet/doubletdoublet
Overlap geneEG637868
Upstream geneGfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432, A730030A06
Downstream geneEG667157, Jarid2, Dtnbp1, Hsp25-ps1, LOC100039502, LOC667204, LOC100039533, Mylip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326O21.bB6Ng01-326O21.g
ACCGA114610GA114611
length1,0551,120
definitionB6Ng01-326O21.b B6Ng01-326O21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,495,898 - 44,496,956)(44,355,765 - 44,356,877)
sequence
tgcaaacctcagtgcagtagaacttacctttccagcagatctgcctgagg
tcgcagacactagggcacacactgggtggctccatctgactgtgcaaatc
catgtgacactccttcttcaaggctcatggtatcagaaccagcggctcct
aggtcttccttgttcaccctctacatccttggttcctgagtctccaggaa
gaacagactgcctcctgcatgctttggagatatggcctcttaaccattac
catgttactcttgtgttttccactaaagctttctaaagcttccagaaatg
ctttctctcctcaaatctggctgtggctctttttttttcctggtcttttt
ttgattaaaggcctttgaagtcttctccccattttcaggaacagggatat
ataaccacatgtcccatacagggattcttcagggcctatctctgtgtgtc
agcacaatgtcccgcttatgtgtgtggtcggtggggtgtaactcatggct
ttgcaaatgctctatgtctccaccccctccccataccctcttttcttgat
cccccagtatgtttggatggtctgactgggatccgtactgtttggcctat
ggttcagggagtcgaggtatcgaattggctcaaggtgttgattgatcacg
gactgacaaaccccaggaggagctgtgggtaacaatgtgtatttatacag
gtatagaagggagatggatcatttgcgttttctgttcctaattcggcatt
cctctctttccttcttgttctttttttttgttttttgaatggaatgatgt
cacccactcactggttttatatagctctcgctgaagtagaactcaacgga
aattgtgcctattaattagaaacccagaatgtgggcagttttgaactgct
aattaaaacttaccgattgagttgtattcgtagggttgaaccctttcttt
cttttcctgaccctagacttgctaccagagaagttgggcttcttttaaaa
aagcatctccctttaaatggttccatttattcttccagaaacctcagtca
ttttt
gaattctaattatctcctagaggctctccgtccaaacaccattaacatat
aaacttggggcttaaattcctaataaaaacagagacatttccaggccata
gcaggaggtatcacctcgaacccattggctccttaagaatttgtaatgtt
tctgctataaacaaaactccatgcctgctgtacaacacagaaggaaaatg
gttgctgggaatgagacctgcaagtgctgagttgatgtgtctctgttctt
gtcacatcacttcacctccaaacagaatccagttcctctggcctctcaat
atgcagctggcatcgcatgcaaacctggctgcctctctcctgatcaccaa
gctctgctggactaaaccaccattcagagcctcatgtgagctgagttcac
cgtcccatggggagttgctaggcatcccgcctgacctcactggagccatc
ttgagccattaaatctgtccctattaagccctggccagctttccttacat
gactctacagccatcaccacaaagagcgtagctggtgtcctctatactac
gtgggacaagccaggtatgtcctgacttggataacatcccctttgtcctg
acagtaggaaagcctttccttctgagtcagaggaaccagctgctcttgct
tccatccagccccacacacttctgtcctaagtccccttcattacatcctg
tctgcttcccttcagtctctggctccttggatccagttctcatggcctgg
ggccagggaagaggtgggtcattttattaattttgctgctgccagaagtc
ccggctttgaggagagttttgttttttttttttaagtcccggggatacac
aaggcagccctcctgtctctcagcttcccggcattcactgaactgcaggc
cttcatgaaagaacatctaatgtgtccatttccagatgtgccgtgagtcc
cctttgcagaaaccagactcacaaggactccagcataaattaggtcctaa
tcacattaggagatggagtggggaagatctggagcagcactaaccagagg
gttggggggatgaggaacaagtagattgtaggagaattgaaagaacacga
tctctcttagatgatactgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44495898_44496956
seq2: B6Ng01-326O21.b_57_1111 (reverse)

seq1  AAAAATGGACCTGAGGTTTTCCTGGA--GATAAATGGAACCATTTTAAAG  48
      |||||||   |||||||||  |||||   ||||||||||||| |||||||
seq2  AAAAATG--ACTGAGGTTT--CTGGAAGAATAAATGGAACCA-TTTAAAG  45

seq1  GGAGATGCTTTTTT-AAAGAAG-CCAACTTCTCTGGTAGCAAAGTTCTAG  96
      |||||||||||||| ||||||| |||||||||||||||||||   |||||
seq2  GGAGATGCTTTTTTAAAAGAAGCCCAACTTCTCTGGTAGCAA--GTCTAG  93

seq1  GTTCAGGAAAAGAAAGAAAAGGGTTCAAACCCTACGAATACAACTCAATC  146
      | |||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  GGTCAGGAAAAGAAAG-AAAGGGTTC-AACCCTACGAATACAACTCAATC  141

seq1  GGTAAGTTTTAATTAGCAGTTCAAAACTGCCCACATTCTGGGTTTCTAAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTTTTAATTAGCAGTTCAAAACTGCCCACATTCTGGGTTTCTAAT  191

seq1  TAATAGGCACAATTTCCGTTGAGTTCTACTTCAGCGAGAGCTATATAAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGCACAATTTCCGTTGAGTTCTACTTCAGCGAGAGCTATATAAAA  241

seq1  CCAGTGAGTGGGTGACATCATTCCATTCAAAAAAC-AAAAAAAAGAACAA  295
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAGTGAGTGGGTGACATCATTCCATTCAAAAAACAAAAAAAAAGAACAA  291

seq1  GAAGGAAAGAGAGGAATGCCGAATTAGGAACAGAAAACGCAAATGATCCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAAGAGAGGAATGCCGAATTAGGAACAGAAAACGCAAATGATCCA  341

seq1  TCTCCCTTCTATACCTGTATAAATACACATTGTTACCCACAGCTCCTCCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTCTATACCTGTATAAATACACATTGTTACCCACAGCTCCTCCT  391

seq1  GGGGTTTGTCAGTCCGTGATCAATCAACACCTTGAGCCAATTCGATACCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTTGTCAGTCCGTGATCAATCAACACCTTGAGCCAATTCGATACCT  441

seq1  CGACTCCCTGAACCATAGGCCAAACAGTACGGATCCCAGTCAGACCATCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTCCCTGAACCATAGGCCAAACAGTACGGATCCCAGTCAGACCATCC  491

seq1  AAACATACTGGGGGATCAAGAAAAGAGGGTATGGGGAGGGGGTGGAGACA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACTGGGGGATCAAGAAAAGAGGGTATGGGGAGGGGGTGGAGACA  541

seq1  TAGAGCATTTGCAAAGCCATGAGTTACACCCCACCGACCACACACATAAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCATTTGCAAAGCCATGAGTTACACCCCACCGACCACACACATAAG  591

seq1  CGGGACATTGTGCTGACACACAGAGATAGGCCCTGAAGAATCCCTGTATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGACATTGTGCTGACACACAGAGATAGGCCCTGAAGAATCCCTGTATG  641

seq1  GGACATGTGGTTATATATCCCTGTTCCTGAAAATGGGGAGAAGACTTCAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGTGGTTATATATCCCTGTTCCTGAAAATGGGGAGAAGACTTCAA  691

seq1  AGGCCTTTAATCAAAAAAAGACCAGGAAAAAAAAAGAGCCACAGCCAGAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTTAATCAAAAAAAGACCAGGAAAAAAAAAGAGCCACAGCCAGAT  741

seq1  TTGAGGAGAGAAAGCATTTCTGGAAGCTTTAGAAAGCTTTAGTGGAAAAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGAGAAAGCATTTCTGGAAGCTTTAGAAAGCTTTAGTGGAAAAC  791

seq1  ACAAGAGTAACATGGTAATGGTTAAGAGGCCATATCTCCAAAGCATGCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTAACATGGTAATGGTTAAGAGGCCATATCTCCAAAGCATGCAG  841

seq1  GAGGCAGTCTGTTCTTCCTGGAGACTCAGGAACCAAGGATGTAGAGGGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTCTGTTCTTCCTGGAGACTCAGGAACCAAGGATGTAGAGGGTG  891

seq1  AACAAGGAAGACCTAGGAGCCGCTGGTTCTGATACCATGAGCCTTGAAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGAAGACCTAGGAGCCGCTGGTTCTGATACCATGAGCCTTGAAGA  941

seq1  AGGAGTGTCACATGGATTTGCACAGTCAGATGGAGCCACCCAGTGTGTGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGTCACATGGATTTGCACAGTCAGATGGAGCCACCCAGTGTGTGC  991

seq1  CCTAGTGTCTGCGACCTCAGGCAGATCTGCTGGAAAGGTAAGTTCTACTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGTCTGCGACCTCAGGCAGATCTGCTGGAAAGGTAAGTTCTACTG  1041

seq1  CACTGAGGTTTGCA  1059
      ||||||||||||||
seq2  CACTGAGGTTTGCA  1055

seq1: chr13_44355765_44356877
seq2: B6Ng01-326O21.g_67_1186

seq1  GAATTCTAATTATCTCCTAGAGGCTCTCCGTCCAAACACCATTAACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTATCTCCTAGAGGCTCTCCGTCCAAACACCATTAACATAT  50

seq1  AAACTTGGGGCTTAAATTCCTAATAAAAACAGAGACATTTCCAGGCCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGGGCTTAAATTCCTAATAAAAACAGAGACATTTCCAGGCCATA  100

seq1  GCAGGAGGTATCACCTCGAACCCATTGGCTCCTTAAGAATTTGTAATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGTATCACCTCGAACCCATTGGCTCCTTAAGAATTTGTAATGTT  150

seq1  TCTGCTATAAACAAAACTCCATGCCTGCTGTACAACACAGAAGGAAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTATAAACAAAACTCCATGCCTGCTGTACAACACAGAAGGAAAATG  200

seq1  GTTGCTGGGAATGAGACCTGCAAGTGCTGAGTTGATGTGTCTCTGTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGGGAATGAGACCTGCAAGTGCTGAGTTGATGTGTCTCTGTTCTT  250

seq1  GTCACATCACTTCACCTCCAAACAGAATCCAGTTCCTCTGGCCTCTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATCACTTCACCTCCAAACAGAATCCAGTTCCTCTGGCCTCTCAAT  300

seq1  ATGCAGCTGGCATCGCATGCAAACCTGGCTGCCTCTCTCCTGATCACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCTGGCATCGCATGCAAACCTGGCTGCCTCTCTCCTGATCACCAA  350

seq1  GCTCTGCTGGACTAAACCACCATTCAGAGCCTCATGTGAGCTGAGTTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTGGACTAAACCACCATTCAGAGCCTCATGTGAGCTGAGTTCAC  400

seq1  CGTCCCATGGGGAGTTGCTAGGCATCCCGCCTGACCTCACTGGAGCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCATGGGGAGTTGCTAGGCATCCCGCCTGACCTCACTGGAGCCATC  450

seq1  TTGAGCCATTAAATCTGTCCCTATTAAGCCCTGGCCAGCTTTCCTTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCATTAAATCTGTCCCTATTAAGCCCTGGCCAGCTTTCCTTACAT  500

seq1  GACTCTACAGCCATCACCACAAAGAGCGTAGCTGGTGTCCTCTATACTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTACAGCCATCACCACAAAGAGCGTAGCTGGTGTCCTCTATACTAC  550

seq1  GTGGGACAAGCCAGGTATGTCCTGACTTGGATAACATCCCCTTTGTCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACAAGCCAGGTATGTCCTGACTTGGATAACATCCCCTTTGTCCTG  600

seq1  ACAGTAGGAAAGCCTTTCCTTCTGAGTCAGAGGAACCAGCTGCTCTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGAAAGCCTTTCCTTCTGAGTCAGAGGAACCAGCTGCTCTTGCT  650

seq1  TCCATCCAGCCCCACACACTTCTGTCCTAAGTCCCCTTCATTACATCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCAGCCCCACACACTTCTGTCCTAAGTCCCCTTCATTACATCCTG  700

seq1  TCTGCTTCCCTTCAGTCTCTGGCTCCTTGGATCCAGTTCTCATGGCCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCCTTCAGTCTCTGGCTCCTTGGATCCAGTTCTCATGGCCTGG  750

seq1  GGCCAGGGAAGAGGTGGGTCATTTTATTAATTTTGCTGCTGCCAGAAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGGAAGAGGTGGGTCATTTTATTAATTTTGCTGCTGCCAGAAGTC  800

seq1  CCGGCTTTGAGGAGAGTTTTG-TTTTTTTTTTTAAGTCCCGGGGATACAC  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCGGCTTTGAGGAGAGTTTTGTTTTTTTTTTTTAAGTCCCGGGGATACAC  850

seq1  AAGGCAG-CCTCCTGTCTCTCAGCTTCCCGGCATTCACTGAACTGCAGGC  898
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCCCTCCTGTCTCTCAGCTTCCCGGCATTCACTGAACTGCAGGC  900

seq1  CTTCATGAAAGAACATCTAATGTGTCCATTTCCAGATGTGCCGTGAGTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGAAAGAACATCTAATGTGTCCATTTCCAGATGTGCCGTGAGTCC  950

seq1  CCTTTGCAGAAACCAGACTCACAAGGACTCCAGCATAAATTAGGTCCTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCAGAAACCAGACTCACAAGGACTCCAGCATAAATTAGGTCCTAA  1000

seq1  TCACCATTAGGAGAT-GAGT-GGGAAGATCT-GAGCAGCACTAACCAGAG  1045
      ||| ||||||||||| |||| |||||||||| ||||||||||||||||||
seq2  TCA-CATTAGGAGATGGAGTGGGGAAGATCTGGAGCAGCACTAACCAGAG  1049

seq1  GGGT-GGGGGATGAGGAACAAAGGAAGATTG-AGGAG-ATGGAAGGAACA  1092
      || | ||||||||||||||||  | |||||| ||||| || ||| |||||
seq2  GGTTGGGGGGATGAGGAACAA--GTAGATTGTAGGAGAATTGAAAGAACA  1097

seq1  -GATC-CTCTTAGATGATACTGT  1113
       |||| |||||||||||||||||
seq2  CGATCTCTCTTAGATGATACTGT  1120