BAC Information

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BAC

Clone NameB6Ng01-327J15
Chromosome13 (Build37)
Map Location 44,496,927 - 44,497,881
singlet/doubletsinglet
Overlap genenone
Upstream geneNol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432, A730030A06, EG637868
Downstream geneEG667157, Jarid2, Dtnbp1, Hsp25-ps1, LOC100039502, LOC667204, LOC100039533, Mylip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327J15.bB6Ng01-327J15.g
ACCGA115105GA115106
length1,190957
definitionB6Ng01-327J15.b B6Ng01-327J15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctttaatagggacggggtttcgttttctcgctctctcttgctt
cttgcactctggctcctgaagatgtaagcaataaagctttgccgcagaag
attctggtctgtggtgttcttcctggccggtcgtgagaacgcgtctaata
acaattggtgccgaattccgggacgagaaaaaaaactcgggactggcgca
agaaagatccctcattccagaaccagaactgcgggtcgcggtaataaagg
ttcccgtaaagcagactgttaagaaggattcaactgtatgaattcagaac
ttttcagctggggaacgagagtaccagtgagtatagctttacgaggtaag
cctggccttgaactttctaaggaaattcaagacagtctatcagaagtaaa
gtggaaaatgtttggccttgaattttttctagtgttagaagcccttttgt
tccttttcacatgttatcaagtggttaaggcagggaggattctagaggaa
attcaggacaagctatcagaagtaaagtggggagagagagtaggaacaaa
gagaaaatatggtacacaaaataagtatacaggcctttccaagggtcttg
aacccgaggaaaagttaaggttaggtaggaatacctggagagagattaga
agaaaaagaggaaaaagggaaaagaagaaagatcaattagtggaggtctc
taggaaaaggagcctgtgctcatcgctggatgggctcggggagccagctc
ttggtagctctgaatcagatgatgaattctcctctgaagaaacagactgg
gaggaagaagcagctcattatgagaaaaaagggtaccagccaggtaaagt
gctagctaatcagttaaggaagccaaaagcggctggcgaaggccagtttg
ctgattggcctcaggcagtcggtttcaaggtccgccctatgcggagtccc
cgccctgcgtagtgcgtcagcattgcacagagaggcagtgcgcagagagg
cagtgcgcagactcattcattccagagaggaacaaggaaaatacatcagc
atttcagtcttgagagcgagggtgggcgtgtcacgcctcggtagaatact
tacaaataaggaaatttgcgagtgtcggtaaatccggaacaagtctatta
cttggtcagttggaacaagctcgctcggacgcattgctac
gaattcctcaccatcctgactagaaccatttacttcaggttgaggtctta
cagacaattttctgaattgtttcatggacattgtttattcaatccattct
ctagacaaataataaaatgagactataggatagatttattcacaggcagg
tcatgtgggagaccaggttgatcatgaaagttcttttgtttaagctataa
ccatagaaccttgatttttttgttgttgttgtttgttttttggcaggcag
gaagacttaaacttaacctgaacattccagtgcgtgccacatagaaatgg
tttcactggatccagggtagactgacgtgatgatggcttagaaagggtgg
tttggcttctcaggggagccagggccttaagaaaatcatctgatgggaag
aagagagcaaggtgatctctctattggtcttccaggatgtgttgtccaca
gattcacagataaacatctgatatgaccgcaattgggtattggaagaagg
ttggttgtctagattggccaactgggcacgtgctaagcctctcatggtgt
gttctaaaaggtttctttttaaatgcctcttcttctttaaggggtccctt
gaggtttccccaagagaatgacagctctatggggcgtgtgtatatgagaa
aggaggcatgcatgtttccgtcaacctggatgtgttcccggagtctgctt
tatcttgtccttaccccatcagtgtctagccttctactcatgtgctgctt
tctgtgacatcttctgatttgacatcaggtttctgtcaatcatgggaatg
ttctgataagaggggatctggaccctaatgttgctgagggggatgggcat
tgcatgcatgggatgggtatgtaagtatgtgcatgcatgtacatatgagt
ctccagcgggtggcgggggtaattcgtgctaactctcagtgcatgagaac
ttacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44496927_44497881
seq2: B6Ng01-327J15.g_68_1024 (reverse)

seq1  AAGGTAAGTTCTACTGCACTGAG-GTTTGCACGAATT-CCCCCGCCACCC  48
      ||||||||||||  ||||||||| ||| ||||||||| ||||||||||||
seq2  AAGGTAAGTTCTCATGCACTGAGAGTTAGCACGAATTACCCCCGCCACCC  50

seq1  GCCGGAGTCTCATGTGTACATGCATGCACATACTTACATACCCATCCCAT  98
      || |||| ||||| ||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGACTCATATGTACATGCATGCACATACTTACATACCCATCCCAT  100

seq1  GCATGCAATGCCCATCCCCCTCAGCAACATTAGGGTCCAGATCCCCTCTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAATGCCCATCCCCCTCAGCAACATTAGGGTCCAGATCCCCTCTT  150

seq1  ATCAGAACATTCCCATGATTGACAGAAACCTGATGTCAAATCAGAAGATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAACATTCCCATGATTGACAGAAACCTGATGTCAAATCAGAAGATG  200

seq1  TCACAGAAAGCAGCACATGAGTAGAAGGCTAGACACTGATGGGGTAAGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAAGCAGCACATGAGTAGAAGGCTAGACACTGATGGGGTAAGGA  250

seq1  CAAGATAAAGCAGACTCCGGGAACACATCCAGGTTGACGGAAACATGCAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATAAAGCAGACTCCGGGAACACATCCAGGTTGACGGAAACATGCAT  300

seq1  GCCTCCTTTCTCATATACACACGCCCCATAGAGCTGTCATTCTCTTGGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTTCTCATATACACACGCCCCATAGAGCTGTCATTCTCTTGGGG  350

seq1  AAACCTCAAGGGACCCCTTAAAGAAGAAGAGGCATTTAAAAAGAAACCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCAAGGGACCCCTTAAAGAAGAAGAGGCATTTAAAAAGAAACCTT  400

seq1  TTAGAACACACCATGAGAGGCTTAGCACGTGCCCAGTTGGCCAATCTAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACACACCATGAGAGGCTTAGCACGTGCCCAGTTGGCCAATCTAGA  450

seq1  CAACCAACCTTCTTCCAATACCCAATTGCGGTCATATCAGATGTTTATCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAACCTTCTTCCAATACCCAATTGCGGTCATATCAGATGTTTATCT  500

seq1  GTGAATCTGTGGACAACACATCCTGGAAGACCAATAGAGAGATCACCTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATCTGTGGACAACACATCCTGGAAGACCAATAGAGAGATCACCTTG  550

seq1  CTCTCTTCTTCCCATCAGATGATTTTCTTAAGGCCCTGGCTCCCCTGAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCTTCCCATCAGATGATTTTCTTAAGGCCCTGGCTCCCCTGAGA  600

seq1  AGCCAAACCACCCTTTCTAAGCCATCATCACGTCAGTCTACCCTGGATCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAACCACCCTTTCTAAGCCATCATCACGTCAGTCTACCCTGGATCC  650

seq1  AGTGAAACCATTTCTATGTGGCACGCACTGGAATGTTCAGGTTAAGTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAACCATTTCTATGTGGCACGCACTGGAATGTTCAGGTTAAGTTTA  700

seq1  AGTCTTCCTGCCTGCCAAAAAACAAACAACAACAACAAAAAAATCAAGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCTGCCTGCCAAAAAACAAACAACAACAACAAAAAAATCAAGGT  750

seq1  TCTATGGTTATAGCTTAAACAAAAGAACTTTCATGATCAACCTGGTCTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGTTATAGCTTAAACAAAAGAACTTTCATGATCAACCTGGTCTCC  800

seq1  CACATGACCTGCCTGTGAATAAATCTATCCTATAGTCTCATTTTATTATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGACCTGCCTGTGAATAAATCTATCCTATAGTCTCATTTTATTATT  850

seq1  TGTCTAGAGAATGGATTGAATAAACAATGTCCATGAAACAATTCAGAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGAGAATGGATTGAATAAACAATGTCCATGAAACAATTCAGAAAA  900

seq1  TTGTCTGTAAGACCTCAACCTGAAGTAAATGGTTCTAGTCAGGATGGTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTAAGACCTCAACCTGAAGTAAATGGTTCTAGTCAGGATGGTGA  950

seq1  GGAATTC  955
      |||||||
seq2  GGAATTC  957