BAC Information

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BAC

Clone NameB6Ng01-328D24
Chromosome13 (Build37)11 (Build37)
Map Location 83,353,198 - 83,353,24183,497,760 - 83,498,750
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC238756, LOC667018
Downstream geneMef2c, LOC100043111, LOC623241, LOC432789, 2810049E08Rik, LOC100043119, LOC667081, LOC667101
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328D24.bB6Ng01-328D24.g
ACCGA115567GA115568
length4471,008
definitionB6Ng01-328D24.b B6Ng01-328D24.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(83,353,198 - 83,353,241)(83,497,760 - 83,498,750)
sequence
aaaaatttgcacaaagctgaataggaccacacagaatataatatacattc
ctgtgcatgcacacatactccctgaatatcagctagccgcctcaatcact
caagagctatatgccacacctgtgcccatcaggaatcataattccttctg
actgcagacaatcctctgtcctccatgtcacaataatgacccgtgacctc
ccaacacctacttccttaggcaaacttcaggaccctatcaggcccaactg
ccacgtttactgttggatagcattcatgcttttagccaccgagcagctgc
agactctgctaaatgtttggatggaaagttttcttttttagttacatgtc
accgatggtgcaattttctccaacagccctgtgactattcttatgcaact
taggtacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

gaattcaagagctttcagaagttctgagaagcagagaaacagagaaatat
aagtagaatcttgatagatgagaggatgtaccagggtttagggggagaag
ctggagaaactgtggtggctgcaagtgaggtcacttcatgtcactgtctt
gaaagcaaagatgcagagttgagtttaatggcagaagcaatgagcaggat
cagtcctgatagaaggaactggaggtcagatggatggcaggtccagatag
gtgaacaagagaaaaggcagacatgggaactacataggagacacaggtca
tcacataacaaggtcagccatgagaggcacaggagcagtgctgtgataga
gacagacatgggacacttaccattggcagatgaagtggggggatgaagaa
acataacagatgctaaatgtttcctggcgagattctcctctgaacaggaa
gggtttgccttttcatcactgagcctttcatcagcatcctgcacactcca
gcaatgacgagagaaccaacagtcaaaactgaacaggcttgtagcccacc
cagctaaggccaggggaaggctgaagcccctcagaaataccagtgctgac
ttttaaggctaggaacagtcctgaaattcctaaagttacttcatttaggc
tctaactgtaggcagagtggaatttgtacttctaatctatgcttttctaa
gatattaaatttaggatgtgtgcattattttagaagggtatatgtgcact
gaatgcaggagtctgaggaggtgagaattgtcagatcccctctggagatg
gagttatatgaaagtttttgagcaacctgatacagatggtgggacactgg
agcttcaggtttttcaggaagataattatgttcctattaagctactgaaa
ctaagcttccacagtcttcaaattatgcctaagaaagaacccaatacaac
aaaggttcatgttgtccttcgagaagtacatatccaatgtttctaattgc
ctgtatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_83353198_83353241
seq2: B6Ng01-328D24.b_453_496 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACAGGTAC  44
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACAGGTAC  44


seq1: chr11_83497760_83498750
seq2: B6Ng01-328D24.g_67_1074

seq1  GAATTCAAGAGCTTTCAGAAGTTCTGAGAAGCAGAGAAACAGAGAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGCTTTCAGAAGTTCTGAGAAGCAGAGAAACAGAGAAATAT  50

seq1  AAGTAGAATCTTGATAGATGAGAGGATGTACCAGGGTTTAGGGGGAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAATCTTGATAGATGAGAGGATGTACCAGGGTTTAGGGGGAGAAG  100

seq1  CTGGAGAAACTGTGGTGGCTGCAAGTGAGGTCACTTCATGTCACTGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAAACTGTGGTGGCTGCAAGTGAGGTCACTTCATGTCACTGTCTT  150

seq1  GAAAGCAAAGATGCAGAGTTGAGTTTAATGGCAGAAGCAATGAGCAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAAGATGCAGAGTTGAGTTTAATGGCAGAAGCAATGAGCAGGAT  200

seq1  CAGTCCTGATAGAAGGAACTGGAGGTCAGATGGATGGCAGGTCCAGATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGATAGAAGGAACTGGAGGTCAGATGGATGGCAGGTCCAGATAG  250

seq1  GTGAACAAGAGAAAAGGCAGACATGGGAACTACATAGGAGACACAGGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAAGAGAAAAGGCAGACATGGGAACTACATAGGAGACACAGGTCA  300

seq1  TCACATAACAAGGTCAGCCATGAGAGGCACAGGAGCAGTGCTGTGATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAACAAGGTCAGCCATGAGAGGCACAGGAGCAGTGCTGTGATAGA  350

seq1  GACAGACATGGGACACTTACCATTGGCAGATGAAGTGGGGGGATGAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACATGGGACACTTACCATTGGCAGATGAAGTGGGGGGATGAAGAA  400

seq1  ACATAACAGATGCTAAATGTTTCCTGGCGAGATTCTCCTCTGAACAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACAGATGCTAAATGTTTCCTGGCGAGATTCTCCTCTGAACAGGAA  450

seq1  GGGTTTGCCTTTTCATCACTGAGCCTTTCATCAGCATCCTGCACACTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGCCTTTTCATCACTGAGCCTTTCATCAGCATCCTGCACACTCCA  500

seq1  GCAATGACGAGAGAACCAACAGTCAAAACTGAACAGGCTTGTAGCCCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACGAGAGAACCAACAGTCAAAACTGAACAGGCTTGTAGCCCACC  550

seq1  CAGCTAAGGCCAGGGGAAGGCTGAAGCCCCTCAGAAATACCAGTGCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAGGCCAGGGGAAGGCTGAAGCCCCTCAGAAATACCAGTGCTGAC  600

seq1  TTTTAAGGATAGGAACAGTCCTGAAATTCCTAAAGTTACTTCATTTAGGC  650
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGCTAGGAACAGTCCTGAAATTCCTAAAGTTACTTCATTTAGGC  650

seq1  TCTAACTGTAGGCAGAGTGGAATTTGTACTTCTAATCTATGCTTTTCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTGTAGGCAGAGTGGAATTTGTACTTCTAATCTATGCTTTTCTAA  700

seq1  GATATTAAATTTAGGATGTGTGCATTATTTTAGAAGGGTATATGTGCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAAATTTAGGATGTGTGCATTATTTTAGAAGGGTATATGTGCACT  750

seq1  GAATGCAGGAGTCTGAGGAGGTGAGAATTGTCAGAT-CCCTCTGGAGATG  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAATGCAGGAGTCTGAGGAGGTGAGAATTGTCAGATCCCCTCTGGAGATG  800

seq1  GAGTTATATGAA--GTTTTGAGCAACCTGATACAGATGGT-GGACACT-G  845
      ||||||||||||   ||||||||||||||||||||||||| ||||||| |
seq2  GAGTTATATGAAAGTTTTTGAGCAACCTGATACAGATGGTGGGACACTGG  850

seq1  AGC-TCAGG-TTTTCAGGAAGAGTATTATG-TCCTATT-AGCTACTG-AA  890
      ||| ||||| ||||||||||||  |||||| ||||||| |||||||| ||
seq2  AGCTTCAGGTTTTTCAGGAAGATAATTATGTTCCTATTAAGCTACTGAAA  900

seq1  CT-AGC-TCCACAGTCTTCAAATAATG-CTAAG-AAGAACCC-ATACAAC  935
      || ||| |||||||||||||||| ||| ||||| |||||||| |||||||
seq2  CTAAGCTTCCACAGTCTTCAAATTATGCCTAAGAAAGAACCCAATACAAC  950

seq1  AAAGGTTCATGTTGTCCTTCTAGAGTTACATATCCAATG-TTCT-ATTGC  983
      |||||||||||||||||||| |||  ||||||||||||| |||| |||||
seq2  AAAGGTTCATGTTGTCCTTCGAGAAGTACATATCCAATGTTTCTAATTGC  1000

seq1  CTGTATAT  991
      ||||||||
seq2  CTGTATAT  1008


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