BAC Information

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BAC

Clone NameB6Ng01-329A14
Chromosome14 (Build37)13 (Build37)
Map Location 35,514,364 - 35,514,49967,618,551 - 67,619,675
singlet/doubletsingletsinglet
Overlap geneWapal
Upstream geneGdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a, 9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik
Downstream geneLOC100041341, Grid1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329A14.bB6Ng01-329A14.g
ACCGA116128GA116129
length5101,130
definitionB6Ng01-329A14.b B6Ng01-329A14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(35,514,364 - 35,514,499)(67,618,551 - 67,619,675)
sequence
gaattctctgcttagctctgtacccattttttaactgggttattgggttt
gctgctgtccaacttcttgagttttttaatataattgcatatcagcccac
tgtgagattttgggttgctgaaaatcttcccattctggaggctgtcaata
tgacagtgtcctttgctttacagaaggtttccagttgcatgagatcccac
tcattaattgtttattttagtgccttagttattagtgttctgttcagtaa
gttgttcctataccaatgcattcaaggctactccccacttcctcttctat
tagacttagagtatttgttggtttggttttttacagttttattttgtatt
tatatgagtgcactgcagctctcttcagacacacattagaaaagtgcatc
agatcccattacagatcgttgtgagccactatgtggttgctgggatttga
agtcagaacgtctggaagagcagtcagagcacttaactgctgagccatct
ctccaacctg
gaattctttgatgctgctttagggttgagggataggaaaaggctttccca
cattcttcacacctgtaaggattctctgcagaatgaattctttgatgttg
cttaaggaatgaaggtaaataaaaggctttgccacactcctcacacttgc
agagattctctgcagaatgagttcgttgatgttgcttaagcaatgaaggg
aaataaaaggctttggcacactcctcacacttgtagggtttgtctccaga
gtggattttcttgtgtatataaagtgctgagcgagtactgaaggccttgc
cacactcttcacacttgtagggtttctctccggtgtggattcgctggtga
atagaaagtgccgagtgagcactaaagaccttcccacattcttcacattt
gtagggcttctccacaggatgaactctctggcgctgaagaaggagtgagt
tccaatcaaaggtcttgtcaaattcttgacatttatagggcttcccccct
ggtgaggaaaagctgagatatgaatgagctccaagcgacattcttcatgt
ttacaatgcttatctttaatatgaggagttactcatatttttatagacaa
atgggaaactacaatatatttccatacctatactaactgtagtgaaattc
agaaaatactgtagatcgaaataacataaacttctactgaaaggtgaaga
caaaagtagaatatagaaacactgaagccatatccaaagttaaatggcta
agagatcaataataccatcaaaaataacagaaactcttatgctaacagaa
ataagcccactagacaaactgtctgatcatcagacatagataaaaagtaa
aatatatctaaattgggtacttttctgttgctgtggtaaaatatcatgac
taaagcaatttacagaagaaagacttaagttaggcttatgggttcccaaa
cgttctgaatccatcatggaggatcgaatgaaagctatgagcaggagtga
tggctagaagcagagctgaggcttcgttttgtgaatgcaatcgtgaagca
gagaatcaaaacaaaacagtgcagcaggatttggactctgaagctgtacc
tcaggttgtggtgtgctgcctgcagcaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35514364_35514499
seq2: B6Ng01-329A14.b_417_554 (reverse)

seq1  CAGGCTGGAGAGATGGCTCAGTAGTTAAGAGCACTGACTGCTCTTCCAGA  50
      |||| |||||||||||||||| ||||||| || |||||||||||||||||
seq2  CAGGTTGGAGAGATGGCTCAGCAGTTAAGTGCTCTGACTGCTCTTCCAGA  50

seq1  GGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT  100
       || |||| ||||||||||||||||||||| |||||||||||| ||||||
seq2  CGTTCTGACTTCAAATCCCAGCAACCACATAGTGGCTCACAACGATCTGT  100

seq1  AATGGGATCTGATGCCCTCTTCT--GGTGTGTCTGAAG  136
      ||||||||||||||| || ||||   ||||||||||||
seq2  AATGGGATCTGATGCACTTTTCTAATGTGTGTCTGAAG  138

seq1: chr13_67618551_67619675
seq2: B6Ng01-329A14.g_68_1197

seq1  GAATTCTTTGATGCTGCTTTAGGGTTGAGGGATAGGAAAAGGCTTTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATGCTGCTTTAGGGTTGAGGGATAGGAAAAGGCTTTCCCA  50

seq1  CATTCTTCACACCTGTAAGGATTCTCTGCAGAATGAATTCTTTGATGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCACACCTGTAAGGATTCTCTGCAGAATGAATTCTTTGATGTTG  100

seq1  CTTAAGGAATGAAGGTAAATAAAAGGCTTTGCCACACTCCTCACACTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGAATGAAGGTAAATAAAAGGCTTTGCCACACTCCTCACACTTGC  150

seq1  AGAGATTCTCTGCAGAATGAGTTCGTTGATGTTGCTTAAGCAATGAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTCTCTGCAGAATGAGTTCGTTGATGTTGCTTAAGCAATGAAGGG  200

seq1  AAATAAAAGGCTTTGGCACACTCCTCACACTTGTAGGGTTTGTCTCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAGGCTTTGGCACACTCCTCACACTTGTAGGGTTTGTCTCCAGA  250

seq1  GTGGATTTTCTTGTGTATATAAAGTGCTGAGCGAGTACTGAAGGCCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTTTCTTGTGTATATAAAGTGCTGAGCGAGTACTGAAGGCCTTGC  300

seq1  CACACTCTTCACACTTGTAGGGTTTCTCTCCGGTGTGGATTCGCTGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCTTCACACTTGTAGGGTTTCTCTCCGGTGTGGATTCGCTGGTGA  350

seq1  ATAGAAAGTGCCGAGTGAGCACTAAAGACCTTCCCACATTCTTCACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGTGCCGAGTGAGCACTAAAGACCTTCCCACATTCTTCACATTT  400

seq1  GTAGGGCTTCTCCACAGGATGAACTCTCTGGCGCTGAAGAAGGAGTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGCTTCTCCACAGGATGAACTCTCTGGCGCTGAAGAAGGAGTGAGT  450

seq1  TCCAATCAAAGGTCTTGTCAAATTCTTGACATTTATAGGGCTTCCCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCAAAGGTCTTGTCAAATTCTTGACATTTATAGGGCTTCCCCCCT  500

seq1  GGTGAGGAAAAGCTGAGATATGAATGAGCTCCAAGCGACATTCTTCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGAAAAGCTGAGATATGAATGAGCTCCAAGCGACATTCTTCATGT  550

seq1  TTACAATGCTTATCTTTAATATGAGGAGTTACTCATATTTTTATAGACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATGCTTATCTTTAATATGAGGAGTTACTCATATTTTTATAGACAA  600

seq1  ATGGGAAACTACAATATATTTCCATACCTATACTAACTGTAGTGAAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAACTACAATATATTTCCATACCTATACTAACTGTAGTGAAATTC  650

seq1  AGAAAATACTGTAGATCGAAATAACATAAACTTCTACTGAAAGGTGAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATACTGTAGATCGAAATAACATAAACTTCTACTGAAAGGTGAAGA  700

seq1  CAAAAGTAGAATATAGAAACACTGAAGCCATATCCAAAGTTAAATGGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTAGAATATAGAAACACTGAAGCCATATCCAAAGTTAAATGGCTA  750

seq1  AGAGATCAATAATACCATCAAAAATAACAGAAACTCTTATGCTAACAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCAATAATACCATCAAAAATAACAGAAACTCTTATGCTAACAGAA  800

seq1  ATAAGCCCACTAGACAAACTGTCTGATCATCAGACATAGATAAAAAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCCACTAGACAAACTGTCTGATCATCAGACATAGATAAAAAGTAA  850

seq1  AATATATCTAAATTGGGTACTTTTCTGTTGCTGTGGTAAAATATCATGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATCTAAATTGGGTACTTTTCTGTTGCTGTGGTAAAATATCATGAC  900

seq1  TAAAGCAATTTACAGAAGAAAGACTTAAGTTAGGCTTAT-GGTTCCAAAA  949
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  TAAAGCAATTTACAGAAGAAAGACTTAAGTTAGGCTTATGGGTTCCCAAA  950

seq1  CGTTCTGAATCCATCATGGAGGACCGAATGAAAGCTATGAGCAGGAGTGA  999
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CGTTCTGAATCCATCATGGAGGATCGAATGAAAGCTATGAGCAGGAGTGA  1000

seq1  TGGCTAG-AGCAGAAGCTGAGGC-TCGTTTTGTGAATGCAAACCGTGAAG  1047
      ||||||| ||||| ||||||||| ||||||||||||||| || |||||||
seq2  TGGCTAGAAGCAG-AGCTGAGGCTTCGTTTTGTGAATGC-AATCGTGAAG  1048

seq1  CAGAGAACCAAA--CAAACAGTGCAGGCAGGATTTGAACTCTGAAAGCCT  1095
      ||||||| ||||   |||||||||| |||||||||| |||||| ||||  
seq2  CAGAGAATCAAAACAAAACAGTGCA-GCAGGATTTGGACTCTG-AAGCTG  1096

seq1  GACCCCA----GTTGTGTGCTGCCTGCAGCAAGG  1125
       ||| ||    || ||||||||||||||||||||
seq2  TACCTCAGGTTGTGGTGTGCTGCCTGCAGCAAGG  1130