BAC Information

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BAC

Clone NameB6Ng01-330F19
Chromosome13 (Build37)
Map Location 15,118,286 - 15,119,444
singlet/doubletsinglet
Overlap genenone
Upstream geneTbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1, Mrpl32, Psma2, AW209491, EG665099
Downstream geneLOC670994, EG625121, Gli3, LOC665157, Inhba
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330F19.bB6Ng01-330F19.g
ACCGA117059GA117060
length1,1641,198
definitionB6Ng01-330F19.b B6Ng01-330F19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaggcaactcagtattcaaaaatgctgtaggatgtaaggtcg
ccttatgaagggagaaagacatgtatggaataggttcgagaaaaaatgtg
aagattttatgtttggtgaatagaaagggagaaaatcaaagacaaatgga
gaagagtcaagatgtatcatgaggtgaccaggaaactgtagccattccaa
catctggagttacagtgttcctgtctgctttcaggcttgagagtgtagca
acaggctgggtgttggaaacacttctgctgctgacaacccagacataaaa
ttcacttctgaagaaacaaggagtggagtcttctttctgcaaactagtga
aaatgaggcctggtaggcagtatacttaatagcatgagtttttgaagcca
aatatattcaagtttgagtctcagttcaaccactgattatgtgtaagagg
cctttggcatcttgtgtctcatagactctagtgctggccagatgctttat
ggaaggaagcagtcaggataggtatgacgaaaatacattctatgcatgta
tggcaattttgagtaataaaagtatggttgatggaaggttgaaacatatt
tctagacaagaacacagtgccaataacatctttaggaatacagcgttaga
tacagctggaatcaggcccatggttggcttctggtaggtctctccaaacc
tgcttcccaccagacaaataaatctgtcccctcaaatacagttaactata
gatgctgctatttcccaggcactggcccgcctgctcagaagcagggatag
acattggcactcttccacaaaggcttctttgaggttgactgtagtggtat
tcactcagaaatatttttctgcctggaagattaactttcatcttgaaact
ccacttcctgatttgaaaggccacagaataaagctaagcaatcttccttc
taaagaagtccccttgcttagaatggacagtctttcatgacacaatgttg
ctgtaagccaactaggttatgtcaagttgatgtaacttcaaaggcacact
tacatacctccccagtgctctcctaatagctgatgcttttagtgactttt
gtaaaatacaaaggtctgaagcctataagaatcctgttcacattttcctc
ttgtgattaatttg
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaatatg
ttcaacatccttaatcatcaaggaaatgcaagtcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt
agatgctgtcgtggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaagcttgtacaaccactctggaaatctgtcggatggttcctca
gaaaattggacatagtactactggaggacctgcaatacctttcctgggca
tatatccagaagatgttccaactggtaagaaagacacatgctctactatg
ttcgtagcagccttatttataatagccagaagctggatttaacccagatg
tccctcaacagaagaatggattcagaaaatgtggtacatttacacaatgg
gagtattactagctattaaaaagaatgaatttatgaaatttctaggcaaa
tggatagaccaagagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcacatgatgtgtactcactgataagtggattttagctcagaaact
tagaatacccaagatataagatacagtttgcaaaacacatgaaactcaag
aagaatgaagagcaaagtgtggatactttgccccttcttacaattgggaa
caaaacacccatggaaggaattacagagataaagtttggagctgagataa
aaggatggaccatctaaagactgccatatccagggatccatcccataatc
agcccccaaaagctgacaccattgcatacacaagcaagattttgctgaaa
ggaccttgatatagctgtctcgtgtgagactatgtcaaggccctagcaaa
cacagaagtgaatgctcacagtcagctattggtggatcacaggaccccca
atgggacgagatagagaaagtacccaaggagctaagggatctgcaaccct
gtagtggacacataggaactaatcagtaccctgggagctcatgtctctag
ctgcattatgtatcagaagatgactagttcgccatagttgcaagagaggc
caatgctgtgcaaacattttatgcctcaggactgaacccagacaggaact
tggaagttgttggggattagacggatgtgtcgactaccacttgtacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_15118286_15119444
seq2: B6Ng01-330F19.b_49_1212

seq1  GAATTCCAAAGGCAACTCAGTATTCAAAAATGCTGTAGGATGTAAGGTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGCAACTCAGTATTCAAAAATGCTGTAGGATGTAAGGTCG  50

seq1  CCTTATGAAGGGAGAAAGACATGTATGGAATAGGTTCGAGAAAAAATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGAAGGGAGAAAGACATGTATGGAATAGGTTCGAGAAAAAATGTG  100

seq1  AAGATTTTATGTTTGGTGAATAGAAAGGGAGAAAATCAAAGACAAATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTATGTTTGGTGAATAGAAAGGGAGAAAATCAAAGACAAATGGA  150

seq1  GAAGAGTCAAGATGTATCATGAGGTGACCAGGAAACTGTAGCCATTCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTCAAGATGTATCATGAGGTGACCAGGAAACTGTAGCCATTCCAA  200

seq1  CATCTGGAGTTACAGTGTTCCTGTCTGCTTTCAGGCTTGAGAGTGTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGAGTTACAGTGTTCCTGTCTGCTTTCAGGCTTGAGAGTGTAGCA  250

seq1  ACAGGCTGGGTGTTGGAAACACTTCTGCTGCTGACAACCCAGACATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTGGGTGTTGGAAACACTTCTGCTGCTGACAACCCAGACATAAAA  300

seq1  TTCACTTCTGAAGAAACAAGGAGTGGAGTCTTCTTTCTGCAAACTAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCTGAAGAAACAAGGAGTGGAGTCTTCTTTCTGCAAACTAGTGA  350

seq1  AAATGAGGCCTGGTAGGCAGTATACTTAATAGCATGAGTTTTTGAAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGGCCTGGTAGGCAGTATACTTAATAGCATGAGTTTTTGAAGCCA  400

seq1  AATATATTCAAGTTTGAGTCTCAGTTCAACCACTGATTATGTGTAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTCAAGTTTGAGTCTCAGTTCAACCACTGATTATGTGTAAGAGG  450

seq1  CCTTTGGCATCTTGTGTCTCATAGACTCTAGTGCTGGCCAGATGCTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGCATCTTGTGTCTCATAGACTCTAGTGCTGGCCAGATGCTTTAT  500

seq1  GGAAGGAAGCAGTCAGGATAGGTATGACGAAAATACATTCTATGCATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGCAGTCAGGATAGGTATGACGAAAATACATTCTATGCATGTA  550

seq1  TGGCAATTTTGAGTAATAAAAGTATGGTTGATGGAAGGTTGAAACATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATTTTGAGTAATAAAAGTATGGTTGATGGAAGGTTGAAACATATT  600

seq1  TCTAGACAAGAACACAGTGCCAATAACATCTTTAGGAATACAGCGTTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACAAGAACACAGTGCCAATAACATCTTTAGGAATACAGCGTTAGA  650

seq1  TACAGCTGGAATCAGGCCCATGGTTGGCTTCTGGTAGGTCTCTCCAAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTGGAATCAGGCCCATGGTTGGCTTCTGGTAGGTCTCTCCAAACC  700

seq1  TGCTTCCCACCAGACAAATAAATCTGTCCCCTCAAATACAGTTAACTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCACCAGACAAATAAATCTGTCCCCTCAAATACAGTTAACTATA  750

seq1  GATGCTGCTATTTCCCAGGCACTGGCCCGCCTGCTCAGAAGCAGGGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCTATTTCCCAGGCACTGGCCCGCCTGCTCAGAAGCAGGGATAG  800

seq1  ACATTGGCACTCTTCCACAAAGGCTTCTTTGAGGTTGACTGTAGTGGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGCACTCTTCCACAAAGGCTTCTTTGAGGTTGACTGTAGTGGTAT  850

seq1  TCACTCAGAAATATTTTTCTGCCTGGAAGATTAACTTTCATCTTGAAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAGAAATATTTTTCTGCCTGGAAGATTAACTTTCATCTTGAAACT  900

seq1  CCACTTCCTGATTTG-AAGGCCACAGAATAAAGCTAAGCAATCTTCCTTC  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCACTTCCTGATTTGAAAGGCCACAGAATAAAGCTAAGCAATCTTCCTTC  950

seq1  TAAAAGAAGTCCCCTTGCTTAGAATGGACAGTCTTTCATGACACAATGTT  999
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-AAAGAAGTCCCCTTGCTTAGAATGGACAGTCTTTCATGACACAATGTT  999

seq1  GCTGTAAGCCAACTAGGGTTATGTCAAGTTGATGTAACTTCAAAGGCACA  1049
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCTGTAAGCCAACTA-GGTTATGTCAAGTTGATGTAACTTCAAAGGCACA  1048

seq1  CTTACATACCTCCCCAGTGCTCTCCT-ATAGCTGATGCTTTTAGTGACTT  1098
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTACATACCTCCCCAGTGCTCTCCTAATAGCTGATGCTTTTAGTGACTT  1098

seq1  TTGTAAAATACAAAGGTCCTGAAG-CTATA--GATCCTGTTCACATTT--  1143
      ||||||||||||||||| |||||| |||||   |||||||||||||||  
seq2  TTGTAAAATACAAAGGT-CTGAAGCCTATAAGAATCCTGTTCACATTTTC  1147

seq1  CTC-TGTGATTATTTTG  1159
      ||| |||||||| ||||
seq2  CTCTTGTGATTAATTTG  1164