BAC Information

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BAC

Clone NameB6Ng01-330M10
Chromosome13 (Build37)
Map Location 68,454,832 - 68,572,099
singlet/doubletdoublet
Overlap geneEG666272
Upstream geneE130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245
Downstream geneLOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205, LOC218332
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330M10.bB6Ng01-330M10.g
ACCGA117334GA117335
length8011,111
definitionB6Ng01-330M10.b B6Ng01-330M10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,571,305 - 68,572,099)(68,454,832 - 68,455,954)
sequence
gaattcctgataaagaacaatgtagtgggacttgggacatttctccaaga
aaaaaaattattttgcatggagaaaaacagttggcaataaatgctcaaat
gaagtgagtgagttaatttttcttctaagacaagccaccattcatatgtc
taaacggagacttcagatatgtgtgtagatctctccgttggaggccatag
gccagtgtgctgcacattctttttatgtgagctgcacttaatctgttttc
tccacaccagactcagcagtttaaggaggattgtgcaaaggaaggtactt
tttgaaccaggacagctgtttgcctgtgtggtaaccacagaaggggaggt
aggtggagatgaaagggccatttccagtcagaaatgtagctcagataagt
gtacagtagcagaatggttaggtgaatagagcagaagattccaacttcag
actcagctggttgttggcactcaggccctaagggcatctttgtcacttca
tatctgaacttaataaacaggaatggaagatataagtagcacacactgat
gtttgtactgataaataatctgtgcatatgtctaactaatgcacacatgc
atggatagatagatagatagatagatagatagatagatagatagatagat
agatagacagatagataacaggtgatagaccttatttgaggaatgactga
tatacaaagaactgcacattttcatttgtgtgtaattttagtgtgatatc
aacaaagttactgtattaactatctaagttatcttcccatattttatatc
t
gaattcttttgtcaggggagactgcccacagttatcatcaattccacacc
atgacctgccatgctgctcagttcactccagccatggtcatgaattgcac
acagaatttccactctgtgctccatagattttgttttaatagatgtgtgt
gttgattgggatggacgctgctgccttgaagtgtgcttgctatgtatcct
gcctcattcagaagcatggagggtcagggagttcaggcctcggtggcact
ggaaacactgagaacaaaactacaaagacttcaggaattcattgaggtga
tcagggccgaccgagcagagtcgatgttggatggacttctctctgagaca
cagataaggtttttctttcattcttctaaaagcaagttgtgttgttggat
ccctgggaggaatgtgaaagacatcacttagcagattatccagggactga
ctagaaaaaccgtctcagagaaaatatatttctcctttatatcaccccaa
gttactcatctgtctttagtcttatttagttactaaattggaaaccacgc
atctattttctaagtctgtttctacacgttcagttcacaaaagaagtata
gtaaatatgaaggcaaaaccaaaataactcacagaacgattgatttcaaa
cagtgagccagagtctgtcagccatgttgtctaatggacttctgtctaga
tctgacccaagtcatgttgcagagaacgttctaagagagcctttgcctaa
accactctgaacatacataatctcagctgctctcagaagctacaaaggga
gggtcttcactggttagcatctcgatgagtatagttctgagggttatgaa
tgcttcagtcctccaatgtcacgcttccctcctctggaaaccagggacgg
attttttgctcgaaatcataaaatttatctgagaccttaggcctctccag
acacatgtgcttaagacctacagaacactctccctttagattttggctgc
ccatgataaactactcctttcttactgatctacaaatcaggtcgtctgca
gcacgtcatgacgagaattctatctttaccttgagaaaattaaatatgag
aaggaaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68571305_68572099
seq2: B6Ng01-330M10.b_48_848 (reverse)

seq1  AGATAT-AAATATGGG-AGAT-ACTTAGATAGTTAATACAGTAACTTTGT  47
      |||||| ||||||||| |||| ||||||||||||||||||||||||||||
seq2  AGATATAAAATATGGGAAGATAACTTAGATAGTTAATACAGTAACTTTGT  50

seq1  TGATATCACACT-AAATTACACAC-AATG-AAATGTGCAGTTCTTTGTAT  94
      |||||||||||| ||||||||||| |||| ||||||||||||||||||||
seq2  TGATATCACACTAAAATTACACACAAATGAAAATGTGCAGTTCTTTGTAT  100

seq1  ATCAGTCATTCCTCAAATAAGGTCTATCACCTGTTATCTATCTGTCTATC  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTCATTCCTCAAATAAGGTCTATCACCTGTTATCTATCTGTCTATC  150

seq1  TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCA  200

seq1  TGCATGTGTGCATTAGTTAGACATATGCACAGATTATTTATCAGTACAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTGCATTAGTTAGACATATGCACAGATTATTTATCAGTACAAA  250

seq1  CATCAGTGTGTGCTACTTATATCTTCCATTCCTGTTTATTAAGTTCAGAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTGTGTGCTACTTATATCTTCCATTCCTGTTTATTAAGTTCAGAT  300

seq1  ATGAAGTGACAAAGATGCCCTTAGGGCCTGAGTGCCAACAACCAGCTGAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTGACAAAGATGCCCTTAGGGCCTGAGTGCCAACAACCAGCTGAG  350

seq1  TCTGAAGTTGGAATCTTCTGCTCTATTCACCTAACCATTCTGCTACTGTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTTGGAATCTTCTGCTCTATTCACCTAACCATTCTGCTACTGTA  400

seq1  CACTTATCTGAGCTACATTTCTGACTGGAAATGGCCCTTTCATCTCCACC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATCTGAGCTACATTTCTGACTGGAAATGGCCCTTTCATCTCCACC  450

seq1  TACCTCCCCTTCTGTGGTTACCACACAGGCAAACAGCTGTCCTGGTTCAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCCTTCTGTGGTTACCACACAGGCAAACAGCTGTCCTGGTTCAA  500

seq1  AAAGTACCTTCCTTTGCACAATCCTCCTTAAACTGCTGAGTCTGGTGTGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACCTTCCTTTGCACAATCCTCCTTAAACTGCTGAGTCTGGTGTGG  550

seq1  AGAAAACAGATTAAGTGCAGCTCACATAAAAAGAATGTGCAGCACACTGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAGATTAAGTGCAGCTCACATAAAAAGAATGTGCAGCACACTGG  600

seq1  CCTATGGCCTCCAACGGAGAGATCTACACACATATCTGAAGTCTCCGTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGCCTCCAACGGAGAGATCTACACACATATCTGAAGTCTCCGTTT  650

seq1  AGACATATGAATGGTGGCTTGTCTTAGAAGAAAAATTAACTCACTCACTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATATGAATGGTGGCTTGTCTTAGAAGAAAAATTAACTCACTCACTT  700

seq1  CATTTGAGCATTTATTGCCAACTGTTTTTCTCCATGCAAAATAATTTTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAGCATTTATTGCCAACTGTTTTTCTCCATGCAAAATAATTTTTT  750

seq1  TTCTTGGAGAAATGTCCCAAGTCCCACTACATTGTTCTTTATCAGGAATT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGAGAAATGTCCCAAGTCCCACTACATTGTTCTTTATCAGGAATT  800

seq1  C  795
      |
seq2  C  801

seq1: chr13_68454832_68455954
seq2: B6Ng01-330M10.g_68_1178

seq1  GAATTCTTTTGTCAGGGGAGACTGCCCACAGTTATCATCAATTCCACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTCAGGGGAGACTGCCCACAGTTATCATCAATTCCACACC  50

seq1  ATGACCTGCCATGCTGCTCAGTTCACTCCAGCCATGGTCATGAATTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTGCCATGCTGCTCAGTTCACTCCAGCCATGGTCATGAATTGCAC  100

seq1  ACAGAATTTCCACTCTGTGCTCCATAGATTTTGTTTTAATAGATGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATTTCCACTCTGTGCTCCATAGATTTTGTTTTAATAGATGTGTGT  150

seq1  GTTGATTGGGATGGACGCTGCTGCCTTGAAGTGTGCTTGCTATGTATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTGGGATGGACGCTGCTGCCTTGAAGTGTGCTTGCTATGTATCCT  200

seq1  GCCTCATTCAGAAGCATGGAGGGTCAGGGAGTTCAGGCCTCGGTGGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATTCAGAAGCATGGAGGGTCAGGGAGTTCAGGCCTCGGTGGCACT  250

seq1  GGAAACACTGAGAACAAAACTACAAAGACTTCAGGAATTCATTGAGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACTGAGAACAAAACTACAAAGACTTCAGGAATTCATTGAGGTGA  300

seq1  TCAGGGCCGACCGAGCAGAGTCGATGTTGGATGGACTTCTCTCTGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCCGACCGAGCAGAGTCGATGTTGGATGGACTTCTCTCTGAGACA  350

seq1  CAGATAAGGTTTTTCTTTCATTCTTCTAAAAGCAAGTTGTGTTGTTGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAAGGTTTTTCTTTCATTCTTCTAAAAGCAAGTTGTGTTGTTGGAT  400

seq1  CCCTGGGAGGAATGTGAAAGACATCACTTAGCAGATTATCCAGGGACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGAGGAATGTGAAAGACATCACTTAGCAGATTATCCAGGGACTGA  450

seq1  CTAGAAAAACCGTCTCAGAGAAAATATATTTCTCCTTTATATCACCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAACCGTCTCAGAGAAAATATATTTCTCCTTTATATCACCCCAA  500

seq1  GTTACTCATCTGTCTTTAGTCTTATTTAGTTACTAAATTGGAAACCACGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCATCTGTCTTTAGTCTTATTTAGTTACTAAATTGGAAACCACGC  550

seq1  ATCTATTTTCTAAGTCTGTTTCTACACGTTCAGTTCACAAAAGAAGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTCTAAGTCTGTTTCTACACGTTCAGTTCACAAAAGAAGTATA  600

seq1  GTAAATATGAAGGCAAAACCAAAATAACTCACAGAACGATTGATTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATATGAAGGCAAAACCAAAATAACTCACAGAACGATTGATTTCAAA  650

seq1  CAGTGAGCCAGAGTCTGTCAGCCATGTTGTCTAATGGACTTCTGTCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCCAGAGTCTGTCAGCCATGTTGTCTAATGGACTTCTGTCTAGA  700

seq1  TCTGACCCAAGTCATGTTGCAGAGAACGTTCTAAGAGAGCCTTTGCCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCCAAGTCATGTTGCAGAGAACGTTCTAAGAGAGCCTTTGCCTAA  750

seq1  ACCACTCTGAACATACATAATCTCAGCTGCTCTCAGAAGCTACAAAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCTGAACATACATAATCTCAGCTGCTCTCAGAAGCTACAAAGGGA  800

seq1  GGGTCTTCACTGGTTAGCATCTCGATGAGTATAGTTCTGAGGGTTATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTCACTGGTTAGCATCTCGATGAGTATAGTTCTGAGGGTTATGAA  850

seq1  TGCTTCAGTCCTCCAATGTCACGCTTCCCTCCTCTGGAAACCAGGGACGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGTCCTCCAATGTCACGCTTCCCTCCTCTGGAAACCAGGGACGG  900

seq1  ATTTTTTTGCTCGAAATCATAAAATTTATCTGAGACCTTTAGGCCTCTTC  950
      | ||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  A-TTTTTTGCTCGAAATCATAAAATTTATCTGAGACC-TTAGGCCTC-TC  947

seq1  CAGACAACATGTGCTTAAAGACCTACAGAAACAACCTCTTCCCTTTAGAT  1000
      ||||| |||||||||| ||||||||||| ||||  ||| |||||||||||
seq2  CAGAC-ACATGTGCTT-AAGACCTACAG-AACA--CTC-TCCCTTTAGAT  991

seq1  TTTGGCTGCCCCATGATAAAACTTACTCCTTTCTTAACTGATCTACAAAT  1050
      |||||||| |||||||||||   |||||||||||| ||||||||||||||
seq2  TTTGGCTG-CCCATGATAAA--CTACTCCTTTCTT-ACTGATCTACAAAT  1037

seq1  CAGGTCGTCTGCAGCACGGTCATGACCGAG-ATCCTATCTTTACC-TGAG  1098
      ||||||||||||||||| ||||||| |||| || ||||||||||| ||||
seq2  CAGGTCGTCTGCAGCAC-GTCATGA-CGAGAATTCTATCTTTACCTTGAG  1085

seq1  AAAA-TAAATATGAGAAGGAAAAATG  1123
      |||| |||||||||||||||||||||
seq2  AAAATTAAATATGAGAAGGAAAAATG  1111