BAC Information

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BAC

Clone NameB6Ng01-332L24
Chromosome13 (Build37)
Map Location 3,594,376 - 3,595,493
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667375, LOC544917, LOC236294, Speer6-ps1, LOC674228, LOC667411, LOC100039182, 2810429I04Rik, Gdi2
Downstream geneAsb13, Calml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332L24.bB6Ng01-332L24.g
ACCGA118762GA118763
length1,0211,102
definitionB6Ng01-332L24.b B6Ng01-332L24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgaactttccaagacttttatcatgaatgggtattggatgttt
tcaaatgctttctcagcatctaacgagatgatcatgtggtttttgtcttt
gagttttttatatagtggattacgtttatggatttccgtatattatacca
tctctgcatccctggaataaagcctacttggtcaggatggatgattgttt
tgatgtgttcttggattcggttagcaagaattttattgagtatttttgca
tcgatattcataagggaaattggtctgaagttctctatctttgttgggtc
tttctgtggtttaggtatcagagtaattgtggcttcgtagaatgaattgg
gtaaagtaccttctgtttctcttttatggaatagtttatgaagaactgga
attagattttctttgaaggtctgatagaactctgtactaaacccatctgg
tcctgggctttttttggttgggagactattaatgactgtttctatttctt
taaaggatataggactgtttagatcattaatctgatcctgatttaacttt
ggtacctggtctctgtctagaaatttgtccgtttcatccaggttttccag
ttttgttgagtatagctttttgcagaaggatctgatggtgttttggattt
cgtcaggatctgttcttatgtctcccttttcatttctgattttgttaatt
aggatggtgtccctgtgccctctagtgagtctggctaagggtttatctat
cttgttgattttcttaaagaaccagctccctcgtttggttgagtcttttg
ggttttttttttttttaagttctttttgtttccacttggttgattcgccc
cttttttttattatttccttgctgtctactcttcttgggtgaatttgctt
tctttgttctagagtttttaggtgtgttgtcaagctgctagtgtgtgctc
tctctagttctttagaagcacttcagagctattgagttttcctcttagag
atgctttcattggtgtcccat
gaattctttaaaacagtagctattcccgagtctcatttcttctgttatga
aaaagaaacagcttgtataaacccctggataatggttaaaagtggctttc
aaagaagcatctcagaagtggtattgtgactaatgcaaatgtactagata
tttaatgttatcaagaaaacaaagacttgttcttttagttaggaatataa
aatgactataagctgagatgtaaggaaaatgaaaatgtcagttacaatag
tatgtatgttaatattaacagtgaaaactctcctggtaagctaaataatg
cagtgaacacttaggtaccaacttcctatataaaggaaaaaatgacactt
gaaattagtgatcttaccaattccttatttttaacatattccattagctt
atctatgttttctccttgtttgtttgtcaattcaacttcatataagtcaa
agcataaatcttgacaacaaactgtagaggaaattagaaagataagaaca
ttttaaattttaattaaaaaattccagttatatcacattttgatcacata
cactcccactgccctttcttcaggaaaaatacatatgtacgtacacaggg
tttcactatgtattcttggttggcctacaacttgccatatagaccagggt
gaccttgaactcagagacctatctgcctgtctccttacagttgggattaa
agacacatgccaccacaccttgcctcagaacttatatttcaattctctaa
acaaacaattttcaaaatatttattgtttaaacccttcttaaaatgtact
ttaatcctaacacttaaaagacaggcagaagcaagaagatctctgggagt
tcaaggccagcctggtctacatagtgagttccaaggcaggcagaattatg
caatgataccttatctccaaacaagatattctctcttacactgctacaaa
attaacaataaatactagacaaatatcagtgcttcatgatacgtaacaaa
tttctcatatatttaattttgtatttgtttggagaagggtatcacatgtg
ctctggtgacctagactttcatgtagccaagctggtctcaacttatagag
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_3594376_3595493
seq2: B6Ng01-332L24.g_67_1168

seq1  GAATTCTTTAAAACAGTAGCTATTCCCGAGTCTCATTTCTTCTGTTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAACAGTAGCTATTCCCGAGTCTCATTTCTTCTGTTATGA  50

seq1  AAAAGAAACAGCTTGTATAAACCCCTGGATAATGGTTAAAAGTGGCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACAGCTTGTATAAACCCCTGGATAATGGTTAAAAGTGGCTTTC  100

seq1  AAAGAAGCATCTCAGAAGTGGTATTGTGACTAATGCAAATGTACTAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCATCTCAGAAGTGGTATTGTGACTAATGCAAATGTACTAGATA  150

seq1  TTTAATGTTATCAAGAAAACAAAGACTTGTTCTTTTAGTTAGGAATATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTTATCAAGAAAACAAAGACTTGTTCTTTTAGTTAGGAATATAA  200

seq1  AATGACTATAAGCTGAGATGTAAGGAAAATGAAAATGTCAGTTACAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTATAAGCTGAGATGTAAGGAAAATGAAAATGTCAGTTACAATAG  250

seq1  TATGTATGTTAATATTAACAGTGAAAACTCTCCTGGTAAGCTAAATAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTTAATATTAACAGTGAAAACTCTCCTGGTAAGCTAAATAATG  300

seq1  CAGTGAACACTTAGGTACCAACTTCCTATATAAAGGAAAAAATGACACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAACACTTAGGTACCAACTTCCTATATAAAGGAAAAAATGACACTT  350

seq1  GAAATTAGTGATCTTACCAATTCCTTATTTTTAACATATTCCATTAGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAGTGATCTTACCAATTCCTTATTTTTAACATATTCCATTAGCTT  400

seq1  ATCTATGTTTTCTCCTTGTTTGTTTGTCAATTCAACTTCATATAAGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTTTTCTCCTTGTTTGTTTGTCAATTCAACTTCATATAAGTCAA  450

seq1  AGCATAAATCTTGACAACAAACTGTAGAGGAAATTAGAAAGATAAGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAATCTTGACAACAAACTGTAGAGGAAATTAGAAAGATAAGAACA  500

seq1  TTTTAAATTTTAATTAAAAAATTCCAGTTATATCACATTTTGATCACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTTTAATTAAAAAATTCCAGTTATATCACATTTTGATCACATA  550

seq1  CACTCCCACTGCCCTTTCTTCAGGAAAAATACATATGTACGTACACAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCACTGCCCTTTCTTCAGGAAAAATACATATGTACGTACACAGGG  600

seq1  TTTCACTATGTATTCTTGGTTGGCCTACAACTTGCCATATAGACCAGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTATGTATTCTTGGTTGGCCTACAACTTGCCATATAGACCAGGGT  650

seq1  GACCTTGAACTCAGAGACCTATCTGCCTGTCTCCTTACAGTTGGGATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGAACTCAGAGACCTATCTGCCTGTCTCCTTACAGTTGGGATTAA  700

seq1  AGACACATGCCACCACACCTTGCCTCAGAACTTATATTTCAATTCTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATGCCACCACACCTTGCCTCAGAACTTATATTTCAATTCTCTAA  750

seq1  ACAAACAATTTTCAAAATATTTATTGTTTAAACCCTTCTTAAAATGTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAATTTTCAAAATATTTATTGTTTAAACCCTTCTTAAAATGTACT  800

seq1  TTAATCCTAACACTTAAAAGACAGGCAGAAGCAAGAAGATCTCTGGGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCTAACACTTAAAAGACAGGCAGAAGCAAGAAGATCTCTGGGAGT  850

seq1  TCAAGGCCAGCCTGGTCTACATAGTGAGTTCCAAGGCAGGCAGAATTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCAGCCTGGTCTACATAGTGAGTTCCAAGGCAGGCAGAATTATG  900

seq1  CAATGATACCTTATCTCCAAACAAGATATTCTCTCTTACACTGCTACAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATACCTTATCTCCAAACAAGATATTCTCTCTTACACTGCTACAAA  950

seq1  ATTAACAATAAATACTAGACAAAATATCAGTGCTTCATGAATTACGTAAC  1000
      |||||||||||||||||||| |||||||||||||||||||  ||||||||
seq2  ATTAACAATAAATACTAGAC-AAATATCAGTGCTTCATGA--TACGTAAC  997

seq1  AAAATTTTCTCATATATTTTAATTTTTGTTATTTGTTTGGAGAAAGGGTA  1050
      |||  ||||||||||| |||||||||   ||||||||||||| |||||||
seq2  AAA--TTTCTCATATA-TTTAATTTT--GTATTTGTTTGGAG-AAGGGTA  1041

seq1  TCACAATGTTGCTCTGGTTGACCTAGAACTTTCAATGTAGCCCAAGCTGG  1100
      |||| ||| |||||||| |||||||| |||||| |||||| |||||||||
seq2  TCAC-ATG-TGCTCTGG-TGACCTAG-ACTTTC-ATGTAG-CCAAGCTGG  1085

seq1  TCTCAAACTAATAGAGAT  1118
      |||| |||| ||||||||
seq2  TCTC-AACTTATAGAGAT  1102