BAC Information

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BAC

Clone NameB6Ng01-332P03
Chromosome13 (Build37)
Map Location 99,694,931 - 99,843,576
singlet/doubletdoublet
Overlap geneTnpo1, LOC100039771, 1700024P04Rik, LOC100039967
Upstream geneRgnef, LOC667703, Utp15, Ankra2, EG667718, Btf3, Foxd1, LOC100039827, LOC100039665, LOC100039854, LOC218501, Tmem174, Tmem171, LOC669675, Fcho2, EG432798
Downstream geneLOC100039797, Zfp366, Ptcd2, Mrps27, Mtap1b, Cartpt, Mccc2, Bdp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332P03.bB6Ng01-332P03.g
ACCGA118900GA118901
length1,131993
definitionB6Ng01-332P03.b B6Ng01-332P03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,694,931 - 99,696,076)(99,842,584 - 99,843,576)
sequence
gaattcagtaatttctggccagggcaggatggaaaagcacatggctaatg
gaaggccgaggccctcttcagaaagggaagacgaaccactcacagtgcag
taggtgtacacggactcaagtaaaagctgaattgccaaaccactattcac
ccacacacggcaagtgtcaaggagtttaaaataaatcggccacctctaaa
gtagtatttttcctttgcacttgcaaatttccacatagaccagccattct
ctagaaccaggacggagggttacaggacagtaacaaggatcacttctcac
caactacaaaccatccacttacttcattagcacactttcttaccacactt
aagtgaaagtttcgatagggaaactcaaaacccagcaggtacttttggta
tcctaaagatgaacacgtctgagcgtgcacattgcagacagacaggtcag
ttccaaatactgatttcaccgaatattttgcatttaaggagcgtcttctc
tttaggggggaaaagcattgcttacgtactcattgaagccatcactgttt
ttcgaacaggacatactaagcttcttaatacaatctccccaactagtgga
cagcctctgacttcgtttctacagttaacagctgattcgcgactggcgta
acaaagtgaaactgtaaacaatccctgcaaaccccacgtgattaaaaaaa
attaagccccgcgagatcatttctaagaggaagaaagcctttctaaagcc
agtttgattgtggtggcgggtctgttcctcggcggcccttccccgtggcg
tgggcagacagaggcagacgtgcaaaacccacaaacctaagcaaaacccg
tagttacaaacattaaaattatgttcacaggtcgcgaggccagcaggccc
tcgggggagacggatcagctggctgcagaaaccggagtgtgcgaggctcc
gggacaaagaccggcgacctcgggccctcgcaccgtgcggctgacgggca
tcgcagcggctcggccgcagcctcccgccacccccagacgactccgctct
gggcgccgcctgccttgttcgggaccgcaggcgccgggaccgcagctgtt
gggcttagatcgcgccgtcgcggcggctcca
gaattcagctgctctgagaaacgatatgtggctagtcatgctgtattgga
cctaagagcaataagaccttgcactaatctcagagggtctgctcactaag
aactggtaccctaaagttattcttcccttcaacagaaataagaatatggg
agctacaagcctcttctccatcactatttgttcctgaggcagtagttcat
tccctgccagcaggactctctggtctcctccagggcatcagacagagggt
ggccatccttcaaacatctctcacgctatgttttacaagctgatattcct
aagggaagataaaaaaaattaataagcttttctaagtgcaaatggaaatg
ggaagacatggggacacaatgggacacctgctggtaagtgagtcttgctg
ggaggagtcttttgacctggttaacatccaatttcagtagccggagagcg
tccccgagcctcatgtcaggtttatccctcacacgatcttcttaatgaag
aaaagcaagctggaaacgccacagtgctgtgtggatcaccatcccctgga
gagctgtgtaggaaagctataatgaagtgagtacataattcaatgttaat
gtataaaacacatgacgctttgtaaaaataaaataaaattcacgttctca
agggcttttgaattcactgggcaatacctacagcaagtttgatcaagtta
cagatttctatcccagagctctgccaattcgtcacgacttgtacccaaca
tcctcctggccatcagaagtgatacggctgctgaagtctagtgtcctagt
ttgcattctgtggctgtgatgagtaacaggacaaaagcagcaactgggga
aggaaaggatttgtttagtgtacactttgtttagagggacacatcacagt
ccctcactgagggaagtcaagacagggaccatgaggtaggaattgaaagg
aggggctaaggaggaccactgcttactgacaggctgctcccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_99694931_99696076
seq2: B6Ng01-332P03.b_46_1176

seq1  GAATTCAGTAATTTCTGGCCAGGGCAGGATGGAAAAGCACATGGCTAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAATTTCTGGCCAGGGCAGGATGGAAAAGCACATGGCTAATG  50

seq1  GAAGGCCGAGGCCCTCTTCAGAAAGGGAAGACGAACCACTCACAGTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCGAGGCCCTCTTCAGAAAGGGAAGACGAACCACTCACAGTGCAG  100

seq1  TAGGTGTACACGGACTCAAGTAAAAGCTGAATTGCCAAACCACTATTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTACACGGACTCAAGTAAAAGCTGAATTGCCAAACCACTATTCAC  150

seq1  CCACACACGGCAAGTGTCAAGGAGTTTAAAATAAATCGGCCACCTCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACGGCAAGTGTCAAGGAGTTTAAAATAAATCGGCCACCTCTAAA  200

seq1  GTAGTATTTTTCCTTTGCACTTGCAAATTTCCACATAGACCAGCCATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATTTTTCCTTTGCACTTGCAAATTTCCACATAGACCAGCCATTCT  250

seq1  CTAGAACCAGGACGGAGGGTTACAGGACAGTAACAAGGATCACTTCTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACCAGGACGGAGGGTTACAGGACAGTAACAAGGATCACTTCTCAC  300

seq1  CAACTACAAACCATCCACTTACTTCATTAGCACACTTTCTTACCACACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACAAACCATCCACTTACTTCATTAGCACACTTTCTTACCACACTT  350

seq1  AAGTGAAAGTTTCGATAGGGAAACTCAAAACCCAGCAGGTACTTTTGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAAGTTTCGATAGGGAAACTCAAAACCCAGCAGGTACTTTTGGTA  400

seq1  TCCTAAAGATGAACACGTCTGAGCGTGCACATTGCAGACAGACAGGTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAGATGAACACGTCTGAGCGTGCACATTGCAGACAGACAGGTCAG  450

seq1  TTCCAAATACTGATTTCACCGAATATTTTGCATTTAAGGAGCGTCTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATACTGATTTCACCGAATATTTTGCATTTAAGGAGCGTCTTCTC  500

seq1  TTTAGGGGGGAAAAGCATTGCTTACGTACTCATTGAAGCCATCACTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGGGGAAAAGCATTGCTTACGTACTCATTGAAGCCATCACTGTTT  550

seq1  TTCGAACAGGACATACTAAGCTTCTTAATACAATCTCCCCAACTAGTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAACAGGACATACTAAGCTTCTTAATACAATCTCCCCAACTAGTGGA  600

seq1  CAGCCTCTGACTTCGTTTCTACAGTTAACAGCTGATTCGCGACTGGCGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTGACTTCGTTTCTACAGTTAACAGCTGATTCGCGACTGGCGTA  650

seq1  ACAAAGTGAAACTGTAAACAATCCCTGCAAACCCCACGTGATTAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAAACTGTAAACAATCCCTGCAAACCCCACGTGATTAAAAAAA  700

seq1  ATTAAGCCCCGCGAGATCATTTCTAAGAGGAAGAAAGCCTTTCTAAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCCCCGCGAGATCATTTCTAAGAGGAAGAAAGCCTTTCTAAAGCC  750

seq1  AGTTTGATTGTGGTGGCGGGTCTGTTCCTCGGCGGCCCTTCCCCGTGGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGATTGTGGTGGCGGGTCTGTTCCTCGGCGGCCCTTCCCCGTGGCG  800

seq1  TGGGCAGACAGAGGCAGACGTGCAAAACCCACAAACCTAAGCAAAACCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGACAGAGGCAGACGTGCAAAACCCACAAACCTAAGCAAAACCCG  850

seq1  TAGTTACAAACATTAAAATTATGTTCACAGGTCGCGAGGCCAGCAGGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACAAACATTAAAATTATGTTCACAGGTCGCGAGGCCAGCAGGCCC  900

seq1  TCGGGGGAGACGGATCAGCTGGCTGCAGAAACCGGAGTGTGCGAGGCTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGGAGACGGATCAGCTGGCTGCAGAAACCGGAGTGTGCGAGGCTCC  950

seq1  GGGACAAAGACCGGCGACCTCGGGCCCTCGCACCGTGCGGCCTGACGGGC  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGGACAAAGACCGGCGACCTCGGGCCCTCGCACCGTGCGG-CTGACGGGC  999

seq1  ATCGCAGCGGCTCGGCCCGCCAGCCTCCCGCCACCCCCAGGACCGACCTC  1050
      |||||||||||||||||   ||||||||||||||||||||   ||||   
seq2  ATCGCAGCGGCTCGGCC--GCAGCCTCCCGCCACCCCCAG--ACGAC--T  1043

seq1  CCGCTCCTGGGGCGCCGCCTGCCCTGTCCGGGACCCGCAGGGCGCCCGGG  1100
      ||||||   |||||||||||||| ||| ||||| ||||| |||| |||||
seq2  CCGCTC--TGGGCGCCGCCTGCCTTGTTCGGGA-CCGCA-GGCG-CCGGG  1088

seq1  ACCGCAGCTGTTGGGCTTAGAACCGCGCCGTCGCCGGCGGGCTCCA  1146
      |||||||||||||||||||| | |||||||||| |||| |||||||
seq2  ACCGCAGCTGTTGGGCTTAG-ATCGCGCCGTCG-CGGC-GGCTCCA  1131

seq1: chr13_99842584_99843576
seq2: B6Ng01-332P03.g_71_1063 (reverse)

seq1  TGGGGAGCAAGCCTGTCAGTAAGCAGTGGTCCTCCTTAGCCCCTCC-TTC  49
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  TGGGGAGC-AGCCTGTCAGTAAGCAGTGGTCCTCCTTAGCCCCTCCTTTC  49

seq1  AATTCCTACCTCATGGTCCCTGTCTTGACTTCCCTCAGTGAGGGACTGTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTACCTCATGGTCCCTGTCTTGACTTCCCTCAGTGAGGGACTGTG  99

seq1  ATGTGTCCCTCTAAACAAAGTGTACACTAAACAAATCCTTTCCTTCCCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCCCTCTAAACAAAGTGTACACTAAACAAATCCTTTCCTTCCCCA  149

seq1  GTTGCTGCTTTTGTCCTGTTACTCATCACAGCCACAGAATGCAAACTAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGCTTTTGTCCTGTTACTCATCACAGCCACAGAATGCAAACTAGG  199

seq1  ACACTAGACTTCAGCAGCCGTATCACTTCTGATGGCCAGGAGGATGTTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGACTTCAGCAGCCGTATCACTTCTGATGGCCAGGAGGATGTTGG  249

seq1  GTACAAGTCGTGACGAATTGGCAGAGCTCTGGGATAGAAATCTGTAACTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTCGTGACGAATTGGCAGAGCTCTGGGATAGAAATCTGTAACTT  299

seq1  GATCAAACTTGCTGTAGGTATTGCCCAGTGAATTCAAAAGCCCTTGAGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAACTTGCTGTAGGTATTGCCCAGTGAATTCAAAAGCCCTTGAGAA  349

seq1  CGTGAATTTTATTTTATTTTTACAAAGCGTCATGTGTTTTATACATTAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAATTTTATTTTATTTTTACAAAGCGTCATGTGTTTTATACATTAAC  399

seq1  ATTGAATTATGTACTCACTTCATTATAGCTTTCCTACACAGCTCTCCAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTATGTACTCACTTCATTATAGCTTTCCTACACAGCTCTCCAGG  449

seq1  GGATGGTGATCCACACAGCACTGTGGCGTTTCCAGCTTGCTTTTCTTCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTGATCCACACAGCACTGTGGCGTTTCCAGCTTGCTTTTCTTCAT  499

seq1  TAAGAAGATCGTGTGAGGGATAAACCTGACATGAGGCTCGGGGACGCTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGATCGTGTGAGGGATAAACCTGACATGAGGCTCGGGGACGCTCT  549

seq1  CCGGCTACTGAAATTGGATGTTAACCAGGTCAAAAGACTCCTCCCAGCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCTACTGAAATTGGATGTTAACCAGGTCAAAAGACTCCTCCCAGCAA  599

seq1  GACTCACTTACCAGCAGGTGTCCCATTGTGTCCCCATGTCTTCCCATTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACTTACCAGCAGGTGTCCCATTGTGTCCCCATGTCTTCCCATTTC  649

seq1  CATTTGCACTTAGAAAAGCTTATTAATTTTTTTTATCTTCCCTTAGGAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCACTTAGAAAAGCTTATTAATTTTTTTTATCTTCCCTTAGGAAT  699

seq1  ATCAGCTTGTAAAACATAGCGTGAGAGATGTTTGAAGGATGGCCACCCTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTTGTAAAACATAGCGTGAGAGATGTTTGAAGGATGGCCACCCTC  749

seq1  TGTCTGATGCCCTGGAGGAGACCAGAGAGTCCTGCTGGCAGGGAATGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGATGCCCTGGAGGAGACCAGAGAGTCCTGCTGGCAGGGAATGAAC  799

seq1  TACTGCCTCAGGAACAAATAGTGATGGAGAAGAGGCTTGTAGCTCCCATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCTCAGGAACAAATAGTGATGGAGAAGAGGCTTGTAGCTCCCATA  849

seq1  TTCTTATTTCTGTTGAAGGGAAGAATAACTTTAGGGTACCAGTTCTTAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTCTGTTGAAGGGAAGAATAACTTTAGGGTACCAGTTCTTAGT  899

seq1  GAGCAGACCCTCTGAGATTAGTGCAAGGTCTTATTGCTCTTAGGTCCAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGACCCTCTGAGATTAGTGCAAGGTCTTATTGCTCTTAGGTCCAAT  949

seq1  ACAGCATGACTAGCCACATATCGTTTCTCAGAGCAGCTGAATTC  993
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATGACTAGCCACATATCGTTTCTCAGAGCAGCTGAATTC  993