BAC Information

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BAC

Clone NameB6Ng01-334C10
Chromosome13 (Build37)
Map Location 79,442,442 - 79,443,695
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622365, LOC100043052, EG666883
Downstream geneLOC666925, LOC382780, EG666933
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334C10.b
ACCGA119727
length1,219
definitionB6Ng01-334C10.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaattctattctgggctaggttcatgatttttaaagttatactg
tgccatctacaaaggaaggtgtttttatatgcacccctacttacttgtca
gaagttgtccaaaatgaccatctataactgaagagatgcatgaatattgg
gaaattatgaaatgtgctaccaaattgttttttttttcatgtaacatttc
tacctaatgtttctttccttattctattttcaattcattttacttcgtat
atgactctgtttcctacattcttcttatctttaaaaactctcatattcca
aattatacatttctagtttccctgattaagagtagttcttctagcttttg
aaatataggcttagggattactcagaagactaattttgtttgtattctta
gcattatgaaaatgttctgtgtattatccagaagatgagctctcaggaca
gtcttgtgctcttcatgagctttctagaataggagctgtttctcggagaa
tgaggaagagtttcctgaaagtaggaaaggtttgacacagacattacatt
tatgactgaatgctacaaagtcttttacttcctgaatgttgtctggttgt
ttttctttctgttatttattatctgttgcaagaaccttctctagaagagt
ttaccagcatatgtatctgtagcaggaaaggtggggccacctctgagtaa
acgctgggagctgtgcacctgcaaaagcatctcctgcagaggacctaatt
gaggactgcctgggagatcaaggattgctaatgcaaataatgcctgtcaa
ttgggatctgttgtttagaagagatgctctcttgagacccatgggggcaa
tgggtggagggtattaaaggagtgctcagatgagcttgcagtggtgtttc
tcacctgctcctggagtctgtattgactctgcaccaactaatcccaaacc
ccaagggcaggtaggatagtgagagagtgtctacggtacagcacactacc
tataccatatatcattagatcatcatatggctatgtcattttgtatcata
atttcagtatacttttccctagagcaatggagttattagtctccatgtgc
tgacctcccctacaggttgaggtgtggtccaatacctggaaattatcaac
agtgtgttacctccctataacctctctacaaattaagggaattgcagcag
tcacgttgtaactctatta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79442442_79443695
seq2: B6Ng01-334C10.b_47_1265

seq1  GAATTCAAATTCTATTCTGGGCTAGGTTCATGATTTTTAAAGTTATACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTCTATTCTGGGCTAGGTTCATGATTTTTAAAGTTATACTG  50

seq1  TGCCATCTACAAAGGAAGGTGTTTTTATATGCACCCCTACTTACTTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTACAAAGGAAGGTGTTTTTATATGCACCCCTACTTACTTGTCA  100

seq1  GAAGTTGTCCAAAATGACCATCTATAACTGAAGAGATGCATGAATATTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGTCCAAAATGACCATCTATAACTGAAGAGATGCATGAATATTGG  150

seq1  GAAATTATGAAATGTGCTACCAAATTGTTTTTTTTTTCATGTAACATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATGAAATGTGCTACCAAATTGTTTTTTTTTTCATGTAACATTTC  200

seq1  TACCTAATGTTTCTTTCCTTATTCTATTTTCAATTCATTTTACTTCGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAATGTTTCTTTCCTTATTCTATTTTCAATTCATTTTACTTCGTAT  250

seq1  ATGACTCTGTTTCCTACATTCTTCTTATCTTTAAAAACTCTCATATTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCTGTTTCCTACATTCTTCTTATCTTTAAAAACTCTCATATTCCA  300

seq1  AATTATACATTTCTAGTTTCCCTGATTAAGAGTAGTTCTTCTAGCTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATACATTTCTAGTTTCCCTGATTAAGAGTAGTTCTTCTAGCTTTTG  350

seq1  AAATATAGGCTTAGGGATTACTCAGAAGACTAATTTTGTTTGTATTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGGCTTAGGGATTACTCAGAAGACTAATTTTGTTTGTATTCTTA  400

seq1  GCATTATGAAAATGTTCTGTGTATTATCCAGAAGATGAGCTCTCAGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATGAAAATGTTCTGTGTATTATCCAGAAGATGAGCTCTCAGGACA  450

seq1  GTCTTGTGCTCTTCATGAGCTTTCTAGAATAGGAGCTGTTTCTCGGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTGCTCTTCATGAGCTTTCTAGAATAGGAGCTGTTTCTCGGAGAA  500

seq1  TGAGGAAGAGTTTCCTGAAAGTAGGAAAGGTTTGACACAGACATTACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGAGTTTCCTGAAAGTAGGAAAGGTTTGACACAGACATTACATT  550

seq1  TATGACTGAATGCTACAAAGTCTTTTACTTCCTGAATGTTGTCTGGTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTGAATGCTACAAAGTCTTTTACTTCCTGAATGTTGTCTGGTTGT  600

seq1  TTTTCTTTCTGTTATTTATTATCTGTTGCAAGAACCTTCTCTAGAAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTGTTATTTATTATCTGTTGCAAGAACCTTCTCTAGAAGAGT  650

seq1  TTACCAGCATATGTATCTGTAGCAGGAAAGGTGGGGCCACCTCTGAGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGCATATGTATCTGTAGCAGGAAAGGTGGGGCCACCTCTGAGTAA  700

seq1  ACGCTGGGAGCTGTGCACCTGCAAAAGCATCTCCTGCAGAGGACCTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGGGAGCTGTGCACCTGCAAAAGCATCTCCTGCAGAGGACCTAATT  750

seq1  GAGGACTGCCTGGGAGATCAAGGATTGCTAATGCAAATAATGCCTGTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTGCCTGGGAGATCAAGGATTGCTAATGCAAATAATGCCTGTCAA  800

seq1  TTGGGATCTGTTGTTTAGAAGAGATGCTCTCTTGAGACCCATGGGGGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATCTGTTGTTTAGAAGAGATGCTCTCTTGAGACCCATGGGGGCAA  850

seq1  TGGGTGGAGGGTATTAAAGGAGTGCTCAGATGAGCTTGCAGTGGTGTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGAGGGTATTAAAGGAGTGCTCAGATGAGCTTGCAGTGGTGTTTC  900

seq1  TCACCTGCTCCTGGAGTCTGTATTGACTCTGCACCAACTAATCCCAAACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGCTCCTGGAGTCTGTATTGACTCTGCACCAACTAATCCCAAACC  950

seq1  CCAAGGGCAGGTAGGATAAGGTGAAGAAGAG-GTGTCTACGGTACAGGCA  999
      ||||||||||||||||||  |||    |||| |||||||||||||||   
seq2  CCAAGGGCAGGTAGGATA--GTG----AGAGAGTGTCTACGGTACAG--C  992

seq1  ACACTTACCTATACCAATATATCATTAGGAATCATCATATGGCTATGTTC  1049
      |||| |||||||||| ||||||||||||  ||||||||||||||||| ||
seq2  ACAC-TACCTATACC-ATATATCATTAG--ATCATCATATGGCTATG-TC  1037

seq1  ATTTTGTATCATAATTTCAGTATACTTTTTCCCTAGAGCAAATGAGTTAT  1099
      ||||||||||||||||||||||||| |||||||||||||||  |||||| 
seq2  ATTTTGTATCATAATTTCAGTATAC-TTTTCCCTAGAGCAATGGAGTTA-  1085

seq1  TTAGTCT-CATGTGCTTGGCCTCACTAACAAGTTTGAGGTGTTGGTCCCA  1148
      ||||||| ||||||| || |||| |  || || |||||||| |||||| |
seq2  TTAGTCTCCATGTGC-TGACCTCCCCTAC-AGGTTGAGGTG-TGGTCCAA  1132

seq1  TAAACCTGAAATAAAATCAAACAGTAGTTGGTTA-CTCCC-ATAACACTC  1196
      |  ||||| || |  ||| |||||| ||  |||| ||||| ||||| |||
seq2  T--ACCTGGAA-ATTATC-AACAGT-GT--GTTACCTCCCTATAAC-CTC  1174

seq1  -CTACCAATATTTAAAAAGTGGATATTTTGCAGGCAGGTCACTGTTGTAA  1245
       |||| |||       ||| | |    ||||| ||| ||||| |||||||
seq2  TCTACAAAT------TAAGGGAA----TTGCA-GCA-GTCAC-GTTGTAA  1211

seq1  CTCTTATTA  1254
      ||| |||||
seq2  CTC-TATTA  1219


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