BAC Information

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BAC

Clone NameB6Ng01-334F16
Chromosome13 (Build37)
Map Location 6,527,431 - 6,527,960
singlet/doubletsinglet
Overlap genenone
Upstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395
Downstream genePitrm1, Pfkp, LOC100039532, LOC667611, EG623516
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334F16.bB6Ng01-334F16.g
ACCGA119877GA119878
length1,0291,211
definitionB6Ng01-334F16.b B6Ng01-334F16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatcattaggataaacttaatttccaagaatatccagtaaaaa
gtttgtaaaatgtaaggataaaaaaatgtagcacttagatttgcttggtt
tttttttttctaagaaaaaatttttaacccaagttatgacatggatgaga
aggggtcttctgagtagtaacaggagagtatcagggaacacctgatcttg
agaagatagagcagtaacaataaccaatgtcggacagccggccaccgtcc
ggaccagaggacaggtgtccgcttggcttgggaggcggcctcagcctcag
cagcagcggtcgccatcttggttccgggactcagcagaacttaggaaatt
agtctgaacaggtgagagggtgcgccagagaaccggacagcttctgggac
aggcggaagcacagagccgctgaggcagcacccttggcgggccgcagaca
gccggccaccatctggaccagaggacaggtgtccacctggcttgggaggc
ggcctcagcctcagcagcagcggtcgccatcttgattccgggactccctg
gaacttaggaatttagtctgcacaggtgagagtctgcaccacagaagctg
acagcttctgggaactgccaaagcaacacagcttctgagaaaggccctgt
tttgggccttcttcttcggccaggaggaggtccaaaaacaagatatctgt
gcaccttccctgtaggagagcttgccagcagagagtgctctgagcactga
aactcagaggagagaacctgtctcccaggtctgctgatagacggtaacag
aatcaccagaagaacaatctctaaacagagtcaactataactactaactc
cagagattaccagatggcgaaaggtaaacgtaggaatcttactaacagga
accaagaccactcaccatcatcagaacccagcactcccacttcgtccagt
ccaggacacccacacacctgaaacctagacctagatttaaaagcatatct
catgatgatggtagaggacatccaagaag
gaattctcacctgaggaataccaaatggatgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcataacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggaaaagatgtggataaagaggaacactcctccattgctgttg
ggattgcaagcttgtacaaccactcttgaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatctcgcaatacctctcctgggc
atatatccagaagacgttccaacttgtaataaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaatttagat
gtcactcaacagagaaatggatacagaaaacgtgatacatttacacaatg
aaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgagctaacccaatcacaaa
agaactcacatatgtacccactgataagtggatattaacccagaaactta
gaatacccaagttacaagttgcaaaacacatgaaactcaagaagaacgaa
gaacaaagtgtggtcactttgccctttcttaaaattgggaacaaaacagc
catggaagaagttacagatacaaagtttggagctgatacaaaaggatgga
ccatttagagactgccacacccggggatccatcccataatcagccttcca
aaggtagacaccaccgcacacaccagcaagatttttgctgaaaggaccct
gatagagctgtctcttgtgaggcaatgccagtgcctagcaaacacagaag
tggatgctcatagtcacctattggatggaacacagggccccaatggagga
gctaaagaaagtactcaaggagctaaaggggtctgcaaccctatagtgga
acaacaatatgactaaccagtacccccagagctcgtgtcttctagctctg
ctatgtagcagagatggcctagtcggcatcattaaggagaagagcctctt
ggtattgcaactttatatgccttagtacagggaacatcagggcccagatt
gatggaaggcgtagagagctatggtgaacttttggacttgcctgtgacta
ggtcaagaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_6527431_6527960
seq2: B6Ng01-334F16.b_48_577 (reverse)

seq1  ATGGCGACCGCTGCTGCTGAGGCTGAGGCCGCCTCCCAAGCCAGGTGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGACCGCTGCTGCTGAGGCTGAGGCCGCCTCCCAAGCCAGGTGGAC  50

seq1  ACCTGTCCTCTGGTCCAGATGGTGGCCGGCTGTCTGCGGCCCGCCAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCCTCTGGTCCAGATGGTGGCCGGCTGTCTGCGGCCCGCCAAGGG  100

seq1  TGCTGCCTCAGCGGCTCTGTGCTTCCGCCTGTCCCAGAAGCTGTCCGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTCAGCGGCTCTGTGCTTCCGCCTGTCCCAGAAGCTGTCCGGTT  150

seq1  CTCTGGCGCACCCTCTCACCTGTTCAGACTAATTTCCTAAGTTCTGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCGCACCCTCTCACCTGTTCAGACTAATTTCCTAAGTTCTGCTGA  200

seq1  GTCCCGGAACCAAGATGGCGACCGCTGCTGCTGAGGCTGAGGCCGCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCGGAACCAAGATGGCGACCGCTGCTGCTGAGGCTGAGGCCGCCTCC  250

seq1  CAAGCCAAGCGGACACCTGTCCTCTGGTCCGGACGGTGGCCGGCTGTCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAAGCGGACACCTGTCCTCTGGTCCGGACGGTGGCCGGCTGTCCG  300

seq1  ACATTGGTTATTGTTACTGCTCTATCTTCTCAAGATCAGGTGTTCCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGTTATTGTTACTGCTCTATCTTCTCAAGATCAGGTGTTCCCTGA  350

seq1  TACTCTCCTGTTACTACTCAGAAGACCCCTTCTCATCCATGTCATAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCCTGTTACTACTCAGAAGACCCCTTCTCATCCATGTCATAACTT  400

seq1  GGGTTAAAAATTTTTTCTTAGAAAAAAAAAAACCAAGCAAATCTAAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAAAATTTTTTCTTAGAAAAAAAAAAACCAAGCAAATCTAAGTGC  450

seq1  TACATTTTTTTATCCTTACATTTTACAAACTTTTTACTGGATATTCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTTTTATCCTTACATTTTACAAACTTTTTACTGGATATTCTTGG  500

seq1  AAATTAAGTTTATCCTAATGATAGGAATTC  530
      ||||||||||||||||||||||||||||||
seq2  AAATTAAGTTTATCCTAATGATAGGAATTC  530