BAC Information

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BAC

Clone NameB6Ng01-334O15
Chromosome13 (Build37)
Map Location 67,465,301 - 67,618,472
singlet/doubletdoublet
Overlap geneZfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87
Upstream geneLOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik
Downstream geneZfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334O15.bB6Ng01-334O15.g
ACCGA120299GA120300
length1,169973
definitionB6Ng01-334O15.b B6Ng01-334O15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,617,294 - 67,618,472)(67,465,301 - 67,466,268)
sequence
gaattcatactggagagaaaccctaccagtgtgaagagtgtgggaaaaca
ttctactatcgttcaaacctgaagggacatcagattattcattctggagt
gaaaccctacaagtgtgaagtatgtgggagcatgtttagaactagctcag
acctttctaagcaccagaggatccatgcggaagtgaagctgtacagttgt
gaggagtgcgggaaagccttttctactcattcgtacctcattcggcacaa
attgggccactctagagagaaaccatacaaatgcgaagagtgtggcaaaa
cattttgttatccttcaatccttaaggaacatcaacgaattcattctgga
gtgaaaccttacaattgtgaaatatgtggcagcatgtttagaactcgctc
cgaactttctaagcaccagagaatccatgctgaagtgaagctctacaact
gtgaggagtgcgggaaagccttttctactcactcctaccttatgaggcat
agacttggtcactctggagagaagccctacaaatgtgaagagtgtgggaa
atcctatagctacccttcactccttaaggaacatcaaagaattcattctc
agaatccctataagtgtgacgtgtgtgggaaggttttttgtactcgctca
ggacgttctaaacaccagagaattcacaccggagagaaaccttacaagtg
tgaagactgtgggaagggattctcgactcactcataccttactctgcaca
aattacttcataccggagagaaacctttcaaatgggaagaatgtggtgag
gttttctatacctgctgaagacttactaaacatcagaaattcacattggc
gaaaaccctacaaaggtaaagaatgtgtcaaaactctttactgtacttca
gactttaaataataccataaaaactcatactgaagagaaaccatacttta
attagggcttcgttagatacacgtacgtcctactgtagagaactttacag
atgtggagatgtggacaatatttaccgtacttcacactttaacagccagg
caaaagctcattctcagaagaatccttcaagttgtgaagtatgggacagg
attatgtgctacttggacctttctgtctacggaacatgtattctggagag
aacctctcgcaagtgtgaa
gaattctatcttgacttcagaactggcaaatgaaatagcccatgtgagag
ttacaacttttccttattaataagccaataagggtattcgtgagaaagct
tgggcttccactcagaaaggatcttaatagggaagggagtgggggtagag
ttttaaaggtcaaaaggctgcactcacatcacatgagatgtataacaaag
ggttgtgttttgtttggttgattttttgttgttgtttggtttttccctgt
acccccgcacaatggacagttttttagaaggaatcctttgtatacatata
agtcttgtctcagcaaagacaattttctttttcagagcctccctgaggag
gctccagagggtatggggtacagtgtcaggataacctggcctggcctaag
tcaccttattccccagttctattagttcttttcgaatccttgaattttat
gaaggggcaggaactgggcctttggactcatttttcttaaggcaatctaa
catttgaaaaagattaacaaccagttaattcatcagagcccagttgtaag
atccgatggagcaaaacagacaagagcaccagatttgaacaaagcctttt
tccttacatccttagcatgttatggtatgtggctcacatgcaatttactc
tgatagggtctatttcctgtcccagaggagtggtactcttgagcctgggg
ttgtcctgccgtctaaggatattgtagatttaacgccttttagttccaat
actctatttttcagaccaaaattttttaaaaatataattacagttgattt
ttaattttatgggtatattaaatacactaagttatttttatcttgtattg
aggtatgtgtttaaagatgtactttcaatagtgtaagacagaaagactaa
agattgagagatataaattggcttctccatccctaactcatcctccataa
ataaatttcactgtactcagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67617294_67618472
seq2: B6Ng01-334O15.b_48_1216 (reverse)

seq1  TTCACACTTGC-AGAGTTTCTCTCCAGGATACATGTTCTGGTAGACAGAA  49
      ||||||||||| |||| |||||||||| ||||||||||  ||||||||||
seq2  TTCACACTTGCGAGAGGTTCTCTCCAGAATACATGTTC-CGTAGACAGAA  49

seq1  AGCTCAAGGTAGCACATAATACCTTGTCCCATACTTCAC-ACTTGAAGGG  98
      || || | ||||||||||||  | ||||||||||||||| ||||||| ||
seq2  AGGTCCAAGTAGCACATAAT--CCTGTCCCATACTTCACAACTTGAA-GG  96

seq1  ATTCTTCTGAGAATGAGCCCTTTTG-CTGGCTGTTAAAGTTGTGAAGTAC  147
      |||||||||||||||||  |||||| ||||||||||||| ||||||||||
seq2  ATTCTTCTGAGAATGAG--CTTTTGCCTGGCTGTTAAAG-TGTGAAGTAC  143

seq1  GGTAAAATATTTGTCCACATTCTCCACATCTGTAAAGTTTCTCTACAGTA  197
      ||| ||||| ||||||||| ||||||||||||||||| ||||||||||||
seq2  GGT-AAATA-TTGTCCACA-TCTCCACATCTGTAAAG-TTCTCTACAGTA  189

seq1  GGACGTACCTTGTATCTAACGAAGCCCTAATTAAAGTATGGTTTCTCTTC  247
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  GGACGTA-CGTGTATCTAACGAAGCCCTAATTAAAGTATGGTTTCTCTTC  238

seq1  AGTATGAGTTTTTATGGTATTATTTAAAGTCTGAAGTACAGTAAAGAGTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAGTTTTTATGGTATTATTTAAAGTCTGAAGTACAGTAAAGAGTT  288

seq1  TTGACACATTCTTTACCTTTGTAGGGTTTTCGCCAATGTGAATTTCCTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTGACACATTCTTTACCTTTGTAGGGTTTTCGCCAATGTGAATTT-CTGA  337

seq1  TGTTTAGTAAGTCTTCAGCAGGTATAGAAAACCTCACCACATTCTTCCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGTAAGTCTTCAGCAGGTATAGAAAACCTCACCACATTCTTCCCA  387

seq1  TTTGAAAGGTTTCTCTCCGGTATGAAGTAATTTGTGCAGAGTAAGGTATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGGTTTCTCTCCGGTATGAAGTAATTTGTGCAGAGTAAGGTATG  437

seq1  AGTGAGTCGAGAATCCCTTCCCACAGTCTTCACACTTGTAAGGTTTCTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTCGAGAATCCCTTCCCACAGTCTTCACACTTGTAAGGTTTCTCT  487

seq1  CCGGTGTGAATTCTCTGGTGTTTAGAACGTCCTGAGCGAGTACAAAAAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGTGAATTCTCTGGTGTTTAGAACGTCCTGAGCGAGTACAAAAAAC  537

seq1  CTTCCCACACACGTCACACTTATAGGGATTCTGAGAATGAATTCTTTGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCACACACGTCACACTTATAGGGATTCTGAGAATGAATTCTTTGAT  587

seq1  GTTCCTTAAGGAGTGAAGGGTAGCTATAGGATTTCCCACACTCTTCACAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTAAGGAGTGAAGGGTAGCTATAGGATTTCCCACACTCTTCACAT  637

seq1  TTGTAGGGCTTCTCTCCAGAGTGACCAAGTCTATGCCTCATAAGGTAGGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGGCTTCTCTCCAGAGTGACCAAGTCTATGCCTCATAAGGTAGGA  687

seq1  GTGAGTAGAAAAGGCTTTCCCGCACTCCTCACAGTTGTAGAGCTTCACTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTAGAAAAGGCTTTCCCGCACTCCTCACAGTTGTAGAGCTTCACTT  737

seq1  CAGCATGGATTCTCTGGTGCTTAGAAAGTTCGGAGCGAGTTCTAAACATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGATTCTCTGGTGCTTAGAAAGTTCGGAGCGAGTTCTAAACATG  787

seq1  CTGCCACATATTTCACAATTGTAAGGTTTCACTCCAGAATGAATTCGTTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACATATTTCACAATTGTAAGGTTTCACTCCAGAATGAATTCGTTG  837

seq1  ATGTTCCTTAAGGATTGAAGGATAACAAAATGTTTTGCCACACTCTTCGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCTTAAGGATTGAAGGATAACAAAATGTTTTGCCACACTCTTCGC  887

seq1  ATTTGTATGGTTTCTCTCTAGAGTGGCCCAATTTGTGCCGAATGAGGTAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATGGTTTCTCTCTAGAGTGGCCCAATTTGTGCCGAATGAGGTAC  937

seq1  GAATGAGTAGAAAAGGCTTTCCCGCACTCCTCACAACTGTACAGCTTCAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTAGAAAAGGCTTTCCCGCACTCCTCACAACTGTACAGCTTCAC  987

seq1  TTCCGCATGGATCCTCTGGTGCTTAGAAAGGTCTGAGCTAGTTCTAAACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGCATGGATCCTCTGGTGCTTAGAAAGGTCTGAGCTAGTTCTAAACA  1037

seq1  TGCTCCCACATACTTCACACTTGTAGGGTTTCACTCCAGAATGAATAATC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCACATACTTCACACTTGTAGGGTTTCACTCCAGAATGAATAATC  1087

seq1  TGATGTCCCTTCAGGTTTGAACGATAGTAGAATGTTTTCCCACACTCTTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCCTTCAGGTTTGAACGATAGTAGAATGTTTTCCCACACTCTTC  1137

seq1  ACACTGGTAGGGTTTCTCTCCAGTATGAATTC  1179
      ||||||||||||||||||||||||||||||||
seq2  ACACTGGTAGGGTTTCTCTCCAGTATGAATTC  1169

seq1: chr13_67465301_67466268
seq2: B6Ng01-334O15.g_66_1038

seq1  GAATTCTATCTTGACTTCAGAACTGGCAAATGAAATAGCCCATGTGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTTGACTTCAGAACTGGCAAATGAAATAGCCCATGTGAGAG  50

seq1  TTACAACTTTTCCTTATTAATAAGCCAATAAGGGTATTCGTGAGAAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTTTTCCTTATTAATAAGCCAATAAGGGTATTCGTGAGAAAGCT  100

seq1  TGGGCTTCCACTCAGAAAGGATCTTAATAGGGAAGGGAGTGGGGGTAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTCCACTCAGAAAGGATCTTAATAGGGAAGGGAGTGGGGGTAGAG  150

seq1  TTTTAAAGGTCAAAAGGCTGCACTCACATCACATGAGATGTATAACAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGGTCAAAAGGCTGCACTCACATCACATGAGATGTATAACAAAG  200

seq1  GGTTGTGTTTTGTTTGGTTGATTTTTTGTTGTTGTTTGGTTTTTCCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGTTTTGTTTGGTTGATTTTTTGTTGTTGTTTGGTTTTTCCCTGT  250

seq1  ACCCCCGCACAATGGACAGTTTTTTAGAAGGAATCCTTTGTATACATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCGCACAATGGACAGTTTTTTAGAAGGAATCCTTTGTATACATATA  300

seq1  AGTCTTGTCTCAGCAAAGACAATTTTCTTTTTCAGAGCCTCCCTGAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGTCTCAGCAAAGACAATTTTCTTTTTCAGAGCCTCCCTGAGGAG  350

seq1  GCTCCAGAGGGTATGGGGTACAGTGTCAGGATAACCTGGCCTGGCCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGAGGGTATGGGGTACAGTGTCAGGATAACCTGGCCTGGCCTAAG  400

seq1  TCACCTTATTCCCCAGTTCTATTAGTTCTTTTCGAATCCTTGAATTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTATTCCCCAGTTCTATTAGTTCTTTTCGAATCCTTGAATTTTAT  450

seq1  GAAGGGGCAGGAACTGGGCCTTTGGACTCATTTTTCTTAAGGCAATCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGCAGGAACTGGGCCTTTGGACTCATTTTTCTTAAGGCAATCTAA  500

seq1  CATTTGAAAAAGATTAACAACCAGTTAATTCATCAGAGCCCAGTTGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAAAAAGATTAACAACCAGTTAATTCATCAGAGCCCAGTTGTAAG  550

seq1  ATCCGATGGAGCAAAACAGACAAGAGCACCAGATTTGAACAAAGCCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGATGGAGCAAAACAGACAAGAGCACCAGATTTGAACAAAGCCTTTT  600

seq1  TCCTTACATCCTTAGCATGTTATGGTATGTGGCTCACATGCAATTTACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACATCCTTAGCATGTTATGGTATGTGGCTCACATGCAATTTACTC  650

seq1  TGATAGGGTCTATTTCCTGTCCCAGAGGAGTGGTACTCTTGAGCCTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGGTCTATTTCCTGTCCCAGAGGAGTGGTACTCTTGAGCCTGGGG  700

seq1  TTGTCCTGCCGTCTAAGGATATTGTAGATTTAACGCC-TTTAGTTCCAAT  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTGTCCTGCCGTCTAAGGATATTGTAGATTTAACGCCTTTTAGTTCCAAT  750

seq1  ACTCTATTTTTCAGACCAAAA-TTTTTAAAAATATAATTACAGTTGATTT  798
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTCTATTTTTCAGACCAAAATTTTTTAAAAATATAATTACAGTTGATTT  800

seq1  TAAATTTTAT-GGTATATTAAATACACTAAGTTAATTTTAATCTTGTATT  847
      | |||||||| |||||||||||||||||||||| ||||| ||||||||||
seq2  TTAATTTTATGGGTATATTAAATACACTAAGTT-ATTTTTATCTTGTATT  849

seq1  GAGGTATGTGTTTTAAGATGTAC-TTCCATAGTGT-AGACAG-AAGACTA  894
      ||||||||||||| ||||||||| ||| ||||||| |||||| |||||||
seq2  GAGGTATGTGTTTAAAGATGTACTTTCAATAGTGTAAGACAGAAAGACTA  899

seq1  AAGATTGAGAGATATAAATTGGCCTCTCCATCCCTAACTTAT-CTCCATA  943
      ||||||||||||||||||||||| ||||||||||||||| || |||||||
seq2  AAGATTGAGAGATATAAATTGGCTTCTCCATCCCTAACTCATCCTCCATA  949

seq1  AATAAATTTCACTTGTACTTAGCAT  968
      |||||||||||| |||||| |||||
seq2  AATAAATTTCAC-TGTACTCAGCAT  973