BAC Information

Click to search

BAC

Clone NameB6Ng01-336A07
Chromosome13 (Build37)
Map Location 7,260,796 - 7,261,668
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516, LOC791083, LOC382722, Adarb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336A07.bB6Ng01-336A07.g
ACCGA121071GA121072
length873251
definitionB6Ng01-336A07.b B6Ng01-336A07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggtaaggcatgccacagatagaaatatagatatgcctctcaa
tggatagtgtttgaagtaatgacttactatgtctgtgacaggagatcctt
gtttatcataaatgtgtttaatgaataaaagattaggctataacaatttt
taattaaattatactttaaattatatatataaaacatatataatatatat
tatgtatatacatacacatattctaattacacataacatctccctaccct
cccttagcctcctttagttgctccacaatccacagtccttcaccaatcaa
gtttctatatcttttctatttttgcttattttagtttctgctttgtgaat
cattgggtttatccaagagtactcctctaggtgagggtgtcacattacct
agtgaagcgtgggtaactcaacagtggctacgtataacgaaaatgacttc
ccagaagcgctgattactattaactcccctgaggggagcaggggccccat
catgcctcccagttattttaaggagataatattaaatgttccactcatct
acacatcataaatattagctgctaacaatcacagttactattaaaagtat
tacaacatgtgataatggattttactaatcccttatctaggctcagaaat
attcattgataaattacaatgtagaactctccaattgaattagaaatttc
tttatattttcatattttaattatttgatcaatggttatcttaatgtaaa
attaggattctatttcataaaagttaatcagcaatcagtttcatgtctag
ttactaaactatctaacagatttatctaaatctgattgtgtgggaggatg
gtttatgtgtgtgtgtgtgtgtg

tttgtttagctctgtaccccagttttaaatggggctatttgatttttctg
gagtccagcttcttgacttccttgtatatattggatattagtcccctatc
ggatttaggattggtaaagatcctttcccaatctgttggtggcctttggg
aagagaggcccttggtcttgtgaagatcatatgccccactacaggggaat
gccagggccagaaagagggagtgggtgggttggggagcagggtggggggg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7260796_7261668
seq2: B6Ng01-336A07.b_49_921 (reverse)

seq1  CACACACACACACACACATAAACCATCCTCCCACACAATCAGATTTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACATAAACCATCCTCCCACACAATCAGATTTAGAT  50

seq1  AAATCTGTTAGATAGTTTAGTAACTAGACATGAAACTGATTGCTGATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTTAGATAGTTTAGTAACTAGACATGAAACTGATTGCTGATTAA  100

seq1  CTTTTATGAAATAGAATCCTAATTTTACATTAAGATAACCATTGATCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATGAAATAGAATCCTAATTTTACATTAAGATAACCATTGATCAAA  150

seq1  TAATTAAAATATGAAAATATAAAGAAATTTCTAATTCAATTGGAGAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAATATGAAAATATAAAGAAATTTCTAATTCAATTGGAGAGTTC  200

seq1  TACATTGTAATTTATCAATGAATATTTCTGAGCCTAGATAAGGGATTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGTAATTTATCAATGAATATTTCTGAGCCTAGATAAGGGATTAGT  250

seq1  AAAATCCATTATCACATGTTGTAATACTTTTAATAGTAACTGTGATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCATTATCACATGTTGTAATACTTTTAATAGTAACTGTGATTGTT  300

seq1  AGCAGCTAATATTTATGATGTGTAGATGAGTGGAACATTTAATATTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTAATATTTATGATGTGTAGATGAGTGGAACATTTAATATTATCT  350

seq1  CCTTAAAATAACTGGGAGGCATGATGGGGCCCCTGCTCCCCTCAGGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAATAACTGGGAGGCATGATGGGGCCCCTGCTCCCCTCAGGGGAG  400

seq1  TTAATAGTAATCAGCGCTTCTGGGAAGTCATTTTCGTTATACGTAGCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGTAATCAGCGCTTCTGGGAAGTCATTTTCGTTATACGTAGCCAC  450

seq1  TGTTGAGTTACCCACGCTTCACTAGGTAATGTGACACCCTCACCTAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGTTACCCACGCTTCACTAGGTAATGTGACACCCTCACCTAGAGG  500

seq1  AGTACTCTTGGATAAACCCAATGATTCACAAAGCAGAAACTAAAATAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCTTGGATAAACCCAATGATTCACAAAGCAGAAACTAAAATAAGC  550

seq1  AAAAATAGAAAAGATATAGAAACTTGATTGGTGAAGGACTGTGGATTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGAAAAGATATAGAAACTTGATTGGTGAAGGACTGTGGATTGTG  600

seq1  GAGCAACTAAAGGAGGCTAAGGGAGGGTAGGGAGATGTTATGTGTAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACTAAAGGAGGCTAAGGGAGGGTAGGGAGATGTTATGTGTAATTA  650

seq1  GAATATGTGTATGTATATACATAATATATATTATATATGTTTTATATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGTGTATGTATATACATAATATATATTATATATGTTTTATATATA  700

seq1  TAATTTAAAGTATAATTTAATTAAAAATTGTTATAGCCTAATCTTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAAGTATAATTTAATTAAAAATTGTTATAGCCTAATCTTTTATT  750

seq1  CATTAAACACATTTATGATAAACAAGGATCTCCTGTCACAGACATAGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAACACATTTATGATAAACAAGGATCTCCTGTCACAGACATAGTAA  800

seq1  GTCATTACTTCAAACACTATCCATTGAGAGGCATATCTATATTTCTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTACTTCAAACACTATCCATTGAGAGGCATATCTATATTTCTATCT  850

seq1  GTGGCATGCCTTACCAGGAATTC  873
      |||||||||||||||||||||||
seq2  GTGGCATGCCTTACCAGGAATTC  873


| Home | SequenceCutter | Blast | Download |