BAC Information

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BAC

Clone NameB6Ng01-338H18
Chromosome13 (Build37)
Map Location 80,273,787 - 80,274,116
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780
Downstream geneEG666933, Arrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338H18.bB6Ng01-338H18.g
ACCGA122773GA122774
length1,236331
definitionB6Ng01-338H18.b B6Ng01-338H18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttatatctgtaccccattttaaattgggttacttaagtt
ttttcaaatatacaatttcctgaaatctttatatattttggatattaact
tcacaggatgtagagttggtaatttcatataccattttgtaggctgatgc
tttgttcaaatggtaatgtcttttgccttacaaaaccttttcagtttcat
gaaatcccatttattacttgtcaattttagtgcctgggtatcaatagtat
gttaagaaagccttctgtgccaatgaattcaatgctattccttacattct
cctctgtcacgttcagtggatctgattttagaatgaggtctgtgatttat
gagaacttgatttttgttcagggtaatgagtatagatctattttcttcta
gatgcagatatattgtgagaaatattaacaaagaaccaccaagttccctt
gatccatctagctactctctgcccacaaactctctggtggggcaggagct
cctgatttcccttcactgtcacaccagccccacacaatgacagtccaccc
tctggtcagctaccataacacccagcaatgtggtagaaagaaaactctag
aagtttataattaacaagtcagatttatatatcaattctcaattcacaag
atgccaatacaataatttcagaaccaattgataatgataaaagctgccca
cctagattagacaagttatcccaattgttctatcctttatgatatcatat
ctacctgtggctatttaaagacacattggttcaggatcttcttgctgtct
gtctgcctcagtcttggcttcttttactctcctctgttgctctctgtcat
tgaaactcctaaatctgcctcccttttccctgtccaatcataggtctcct
gctgcactaatattttaatgtaattggacagggaaaatcctgtgacacag
atatccagtttgaccagcactatttgttgtcttttatccagtatttactt
ttgacttcattacccaatatcaactgttcttaggcatgtgatttatgtat
ggatttcaatgaagattccatgactaatatgtccatatgttctatggcca
ctacactattgttgtattactataagtttgtatacaggctaataataaac
aacaacaacaacaacaatggtgagaacttctagccaggccgtttacctgc
ctcacgcacatggttttcacacataatctctactga

accagggagtgaatttaatacagaacacaaataaatcaaactccaggaaa
acacacataaatggctgtataaaattacacttttcaagatttgaaaacta
aattgaatatatatggagtatatatggaaaatatatggagaatatttgga
atatataagaaatacatataatggaatatacaggtgtatgtatatggaat
atatagaatgtatatggaatatgtatatgtggaatatgtgtttatttatc
gagtatgtgtgtgtctgtgtgtgtgtatgtaaaaacacaatgtaaaatag
taattgaaagacagcaagaaggtatgggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80273787_80274116
seq2: B6Ng01-338H18.g_72_401

seq1  ACCAGGGAGTGAATTTAATACAGAACACAAATAAATCAAACTCCAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGAGTGAATTTAATACAGAACACAAATAAATCAAACTCCAGGAAA  50

seq1  ACACACATAAATGGCTGTATAAAATTACACTTTTCAAGATTTGAAAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATAAATGGCTGTATAAAATTACACTTTTCAAGATTTGAAAACTA  100

seq1  AATTGAATATATATGGAGTATATATGGAAAATATATGGAGAATATTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAATATATATGGAGTATATATGGAAAATATATGGAGAATATTTGGA  150

seq1  ATATATAAGAAATACATATAATGGAATATACAGGTGTATGTATATGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAGAAATACATATAATGGAATATACAGGTGTATGTATATGGAAT  200

seq1  ATATAGAATGTATATGGAATATGTATATGTGGAATATGTGTTTATATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATATAGAATGTATATGGAATATGTATATGTGGAATATGTGTTTATTTATC  250

seq1  GAGTATGTGTGTGTCTGTGTGTGTGTATGTAAAAACACAATGTAAAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGTGTGTGTCTGTGTGTGTGTATGTAAAAACACAATGTAAAATAG  300

seq1  TAATTGAAAGACAGCAAGAAGGTATGGGTG  330
      ||||||||||||||||||||||||||||||
seq2  TAATTGAAAGACAGCAAGAAGGTATGGGTG  330


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