BAC Information

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BAC

Clone NameB6Ng01-339K22
Chromosome13 (Build37)
Map Location 114,852,269 - 114,984,965
singlet/doubletdoublet
Overlap geneArl15, A430090L17Rik
Upstream geneCdc20b, Gzma, 1700084D21Rik, Gzmk, Esm1, BC067074, LOC100040888, Snag1, Hspb3, EG632832, LOC622701, LOC100040927
Downstream geneNdufs4, LOC100040958, Fst, 4930467J12Rik, Mocs2, Itga2, LOC100040975, Itga1, Pelo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339K22.bB6Ng01-339K22.g
ACCGA123608GA123609
length673469
definitionB6Ng01-339K22.b B6Ng01-339K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,984,293 - 114,984,965)(114,852,269 - 114,852,743)
sequence
gaattctttaccatgaatctagttacaaatggaagatttatgaaattggc
caaatttgaagagtgggttgctaagcagtgtgcctatttcactaaacctg
attgttttagttaatatatggaatgctatgcttaggcttgcgcctgatgt
atgtctattgctagggatagctaacagccacccaaactcacagcagccaa
tcaagcccacacgcataaggactgtggaacctgcctgggtcagaaagtct
tagctgttgaaggagagaatgttgggctacttgcatttactttcggcttg
cttcctctgtgttcaggtctcagtttgggaggcaacagagaactgcctat
ggggcaggcttctgtcattgtgtgtgcctatcgcaacactccctgcccgg
agcaccaacttcttaggattctggtgggctgccctggccgcagaagttgg
tccagtgatggacgtccacagcagcacagttcctaagttcttctcttagg
acttcccagcgaaagagttctgaattcttcagctatgcagcttatgactt
ttactcaggactggcaataaatatccacgttttcaggaccagtcttggga
ataaagttaatacagaggaagaaaggaggaagaaaggaagaagagaacga
ggaagaggagggggagggggagg
tttacacggcttaagcctgtttccatagctccagcattgtttggagacaa
acagttcgatttctaagggaattgtcaaaactcctttgaagaccttctgc
ataatcatggatctcctatatgtgtgttcgttttccaaattccctaagta
aagcccacatttacgagaactatctagccagagattacaaccagtcacac
tgggatgggattggaggaaaatgtgggataccaacttgcttgggattctc
agtcccattgataaaagaattgaagaatggactgaagcttgatgaacttt
tattatagtttaaaaggaatcacaagctgtaaatctccccccatggctgg
gggagaatggaaaagagaaggggggggcacaacgacaatgccatgtcatt
tgggttaagctggcatggaggtcagcagcatggccaaacaggagctgcgt
ggtggggaggggaagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_114984293_114984965
seq2: B6Ng01-339K22.b_54_726 (reverse)

seq1  CCTCCCCCTCCCCCTCCTCTTCCTCGTTCTCTTCTTCCTTTCTTCCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCTCCCCCTCCTCTTCCTCGTTCTCTTCTTCCTTTCTTCCTCCT  50

seq1  TTCTTCCTCTGTATTAACTTTATTCCCAAGACTGGTCCTGAAAACGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCTGTATTAACTTTATTCCCAAGACTGGTCCTGAAAACGTGGA  100

seq1  TATTTATTGCCAGTCCTGAGTAAAAGTCATAAGCTGCATAGCTGAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTGCCAGTCCTGAGTAAAAGTCATAAGCTGCATAGCTGAAGAAT  150

seq1  TCAGAACTCTTTCGCTGGGAAGTCCTAAGAGAAGAACTTAGGAACTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACTCTTTCGCTGGGAAGTCCTAAGAGAAGAACTTAGGAACTGTGC  200

seq1  TGCTGTGGACGTCCATCACTGGACCAACTTCTGCGGCCAGGGCAGCCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGGACGTCCATCACTGGACCAACTTCTGCGGCCAGGGCAGCCCAC  250

seq1  CAGAATCCTAAGAAGTTGGTGCTCCGGGCAGGGAGTGTTGCGATAGGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCTAAGAAGTTGGTGCTCCGGGCAGGGAGTGTTGCGATAGGCAC  300

seq1  ACACAATGACAGAAGCCTGCCCCATAGGCAGTTCTCTGTTGCCTCCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATGACAGAAGCCTGCCCCATAGGCAGTTCTCTGTTGCCTCCCAAA  350

seq1  CTGAGACCTGAACACAGAGGAAGCAAGCCGAAAGTAAATGCAAGTAGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACCTGAACACAGAGGAAGCAAGCCGAAAGTAAATGCAAGTAGCCC  400

seq1  AACATTCTCTCCTTCAACAGCTAAGACTTTCTGACCCAGGCAGGTTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTCTCCTTCAACAGCTAAGACTTTCTGACCCAGGCAGGTTCCAC  450

seq1  AGTCCTTATGCGTGTGGGCTTGATTGGCTGCTGTGAGTTTGGGTGGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTATGCGTGTGGGCTTGATTGGCTGCTGTGAGTTTGGGTGGCTGT  500

seq1  TAGCTATCCCTAGCAATAGACATACATCAGGCGCAAGCCTAAGCATAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATCCCTAGCAATAGACATACATCAGGCGCAAGCCTAAGCATAGCA  550

seq1  TTCCATATATTAACTAAAACAATCAGGTTTAGTGAAATAGGCACACTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATATATTAACTAAAACAATCAGGTTTAGTGAAATAGGCACACTGCT  600

seq1  TAGCAACCCACTCTTCAAATTTGGCCAATTTCATAAATCTTCCATTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACCCACTCTTCAAATTTGGCCAATTTCATAAATCTTCCATTTGTA  650

seq1  ACTAGATTCATGGTAAAGAATTC  673
      |||||||||||||||||||||||
seq2  ACTAGATTCATGGTAAAGAATTC  673

seq1: chr13_114852269_114852743
seq2: B6Ng01-339K22.g_68_542

seq1  GAATTCTTTACACGGCTTAAGCCTGTTTCCATAGCTCCAGCATTGTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACACGGCTTAAGCCTGTTTCCATAGCTCCAGCATTGTTTGG  50

seq1  AGACAAACAGTTCGATTTCTAAGGGAATTGTCAAAACTCCTTTGAAGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAACAGTTCGATTTCTAAGGGAATTGTCAAAACTCCTTTGAAGACC  100

seq1  TTCTGCATAATCATGGATCTCCTATATGTGTGTTCGTTTTCCAAATTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATAATCATGGATCTCCTATATGTGTGTTCGTTTTCCAAATTCCC  150

seq1  TAAGTAAAGCCCACATTTACGAGAACTATCTAGCCAGAGATTACAACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAAGCCCACATTTACGAGAACTATCTAGCCAGAGATTACAACCAG  200

seq1  TCACACTGGGATGGGATTGGAGGAAAATGTGGGATACCAACTTGCTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTGGGATGGGATTGGAGGAAAATGTGGGATACCAACTTGCTTGGG  250

seq1  ATTCTCAGTCCCATTGATAAAAGAATTGAAGAATGGACTGAAGCTTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGTCCCATTGATAAAAGAATTGAAGAATGGACTGAAGCTTGATG  300

seq1  AACTTTTATTATAGTTTAAAAGGAATCACAAGCTGTAAATCTCCCCCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTATTATAGTTTAAAAGGAATCACAAGCTGTAAATCTCCCCCCAT  350

seq1  GGCTGGGGGAGAATGGAAAAGAGAAGGGGGGGGCACAACGACAATGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGGGAGAATGGAAAAGAGAAGGGGGGGGCACAACGACAATGCCAT  400

seq1  GTCATTTGGGTTAAGCTGGCATGGAGGTCAGCAGCATGGCCAAACAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGGGTTAAGCTGGCATGGAGGTCAGCAGCATGGCCAAACAGGAG  450

seq1  CTGCGTGGTGGGGAGGGGAAGGGAA  475
      |||||||||||||||||||||||||
seq2  CTGCGTGGTGGGGAGGGGAAGGGAA  475