BAC Information

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BAC

Clone NameB6Ng01-339P23
Chromosome13 (Build37)
Map Location 16,129,133 - 16,129,636
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670994, EG625121, Gli3, LOC665157, Inhba
Downstream geneLOC625181, LOC665191, 5033411D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339P23.bB6Ng01-339P23.g
ACCGA123839GA123840
length1,195501
definitionB6Ng01-339P23.b B6Ng01-339P23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctacagctgataaacaacttcagaaaagtggctggatataaaat
taactgaaacaaatcagtagcctttttatactcaaaggataaaagggctg
agaaagaaattagggaaatgacagccttcacatagtcacaaacaatatca
aatatcttagtatgactctaaccaaacaagtgaaagatttgtatggcaag
aacttcaattctctgaagaaattagaaaagactttagaagatggaatgac
ctcccatgcccatgaattggtagaattaatatagtaaaaatggctacctt
tccaaaagcaatctaccgattcaatgcaatttctatcaaaattccaaatc
aattcttcatagagttagaaagagcaatttgcaaattcatttggattaac
aaaaacccaggataatgaaagctattctcaacaattaaagaacttctggg
gaaatcaccatccctgacctcaagctgtactacaatagtgataaaaactg
tatggtattggtacagtgacaggcaggtacatcagtggaatagatttgaa
ggcccagaaatgaacccccacacctttggtcacttgatctttgacaaaga
agctaaaaccactcagtaaaaaaaagatggcatttttaacaaactggcag
tcaacatgtagaaaaatgtaaattgatccattattatctccctgtacaaa
gctcaagtccataaaaccagatacagtgaatctaatagaagagaaagtgg
gggaaatccttgaacacatgggcacaggggcaaagttcctgaacagaaca
ccaatggcttatgctctaagatcaacaatagacaaatgggacctcataaa
attgcaaaggttctgtaaggcaaaggacactgtcaatatggcaaaatggc
aaccaactgattgggaaaagatctttaccaatcctatatcctatacaggg
ctaggatcaattttatacaaaagaattcaagaagttagattccagagaac
caaataactcttattaaaaaatgagaacaaaagttagcctatgttggcca
gtgagacagtgtaagattagaaaaagcatgttatactaactttggctgtc
cagaatgccaattaatggccattcctatttggcatatgtaccatagtcca
cattgttacaccacccttaagttagtttggcaacctacctctata

agtcactaatagagtaagacaggtatcagtttttctaaggggtccacctt
cacattcttatgaaccaaaagtttaacttcatagaggttttccagtatat
tgacttgttaaagaatcttaaaagtgtgaaatgttgagtcactgttccaa
aaatgtcacaaaataaatattttctgatcttactctgagcatgttgcttc
aaaactcctggcaggtgaagaattagaacatttttagtgatgtttacagg
tgattattatatggacataggaaatgactggggcagagcaccacactcca
tttgaaatttctctcttggcttcagtattaaaagagaaaatccagtagta
acatgaagactgatagaacataacaatagaaggagaagaggaagaggaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaaagaggaggaggaggagg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_16129133_16129636
seq2: B6Ng01-339P23.g_66_572 (reverse)

seq1  TCCTCCTCCTCCTCCTCT---TTCTTCTTCTTCTTCTTCTTCTTCTTCTT  47
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTCCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  50

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  100

seq1  TCTTCCTCTTCCTCTTCTCCTTCTATTGTTATGTTCTATCAGTCTTCATG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTTCCTCTTCTCCTTCTATTGTTATGTTCTATCAGTCTTCATG  150

seq1  TTACTACTGGATTTTCTCTTTTAATACTGAAGCCAAGAGAGAAATTTCAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACTGGATTTTCTCTTTTAATACTGAAGCCAAGAGAGAAATTTCAA  200

seq1  ATGGAGTGTGGTGCTCTGCCCCAGTCATTTCCTATGTCCATATAATAATC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTGTGGTGCTCTGCCCCAGTCATTTCCTATGTCCATATAATAATC  250

seq1  ACCTGTAAACATCACTAAAAATGTTCTAATTCTTCACCTGCCAGGAGTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAAACATCACTAAAAATGTTCTAATTCTTCACCTGCCAGGAGTTT  300

seq1  TGAAGCAACATGCTCAGAGTAAGATCAGAAAATATTTATTTTGTGACATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAACATGCTCAGAGTAAGATCAGAAAATATTTATTTTGTGACATT  350

seq1  TTTGGAACAGTGACTCAACATTTCACACTTTTAAGATTCTTTAACAAGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAACAGTGACTCAACATTTCACACTTTTAAGATTCTTTAACAAGTC  400

seq1  AATATACTGGAAAACCTCTATGAAGTTAAACTTTTGGTTCATAAGAATGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTGGAAAACCTCTATGAAGTTAAACTTTTGGTTCATAAGAATGT  450

seq1  GAAGGTGGACCCCTTAGAAAAACTGATACCTGTCTTACTCTATTAGTGAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGGACCCCTTAGAAAAACTGATACCTGTCTTACTCTATTAGTGAC  500

seq1  TGAATTC  504
      |||||||
seq2  TGAATTC  507


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