BAC Information

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BAC

Clone NameB6Ng01-343I14
Chromosome13 (Build37)
Map Location 7,140,815 - 7,238,739
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516, LOC791083, LOC382722, Adarb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343I14.bB6Ng01-343I14.g
ACCGA126287GA126288
length6561,091
definitionB6Ng01-343I14.b B6Ng01-343I14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,238,084 - 7,238,739)(7,140,815 - 7,141,913)
sequence
gaattcactatttaagccaggctggcctcagacacatagagatccacatg
ttttcgactcataaatactgagatcagatgtgtgccccacagtgaccaac
cagtcttcagattttggcacaggtatgttcaagattcaggtattttttgt
gttcccacaagcaaagatcccacacattcctgcaatttcaaaagttgtaa
ctttatgtgttcaaggtgaatattgtattgaaaggcctgaaaataaagct
aaatcatccccaaaagtacaaaataataaaaccaacaaaacaaaaaatcc
aaaattattaaataaactgaattaaatttaaaataacattcatatttaca
atgaactataatgaaatctagtgttatgaagtaaataatttattacttat
tataataagaatatacacatttttaaaggatgcaaaatacatcctttatt
tacaatgttgaaaatataattctcagaaaagaaaggtgaaacaacaatat
gaactaaccagtacccccagagcttctgcatatgtagcagaagatggcct
agtcgaccatcattgggaaaagaggccccttggtcttccaaactttatat
gccccagtacaagggaacgccagggccaagaagtgggagtgggtgggtag
gggagt

gaattcaacaggaagaatgtgcagtgccaacagaccttcagaggacaagg
caccagcatctactggctgtcataccagtacatacgaacagtgggcttct
gtgccaagagatgtctgttgagtgtaatttagttctactagagttgcaca
aatttattttcccactagcgtcatctaaaatcttatatttagcctaataa
gatttattgatgtatttatatgtgtatgtgtgtgtctgtgttacacctgt
gcccatccccacacgttttgagagttggttctctctttccaccatcatgt
gtccaatcaaactcaggggctctgtgttggtaagaggctcctttacatac
caagtcatcttgcagacaaagagttacaataaaattaaggatgatataaa
ctgatgtaaaatgtatattcttaaaatgatagcttggttgaattattatt
tatatctaaaagacagcacttagagatgacaaaatttacataaacaaatc
aactgagcaacaaaaatataaactaatggaatggttaaccttaagaaaaa
aaataaaattgcatgtaaactcactctgtaccaataaaaattataaaata
cagtaagagaatctggaaggatgtgaacagttctctacagacaattctga
atcattcttgtaatacacagtgacatttgcagactcctgcaaaaatgcct
tctttatggaccgttaacaagctatatgttgatttccccaataagatatg
ttgctaaatagtcttaattaagataaagtcaaatgatctttatctttctt
gaaaaaaaatcacccataagttcacgtaatttatttttgctcagaacaag
atatttaaaacattctcaaggacattatgtcttccggctttaaaatatca
agtaattatcaaatcaatgatcgtttgggggaaagtaatgaagtatggga
aataaccacttcaaattatataaatcattaaagctgatgtcattaggaag
gcgttttagagtgagagtgtaaatgtcttcaagttggataaaaaaactga
gttatatcaaagtaaatagaagatttatttctctttttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7238084_7238739
seq2: B6Ng01-343I14.b_44_699 (reverse)

seq1  ACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTCCCTTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTTCCCTTGTAC  50

seq1  TGGGGCATATAAAGTTTGGAAGACCAAGGGGCCTCTTTTCCCAATGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATATAAAGTTTGGAAGACCAAGGGGCCTCTTTTCCCAATGATGG  100

seq1  TCGACTAGGCCATCTTCTGCTACATATGCAGAAGCTCTGGGGGTACTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTAGGCCATCTTCTGCTACATATGCAGAAGCTCTGGGGGTACTGGT  150

seq1  TAGTTCATATTGTTGTTTCACCTTTCTTTTCTGAGAATTATATTTTCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATATTGTTGTTTCACCTTTCTTTTCTGAGAATTATATTTTCAAC  200

seq1  ATTGTAAATAAAGGATGTATTTTGCATCCTTTAAAAATGTGTATATTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAATAAAGGATGTATTTTGCATCCTTTAAAAATGTGTATATTCTT  250

seq1  ATTATAATAAGTAATAAATTATTTACTTCATAACACTAGATTTCATTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATAAGTAATAAATTATTTACTTCATAACACTAGATTTCATTATA  300

seq1  GTTCATTGTAAATATGAATGTTATTTTAAATTTAATTCAGTTTATTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGTAAATATGAATGTTATTTTAAATTTAATTCAGTTTATTTAAT  350

seq1  AATTTTGGATTTTTTGTTTTGTTGGTTTTATTATTTTGTACTTTTGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGGATTTTTTGTTTTGTTGGTTTTATTATTTTGTACTTTTGGGGA  400

seq1  TGATTTAGCTTTATTTTCAGGCCTTTCAATACAATATTCACCTTGAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAGCTTTATTTTCAGGCCTTTCAATACAATATTCACCTTGAACAC  450

seq1  ATAAAGTTACAACTTTTGAAATTGCAGGAATGTGTGGGATCTTTGCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTACAACTTTTGAAATTGCAGGAATGTGTGGGATCTTTGCTTGT  500

seq1  GGGAACACAAAAAATACCTGAATCTTGAACATACCTGTGCCAAAATCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACACAAAAAATACCTGAATCTTGAACATACCTGTGCCAAAATCTGA  550

seq1  AGACTGGTTGGTCACTGTGGGGCACACATCTGATCTCAGTATTTATGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGTTGGTCACTGTGGGGCACACATCTGATCTCAGTATTTATGAGT  600

seq1  CGAAAACATGTGGATCTCTATGTGTCTGAGGCCAGCCTGGCTTAAATAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAACATGTGGATCTCTATGTGTCTGAGGCCAGCCTGGCTTAAATAGT  650

seq1  GAATTC  656
      ||||||
seq2  GAATTC  656


seq1: chr13_7140815_7141913
seq2: B6Ng01-343I14.g_65_1155

seq1  GAATTCAACAGGAAGAATGTGCAGTGCCAACAGACCTTCAGAGGACAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGGAAGAATGTGCAGTGCCAACAGACCTTCAGAGGACAAGG  50

seq1  CACCAGCATCTACTGGCTGTCATACCAGTACATACGAACAGTGGGCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCATCTACTGGCTGTCATACCAGTACATACGAACAGTGGGCTTCT  100

seq1  GTGCCAAGAGATGTCTGTTGAGTGTAATTTAGTTCTACTAGAGTTGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAGAGATGTCTGTTGAGTGTAATTTAGTTCTACTAGAGTTGCACA  150

seq1  AATTTATTTTCCCACTAGCGTCATCTAAAATCTTATATTTAGCCTAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTTCCCACTAGCGTCATCTAAAATCTTATATTTAGCCTAATAA  200

seq1  GATTTATTGATGTATTTATATGTGTATGTGTGTGTCTGTGTTACACCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTGATGTATTTATATGTGTATGTGTGTGTCTGTGTTACACCTGT  250

seq1  GCCCATCCCCACACGTTTTGAGAGTTGGTTCTCTCTTTCCACCATCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCCCCACACGTTTTGAGAGTTGGTTCTCTCTTTCCACCATCATGT  300

seq1  GTCCAATCAAACTCAGGGGCTCTGTGTTGGTAAGAGGCTCCTTTACATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATCAAACTCAGGGGCTCTGTGTTGGTAAGAGGCTCCTTTACATAC  350

seq1  CAAGTCATCTTGCAGACAAAGAGTTACAATAAAATTAAGGATGATATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCATCTTGCAGACAAAGAGTTACAATAAAATTAAGGATGATATAAA  400

seq1  CTGATGTAAAATGTATATTCTTAAAATGATAGCTTGGTTGAATTATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTAAAATGTATATTCTTAAAATGATAGCTTGGTTGAATTATTATT  450

seq1  TATATCTAAAAGACAGCACTTAGAGATGACAAAATTTACATAAACAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTAAAAGACAGCACTTAGAGATGACAAAATTTACATAAACAAATC  500

seq1  AACTGAGCAACAAAAATATAAACTAATGGAATGGTTAACCTTAAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGCAACAAAAATATAAACTAATGGAATGGTTAACCTTAAGAAAAA  550

seq1  AAATAAAATTGCATGTAAACTCACTCTGTACCAATAAAAATTATAAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATTGCATGTAAACTCACTCTGTACCAATAAAAATTATAAAATA  600

seq1  CAGTAAGAGAATCTGGAAGGATGTGAACAGTTCTCTACAGACAATTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGAGAATCTGGAAGGATGTGAACAGTTCTCTACAGACAATTCTGA  650

seq1  ATCATTCTTGTAATACACAGTGACATTTGCAGACTCCTGCAAAAATGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTTGTAATACACAGTGACATTTGCAGACTCCTGCAAAAATGCCT  700

seq1  TCTTTATGGACCGTTAACAAGCTATATGTTGATTTCCCCAATAAGATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATGGACCGTTAACAAGCTATATGTTGATTTCCCCAATAAGATATG  750

seq1  TTGCTAAATAGTCTTAATTAAGATAAAGTCAAATGATCTTTATCTTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAATAGTCTTAATTAAGATAAAGTCAAATGATCTTTATCTTTCTT  800

seq1  GAAAAAAAATCACCCATAAGTTCACGTAATTTATTTTTGCTCAGAACAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAATCACCCATAAGTTCACGTAATTTATTTTTGCTCAGAACAAG  850

seq1  ATATTTAAAACATTCTCAAGGACATTATGTCTTCCGGCTTTAAAATATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAAACATTCTCAAGGACATTATGTCTTCCGGCTTTAAAATATCA  900

seq1  AGTAATTATCAAATCAATGATCGTTTGGGGGAAAGTAATGAAGTATGGAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTAATTATCAAATCAATGATCGTTTGGGGGAAAGTAATGAAGTATGGGA  950

seq1  AATAACCACTTCAAATTATATAAATCATTAAAGCTGATGTCATTAGGAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCACTTCAAATTATATAAATCATTAAAGCTGATGTCATTAGGAAG  1000

seq1  GCGTTTTAAGAGTGAGAGTGTTAAATGTCTTCAAAGTTGGAT-AAAAAAC  1049
      ||||||| |||||||||||| ||||||||||| ||||||||| |||||||
seq2  GCGTTTT-AGAGTGAGAGTG-TAAATGTCTTC-AAGTTGGATAAAAAAAC  1047

seq1  TGAAGTTATATTCAAAAGTAAAATTAAGAAGATATATTTCTCTTTTTATA  1099
      || ||||||||   ||||||||    ||||||| ||||||||||||||||
seq2  TG-AGTTATAT--CAAAGTAAA---TAGAAGATTTATTTCTCTTTTTATA  1091


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