BAC Information

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BAC

Clone NameB6Ng01-344L02
Chromosome13 (Build37)
Map Location 67,494,569 - 67,641,334
singlet/doubletdoublet
Overlap gene2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748
Upstream gene2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456
Downstream geneA530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344L02.bB6Ng01-344L02.g
ACCGA127111GA127112
length1,1621,097
definitionB6Ng01-344L02.b B6Ng01-344L02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,640,156 - 67,641,334)(67,494,569 - 67,495,672)
sequence
gaattcttaacaatgtgaagaatggcaaaatgttttctatcctccaaacc
ttaagcctttggagggaaaccattctcacgtgtggactgtagcaaggtct
tttgtactcacttaggactttctaaacatcaaaagaaccatactggtaag
aaagaccacaaatgtaggaaagctactaaactttttaaccttactcacca
cgaggtagttctttctgttcagaaacactatagaagaggaaatgctggaa
aattctttactctttttcaatccttaaagaatatcacagaggtcattctc
aggagagaccctacaagtatgaggattgtacttttggttattcagatctt
atccaacacaattggatccatactaaaaagaaaccaaacctttgtgaaga
atgtgacaagtgctttactaatcaacactttctaaccttaaaatttattc
tggggagaaacactacaaatgtgaacaaattgacaaggcttttaaatgtt
cttcatagattaacacaaaagtattggtactggtaaaatgtattatgaag
atttcattcatcattcagtatttgctgaatgtcagaatattcacacttgg
gagaatctctataaatgtgcaaaatatagccaggtgtttagctgtaattt
gtcactgcattagcatgagagaattaatactccaaaaatacaaagaatat
agcaaggcctttacccgttttttcatactttatcctcagaaacttcatac
tgtagagaaactgcacatacaaataacatgtcaaacttttaataatattt
caaatctcagtcaacaccaaagaatgaattcagtaagcttcactgtttga
ctttacatctcggcatctaaaggaaagctcaaccgtatgcttgtttgaat
cggactaacttacagatgtgtctataggacatttttcttggatgttgatt
gatgcccagtctcacccctggactggtggtcctgagtgaatgagattctg
gccaccaaaatcagaggagcaagcagtaagcagaattctcaatggtttct
accttagtctgtctcaagtttttcctgaagtctcattctgctgaactggt
tgactaactgtatctaaaccttgaaataacctttcctctttaagtattct
agtcatggcatt
gaattcatatttgaaattatacctctaataaaaagattaaattatttaaa
ataatgctcatcatataaataaagagggggacaaatgtacaaaaccatga
ggctaggtcacattaggtcagactaagaaacataggcattataggaaaag
agatttaaagaaaatacagtcagtggtcaaatttatttatgttcctaagt
tataaacttctattcaggttagaaaacacttctgacttaaagatgtctat
ctagtcactatgtcttcactaactttcttaaactttaagtacatggaaaa
tggtgtcatgccaagaaatgataattacttatatgccttttcattcttgg
aaaggccagacatactattgtcttttctgtatttttcctgatgaaatgaa
acaaggcacagagactgtctggaggactgacctggactgtggaaaggggc
accacaaagagatcaggacagtgaggcccccagctcctccagggtgtatt
tatgttcaagtttactaagagataagaggtttgcagttcagaaactgtaa
tttttttattaatttaatttttatttcacatgtattggtgttttgctaaa
tgcgtgtctgcatatatgtctgtgtgatggtgtcagatctcctggatttg
aagttacaaacacttgtgagctgccatgtggacgctggcaactgaactct
tcctcgggagttcaccagtgatcttaactggtgagccatttctcaagtcc
caacaattgtaatttttgaggctgaaaattttaatagagataatttcttt
catttattaaaattttaatctgatgagagtcactaatccactgtaagtgc
cacagaaaatatatttaagccatatctggtaatgatgatccacttaatga
gtgacagtcaatgtgcccaaattgtgtttggattcatgctgaattcaaat
gtatttcattcatagagacatactgaagtaagtgactaataccaatgttc
cattatacagtctctgtacatgtcaaagtttagcctaaacagagctcaaa
caaattatagtcaccttaaaggtaactcagtatgcaataatatcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67640156_67641334
seq2: B6Ng01-344L02.b_46_1207 (reverse)

seq1  AATGCCATGACTAAGAAATAACTTAAAAGAGGAAAGGGTTTATTTCA--G  48
      |||||||||||| ||||   |||| ||||||||||||  ||||||||  |
seq2  AATGCCATGACT-AGAA--TACTT-AAAGAGGAAAGG--TTATTTCAAGG  44

seq1  TTTAGGAATTACAGTTAGTCAACCAGTTCAGCCAGGATGAGAACTCAAGG  98
      |||||    |||||||||||||||||||||| ||| ||||||  |||  |
seq2  TTTAG---ATACAGTTAGTCAACCAGTTCAG-CAGAATGAGACTTCA--G  88

seq1  GAAAAACCTTGAGACAGGAACTAAAGTAGAAACCATTGAGGAATTCTGCT  148
      |||||| ||||||||||  ||||| |||||||||||||| ||||||||||
seq2  GAAAAA-CTTGAGACAG--ACTAAGGTAGAAACCATTGA-GAATTCTGCT  134

seq1  TACTGGCTTGCTCCCTCTGATTTTTGGTGGCCAGAATTCTCATTCACTCA  198
      |||| ||||||| ||||||| ||||||||||||||| |||||||||||||
seq2  TACT-GCTTGCT-CCTCTGA-TTTTGGTGGCCAGAA-TCTCATTCACTCA  180

seq1  GGACCACCAGTCCAGGGGTGAGACTGGGCATCAATCAACATCCAAGAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCACCAGTCCAGGGGTGAGACTGGGCATCAATCAACATCCAAGAAAA  230

seq1  ATGTCCTATAGACACATCTGTAAGTTAGTCCGATTCAAACAAGCATACGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTATAGACACATCTGTAAGTTAGTCCGATTCAAACAAGCATACGG  280

seq1  TTGAGCTTTCC-TTAGATGCCGAGATGTAAAGTCAAACAGTGAAGCTTAC  347
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTTTCCTTTAGATGCCGAGATGTAAAGTCAAACAGTGAAGCTTAC  330

seq1  TGAATTCATTCTTTGGTGTTGACTGAGATTTGAAATATTATTAAAAGTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCATTCTTTGGTGTTGACTGAGATTTGAAATATTATTAAAAGTTT  380

seq1  GACATGTTATTTGTATGTGCAGTTTCTCTACAGTATGAAGTTTCTGAGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTATTTGTATGTGCAGTTTCTCTACAGTATGAAGTTTCTGAGGA  430

seq1  TAAAGTATGAAAAAACGGGTAAAGGCCTTGCTATATTCTTTGTATTTTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATGAAAAAACGGGTAAAGGCCTTGCTATATTCTTTGTATTTTTG  480

seq1  GAGTATTAATTCTCTCATGCTAATGCAGTGACAAATTACAGCTAAACACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTAATTCTCTCATGCTAATGCAGTGACAAATTACAGCTAAACACC  530

seq1  TGGCTATATTTTGCACATTTATAGAGATTCTCCCAAGTGTGAATATTCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATATTTTGCACATTTATAGAGATTCTCCCAAGTGTGAATATTCTG  580

seq1  ACATTCAGCAAATACTGAATGATGAATGAAATCTTCATAATACATTTTAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAGCAAATACTGAATGATGAATGAAATCTTCATAATACATTTTAC  630

seq1  CAGTACCAATACTTTTGTGTTAATCTATGAAGAACATTTAAAAGCCTTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCAATACTTTTGTGTTAATCTATGAAGAACATTTAAAAGCCTTGT  680

seq1  CAATTTGTTCACATTTGTAGTGTTTCTCCCCAGAATAAATTTTAAGGTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTTCACATTTGTAGTGTTTCTCCCCAGAATAAATTTTAAGGTTA  730

seq1  GAAAGTGTTGATTAGTAAAGCACTTGTCACATTCTTCACAAAGGTTTGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTTGATTAGTAAAGCACTTGTCACATTCTTCACAAAGGTTTGGT  780

seq1  TTCTTTTTAGTATGGATCCAATTGTGTTGGATAAGATCTGAATAACCAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAGTATGGATCCAATTGTGTTGGATAAGATCTGAATAACCAAA  830

seq1  AGTACAATCCTCATACTTGTAGGGTCTCTCCTGAGAATGACCTCTGTGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAATCCTCATACTTGTAGGGTCTCTCCTGAGAATGACCTCTGTGAT  880

seq1  ATTCTTTAAGGATTGAAAAAGAGTAAAGAATTTTCCAGCATTTCCTCTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTAAGGATTGAAAAAGAGTAAAGAATTTTCCAGCATTTCCTCTTC  930

seq1  TATAGTGTTTCTGAACAGAAAGAACTACCTCGTGGTGAGTAAGGTTAAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGTTTCTGAACAGAAAGAACTACCTCGTGGTGAGTAAGGTTAAAA  980

seq1  AGTTTAGTAGCTTTCCTACATTTGTGGTCTTTCTTACCAGTATGGTTCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGTAGCTTTCCTACATTTGTGGTCTTTCTTACCAGTATGGTTCTT  1030

seq1  TTGATGTTTAGAAAGTCCTAAGTGAGTACAAAAGACCTTGCTACAGTCCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTTTAGAAAGTCCTAAGTGAGTACAAAAGACCTTGCTACAGTCCA  1080

seq1  CACGTGAGAATGGTTTCCCTCCAAAGGCTTAAGGTTTGGAGGATAGAAAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGAGAATGGTTTCCCTCCAAAGGCTTAAGGTTTGGAGGATAGAAAA  1130

seq1  CATTTTGCCATTCTTCACATTGTTAAGAATTC  1179
      ||||||||||||||||||||||||||||||||
seq2  CATTTTGCCATTCTTCACATTGTTAAGAATTC  1162

seq1: chr13_67494569_67495672
seq2: B6Ng01-344L02.g_66_1162

seq1  GAATTCATATTTGAAATTATACCTCTAATAAAAAGATTAAATTATTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTGAAATTATACCTCTAATAAAAAGATTAAATTATTTAAA  50

seq1  ATAATGCTCATCATATAAATAAAGAGGGGGACAAATGTACAAAACCATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCTCATCATATAAATAAAGAGGGGGACAAATGTACAAAACCATGA  100

seq1  GGCTAGGTCACATTAGGTCAGACTAAGAAACATAGGCATTATAGGAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGTCACATTAGGTCAGACTAAGAAACATAGGCATTATAGGAAAAG  150

seq1  AGATTTAAAGAAAATACAGTCAGTGGTCAAATTTATTTATGTTCCTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAAGAAAATACAGTCAGTGGTCAAATTTATTTATGTTCCTAAGT  200

seq1  TATAAACTTCTATTCAGGTTAGAAAACACTTCTGACTTAAAGATGTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTTCTATTCAGGTTAGAAAACACTTCTGACTTAAAGATGTCTAT  250

seq1  CTAGTCACTATGTCTTCACTAACTTTCTTAAACTTTAAGTACATGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCACTATGTCTTCACTAACTTTCTTAAACTTTAAGTACATGGAAAA  300

seq1  TGGTGTCATGCCAAGAAATGATAATTACTTATATGCCTTTTCATTCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCATGCCAAGAAATGATAATTACTTATATGCCTTTTCATTCTTGG  350

seq1  AAAGGCCAGACATACTATTGTCTTTTCTGTATTTTTCCTGATGAAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCAGACATACTATTGTCTTTTCTGTATTTTTCCTGATGAAATGAA  400

seq1  ACAAGGCACAGAGACTGTCTGGAGGACTGACCTGGACTGTGGAAAGGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCACAGAGACTGTCTGGAGGACTGACCTGGACTGTGGAAAGGGGC  450

seq1  ACCACAAAGAGATCAGGACAGTGAGGCCCCCAGCTCCTCCAGGGTGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAAGAGATCAGGACAGTGAGGCCCCCAGCTCCTCCAGGGTGTATT  500

seq1  TATGTTCAAGTTTACTAAGAGATAAGAGGTTTGCAGTTCAGAAACTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCAAGTTTACTAAGAGATAAGAGGTTTGCAGTTCAGAAACTGTAA  550

seq1  TTTTTTTATTAATTTAATTTTTATTTCACATGTATTGGTGTTTTGCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTAATTTAATTTTTATTTCACATGTATTGGTGTTTTGCTAAA  600

seq1  TGCGTGTCTGCATATATGTCTGTGTGATGGTGTCAGATCTCCTGGATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGTCTGCATATATGTCTGTGTGATGGTGTCAGATCTCCTGGATTTG  650

seq1  AAGTTACAAACACTTGTGAGCTGCCATGTGGACGCTGGCAACTGAACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACAAACACTTGTGAGCTGCCATGTGGACGCTGGCAACTGAACTCT  700

seq1  TCCTCGGGAGTTCACCAGTGATCTTAACTGGTGAGCCATTTCTCAAGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGGGAGTTCACCAGTGATCTTAACTGGTGAGCCATTTCTCAAGTCC  750

seq1  CAACAATTGTAATTTTTGAGGCTGAAAATTTTAATAGAGATAATTTCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATTGTAATTTTTGAGGCTGAAAATTTTAATAGAGATAATTTCTTT  800

seq1  CATTTATTAAAATTTTAATCTGATGAGAGTCACTAATCCACTGTAAGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTAAAATTTTAATCTGATGAGAGTCACTAATCCACTGTAAGTGC  850

seq1  CACAGAAAATATATTTAAGCCATATCTGGTAATGATGATCCACTTAATGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAATATATTTAAGCCATATCTGGTAATGATGATCCACTTAATGA  900

seq1  GTGACAGTCAATGTGCCCAAATTGTGTTTGGATTCATGCTGAATTCAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGTCAATGTGCCCAAATTGTGTTTGGATTCATGCTGAATTCAAAT  950

seq1  GTAATTCATTCATAGAGACAATACTGAAGTAAGTGACTAATACCAATGTT  1000
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTATTTCATTCATAGAGAC-ATACTGAAGTAAGTGACTAATACCAATGTT  999

seq1  CCATTATACAGTCCTCTGTACATGTCAAAGTTTAGCCTAAAACAGGGAGC  1050
      |||||||||||| ||||||||||||||||||||||||| |||||  ||||
seq2  CCATTATACAGT-CTCTGTACATGTCAAAGTTTAGCCT-AAACA--GAGC  1045

seq1  TCAAACAAATTTATAGTCACCTTAAAGTTTACTCAGTATGGCATAATATT  1100
      ||||||||| ||||||||||||||||| | ||||||||||  |||||| |
seq2  TCAAACAAA-TTATAGTCACCTTAAAGGTAACTCAGTATGCAATAATA-T  1093

seq1  CAAA  1104
      ||||
seq2  CAAA  1097