BAC Information

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BAC

Clone NameB6Ng01-345A02
Chromosome13 (Build37)
Map Location 62,386,244 - 62,386,817
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435362, Cts7, Cts7-ps, EG624056, LOC665717, Ctsm, Cts3, EG665401, LOC624140, EG623505, LOC665415, LOC673332, BC052688, EG638502, LOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430
Downstream geneLOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978, EG435366, LOC380850, LOC630951, Fbp2, Fbp1, LOC100042090, EG665524, 2010111I01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345A02.bB6Ng01-345A02.g
ACCGA127342GA127343
length833960
definitionB6Ng01-345A02.b B6Ng01-345A02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaataccgaatggctgagaatcacctgaaaaaaaa
tgttcagtatcctttcttttcttgttttttttttttttccaagacttggt
ttctctgtgtagctctggctgtcctggaactcactctgcagaccaggctg
gcctcgaactcagaaatctgcctgcctctgtctcccaggtgctgggatta
aaggcgtgagccaccactgcctggcctgttgttcaacttccttaatcatc
agggaaatgcaaatcaaaacaaccttgagattccacctcacacctgtcag
aatggttaagaccactttacatttcaatattagttccctctcccttatat
ctccactactccttcccctgttcccccttctcttctctgaaaagggagcc
ttccctgtgtatgacttccaactaccctatccacctccacccagtcctct
aatctgcaaatattcacacatcagtcactgcaggactagacacaccctct
ctcactgagttcagacagtactgcttagttaggggaattggatcgtctgg
cagtcaacatattcagggaaagaccccttccatttgttagtggacccata
taaggaccaagctgtacttctgtctggtatatatgtgctggttgtggggt
ttggagtggggaggaacgcagctagcttcagttttatgctcattcttcgc
ctggtggttaattttcttaaaacccacaagggtgccaggtttatttggtt
ctgccaatttaggcttcattggattggcagcgaaagattctcgaattccc
gggccccatgtaccaaaatgaaagaacctcgag
gaattctgtggaatgtgtcttgtgtattctgtataggtttttgtttcttt
ttggctaatatccagttatttttgtttaagatttatttatttatttattc
atttatttatatgtaagtacactgtagctatcctcagatactccagaaga
ggacatcagatttcattacagatggttgtgagccaccatgtggttgctga
gatttgaacttgggaccttaggaagagcagtagatgctcttaaccactga
gccatctcgccagcccctaatatccagttattaatgagtacatacaatgc
atgtccttttgggtgtgagttacctcactcaaaatgatattttctagatc
catccatttgcctgcaaaactcaggatgtcctagttcttaatagctgagt
agtattccattgtgtaaatgaaccaccttttctgtatccattcttctgtc
atgggacatctagattgtttccagcttttggctatcacaaataagacagc
tatgaacatagtggaacacctgcccctttggcatggtggggggcatcttt
tgggtgtattcccaagagtgttatagctgggtcttcaggtagatctattt
ccaattttctgaggaacctccagattgatttccagagtggttgtaccagt
ttgacatctcaccaataatggaggaatgttcctctttatccacgtcctct
ccaatatgtgttgtcacctgaggttttgatcttagccattctgactggtg
tttggtgaaatcttaggttccttttggcacttctctgatcactaagtact
ttgaacatttctttaggtgtttctcagccattcgagattcctcagttgtg
aattcttgggtttagttctataccccatattttgattgggttgtttggtt
ttttgggtaattttctccttgagtttgttatatattttagattattagcc
ctctatcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_62386244_62386817
seq2: B6Ng01-345A02.b_299_878

seq1  GAAATGCAAATCAAAACAACCTTGAGATTCCACCTCACACCTGTCAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCAAATCAAAACAACCTTGAGATTCCACCTCACACCTGTCAGAAT  50

seq1  GGTTAAGACCACTTTACATTTCAATATTAGTTCCCTCTCCCTTATATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGACCACTTTACATTTCAATATTAGTTCCCTCTCCCTTATATCTC  100

seq1  CACTACTCCTTCCCCTGTTCCCCCTTCTCTTCTCTGAAAAGGGAGCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTCCTTCCCCTGTTCCCCCTTCTCTTCTCTGAAAAGGGAGCCTTC  150

seq1  CCTGTGTATGACTTCCAACTACCCTATCCACCTCCACCCAGTCCTCTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATGACTTCCAACTACCCTATCCACCTCCACCCAGTCCTCTAAT  200

seq1  CTGCAAATATTCACACATCAGTCACTGCAGGACTAGACACACCCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAATATTCACACATCAGTCACTGCAGGACTAGACACACCCTCTCTC  250

seq1  ACTGAGTTCAGACAGTACTGCTTAGTTAGGGGAATTGGATCGTCTGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTCAGACAGTACTGCTTAGTTAGGGGAATTGGATCGTCTGGCAG  300

seq1  TCAACATATTCAGGGAAAGACCCCTTCCATTTGTTAGTGGACCCATATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATATTCAGGGAAAGACCCCTTCCATTTGTTAGTGGACCCATATAA  350

seq1  GGACCAAGCTGTACTTCTGTCTGGTATATATGTGCTGGTTGTGGGGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAAGCTGTACTTCTGTCTGGTATATATGTGCTGGTTGTGGGGTTTG  400

seq1  GAGTGGGGAGGAGCGCAGCTAGCTTCAG-TTTATGCTCATTCTTCGCCTG  449
      |||||||||||| ||||||||||||||| |||||||||||||||||||||
seq2  GAGTGGGGAGGAACGCAGCTAGCTTCAGTTTTATGCTCATTCTTCGCCTG  450

seq1  GTGGTTAATTTTCTTAAAACCCACAA-GGTGCCAGG-TTAGTTGGTTCTG  497
      |||||||||||||||||||||||||| ||||||||| ||| |||||||||
seq2  GTGGTTAATTTTCTTAAAACCCACAAGGGTGCCAGGTTTATTTGGTTCTG  500

seq1  CCAATTTAGGCTTCATTGGATTGGCAGTGAAAGATTCTCGAATTCCCGG-  546
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  CCAATTTAGGCTTCATTGGATTGGCAGCGAAAGATTCTCGAATTCCCGGG  550

seq1  -CCCATGTACC-AAATGAAAGACCCTCGAG  574
       |||||||||| |||||||||| |||||||
seq2  CCCCATGTACCAAAATGAAAGAACCTCGAG  580