BAC Information

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BAC

Clone NameB6Ng01-345G13
Chromosome13 (Build37)
Map Location 78,299,643 - 78,300,651
singlet/doubletsinglet
Overlap gene1110033M05Rik
Upstream gene2210408I21Rik, LOC675063, D13Mgi7, 1700013G10Rik
Downstream geneNr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052, EG666883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345G13.bB6Ng01-345G13.g
ACCGA127614GA127615
length1,010586
definitionB6Ng01-345G13.b B6Ng01-345G13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcagctggccagcttaccccaaggccaatgtaaagacctggtc
tcaaaaacaaaacaaaacaaaacaaagcaaatgagagtgcctgagaaaga
acccccaaggcccttctctgccttcacatgcacacacacaatcttgcata
cacatgaacacatgcacaatgaccacttccaaaacttaagaatttcttaa
attaaaaaagtttttggataatttcatacatgtacttccaaattttcata
catgagtgttttgttcacagcatttccacccatctttcctcccattccaa
ctccttccatgttacccccttatcctcaaattttgacttcttctttatta
ttgctgcatggatgtgtgtatagaggctgtcaagacatctagtactgctt
gaatgtacacatgcatgtatttgtgagtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtggaactgaataacttagcaagggcatgccccagtggaaga
cagatttttcaccctatttcagcagtcactaattgcctgtaactctatat
ctaagatgttatattttctaataaaattttatattacacttcagtgtata
atttaccaactttactttggaaagaattctttgttccctgccctaactcg
gttacctaatgtaggtaattcagctggcaacctgctttacttactgattg
tccctcttctgataaaagcataaaatctaattatttcatctttatttgca
agagtagatgctcagaacaactgcatgtacccagtttctcctttgcacaa
tggtcttttcagagcaagactgctcgtgcagagagttgtcataagccaaa
accaaaaagaatttttggagtgatttttatcattcaaggacatttgtcat
ccttcagaaagattgtcattaggctagtgggggataaaattgttgaagcc
tattgacccaaagtctctccaaagcatgactgaattcggttttaaggacc
aaaaggaact

gaattccagacgattaagacagggagatcactaaattcaaggtcatctgg
gattaaaggaatggtggcacacacctttaatctgggttccaccttctgct
ggacacctacataaggacattggaaaaaggaagattctctcttcttcttc
ttcttcttcttcttcttcttcttcttcttcttcttcttctttttcttctt
ctttttctttttcttcttctttggcttgccttgtgggactgagcaactgc
tagatccttggtcttccattcacagctgctgtttactatggttgggattt
ggactacagactgtaagtcatcaacaaattcccttactatatagagacta
cccataagttctgtgactctaaataaccctgactaatactctatgtactc
acttataagtggatattagccacaaagtacgtgataaccatgctccaaac
tacagattcaaagaacctaagtaacaaggaggatccaagagaggatcctt
gaatctcactcagaagggtaaataaaatagacattggaagtgaatggaaa
gagaaaactgggtggatagggggtgtggaggaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_78299643_78300651
seq2: B6Ng01-345G13.b_48_1057

seq1  GAATTCAGCAGCTGGCCAGCTTACCCCAAGGCCAATG-AAAGACCTGGTC  49
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATTCAGCAGCTGGCCAGCTTACCCCAAGGCCAATGTAAAGACCTGGTC  50

seq1  TCAAAAACAAAACAAAACAAAACAAAGCAAATGAGAGTGCCTGAGAAAGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACAAAACAAAACAAAACAAAGCAAATGAGAGTGCCTGAGAAAGA  100

seq1  ACCCCCAAGGCCCTTCTCTGCCTTCACATGCACACACACAATCTTGCATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAAGGCCCTTCTCTGCCTTCACATGCACACACACAATCTTGCATA  150

seq1  CACATGAACACATGCACAATGACCACTTCCAAAACTTAAGAATTTCTTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAACACATGCACAATGACCACTTCCAAAACTTAAGAATTTCTTAA  200

seq1  ATTAAAAAAGTTTTTGGATAATTTCATACATGTACTTCCAAATTTTCATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAAGTTTTTGGATAATTTCATACATGTACTTCCAAATTTTCATA  250

seq1  CATGAGTGTTTTGTTCACAGCATTTCCACCCATCTTTCCTCCCATTCCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTGTTTTGTTCACAGCATTTCCACCCATCTTTCCTCCCATTCCAA  300

seq1  CTCCTTCCATGTTACCCCCTTATCCTCAAATTTTGACTTCTTCTTTATTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCATGTTACCCCCTTATCCTCAAATTTTGACTTCTTCTTTATTA  350

seq1  TTGCTGCATGGATGTGTGTATAGAGGCTGTCAAGACATCTAGTACTGCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCATGGATGTGTGTATAGAGGCTGTCAAGACATCTAGTACTGCTT  400

seq1  GAATGTACACATGCATGTATTTGTGAGTGTGTGTGTGTGTGTGTGTGTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTACACATGCATGTATTTGTGAGTGTGTGTGTGTGTGTGTGTGTGT  450

seq1  GTGTGTGCTTGGAACTGAATAACTTAGCAAGGGCATGCCCCAGTGGAAGA  499
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGGAACTGAATAACTTAGCAAGGGCATGCCCCAGTGGAAGA  500

seq1  CAGATTTTTCACCCTATTTCAGCAGTCACTAATTGCCTGTAACTCTATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTTCACCCTATTTCAGCAGTCACTAATTGCCTGTAACTCTATAT  550

seq1  CTAAGATGTTATATTTTCTAATAAAATTTTATATTACACTTCAGTGTATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATGTTATATTTTCTAATAAAATTTTATATTACACTTCAGTGTATA  600

seq1  ATTTACCAACTTTACTTTGGAAAGAATTCTTTGTTCCCTGCCCTAACTCG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCAACTTTACTTTGGAAAGAATTCTTTGTTCCCTGCCCTAACTCG  650

seq1  GTTACCTAATGTAGGTAATTCAGCTGGCAACCTGCTTTACTTACTGATTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTAATGTAGGTAATTCAGCTGGCAACCTGCTTTACTTACTGATTG  700

seq1  TCCCTCTTCTGATAAAAGCATAAAATCTAATTATTTCATCTTTATTTGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTCTGATAAAAGCATAAAATCTAATTATTTCATCTTTATTTGCA  750

seq1  AGAGTAGATGCTCAGAACAACTGCATGTACCCAG-TTCTCCTTTGCACAA  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGAGTAGATGCTCAGAACAACTGCATGTACCCAGTTTCTCCTTTGCACAA  800

seq1  TGGTCTTTTCAGAGCAAGACTGCTCGTGCAGAGAGTTGTCATAAGCCAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTTCAGAGCAAGACTGCTCGTGCAGAGAGTTGTCATAAGCCAAA  850

seq1  ACCAAAAAGAA-TTTTGGAGTGATTTTTATCA-TCAAGGACATTTGTTCA  896
      ||||||||||| |||||||||||||||||||| ||||||||||||| |||
seq2  ACCAAAAAGAATTTTTGGAGTGATTTTTATCATTCAAGGACATTTG-TCA  899

seq1  TCCTTCAGAAAGATTGTCACTAGGGAAGTGGGGGATAAAATTGCTTGAGC  946
      ||||||||||||||||||| ||||  ||||||||||||||||| |  |||
seq2  TCCTTCAGAAAGATTGTCATTAGGCTAGTGGGGGATAAAATTGTTGAAGC  949

seq1  CCATTGACTCAAAGTCTCTCCAGAGTCATAGACTGAATTGGTTTTTAAGG  996
      | |||||| ||||||||||||| || ||| ||||||||| | ||||||||
seq2  CTATTGACCCAAAGTCTCTCCAAAG-CAT-GACTGAATTCGGTTTTAAGG  997

seq1  AGTAAGAGGAACT  1009
      |  || |||||||
seq2  ACCAAAAGGAACT  1010


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