BAC Information

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BAC

Clone NameB6Ng01-345K01
Chromosome13 (Build37)
Map Location 19,524,201 - 19,524,933
singlet/doubletsinglet
Overlap genenone
Upstream geneVps41, Amph, LOC624044, Tcrg-V4, LOC624071, Tcrg, Tcrg-C, Stard3nl
Downstream geneEpdr1, Sfrp4, Txndc3, A530099J19Rik, Gpr141, LOC432730, Elmo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345K01.bB6Ng01-345K01.g
ACCGA127764GA127765
length7331,161
definitionB6Ng01-345K01.b B6Ng01-345K01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatacatttataactaatgtatgtaggcaaagattctaaaagtt
tatcactagcttgtcgatcagtctctgtctccacccccatttttggtttg
gattcatcaaagccaattttgtacttctatcctctattttggcatgattt
aaggtacagggaggaatattcaacttgccttttttttttttcttttttag
tgttcctttgtttaaaaaattcagttgcctagaacttctcttccttcgtt
gcttgaggtggtcatgcagctggaaggttgtgggataaatcaaagcaagc
tgatatcctttctaaatcatgaaacatttacatttgactgatcagaaagc
ttctcttcctaaatgtcttcagctcttggttgagcagcagcatttggaaa
cagtaatttgtagattatctcattctatcagacagctcaattcaccttaa
ctatgttgagggattggaaagattaaaaactaggacttttaaaaacatca
cacttagaatacagcaatattctaaactatcaaagtaaaggacagggtag
ttcatggtggtattggttgaacttcactagcataggccaaaatgaaaagt
tgcttagatgggcgatgagcctcgcaggcaaatggatggaactagaaaat
atcatcctgtgtgagataacacaatcagccctacttagaagagggaacaa
aataattatgggaggtagagggtgggagggact
gaattcagatgggcatcagaacatcagaaagcctttgaaaatattaagga
ggccctgcagactgcgccagccttggcatttccagatctaaccaagccct
tcatcctctatgttgatgagaaggcaggggtggccagaggagttcttact
caggctctagggctgtagaagaggccggtgacatatttgtctaaaaagct
ggacccagacacaagtcccttccgctcgactcgagccccgggctaccttg
ccagcagagtcttgcccaacacccgcaagggcccacacgggaccccccac
gggatcctaagacctctggtgagtggaacacagcacctgccccaatccaa
tcgcgcggaaccagagactgcggtacatagggaagcaggctacccgggcc
tgatctggggcacaagtcccttccgctcgactcgagccccaggctacctt
gccagcagagtcttgcccaacacccgcaagggcccacacgggactcccca
cgggatcctaagacctctggtgagtggaacacagcgcctgccccaatcca
atcacacagaacctgagactccacacgagatcctaagacctctagtgagt
ggaacacaacttctgccaggagtctggttcgaacaccagatatctgggta
cctgccctgcaaggagagagcttacctgcagagaatactctgcccactga
aactaaggagagtgctaccctccaggtctgcttatagaggctaacagagt
cacctgaagaacaagctcttaacagtgacaactaaaacagctagcttcag
agattaccagatggcgaaaggcaaacgtaagaatcctactaacagaaatc
aagatcactcaccatcatcagaacgcagcactcccaccccacctagtcct
gggcaccccaacacaaccgaaaatctagacccaggatttaaaaaacattt
ctcatgatgatgatagaggacatcaaggaggactttcataagtcactaaa
ggattacaggagagcactgctaaggagtacaggccttaaagaaaaggcag
gaaaacacaggcaaacagggtagaactcatcaaggaaaaaacaggaaaac
cttcgaaccgggtcaatggactggacaaatcatacttgagaacctaaatg
ggggaaggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_19524201_19524933
seq2: B6Ng01-345K01.b_47_779 (reverse)

seq1  AGTCCCTCCCACCCTCTACCTCCCATAATTATTTTGTTCCCTCTTCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTCCCACCCTCTACCTCCCATAATTATTTTGTTCCCTCTTCTAAG  50

seq1  TAGGGCTGATTGTGTTATCTCACACAGGATGATATTTTCTAGTTCCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTGATTGTGTTATCTCACACAGGATGATATTTTCTAGTTCCATCC  100

seq1  ATTTGCCTGCGAGGCTCATCGCCCATCTAAGCAACTTTTCATTTTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTGCGAGGCTCATCGCCCATCTAAGCAACTTTTCATTTTGGCCT  150

seq1  ATGCTAGTGAAGTTCAACCAATACCACCATGAACTACCCTGTCCTTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGTGAAGTTCAACCAATACCACCATGAACTACCCTGTCCTTTACT  200

seq1  TTGATAGTTTAGAATATTGCTGTATTCTAAGTGTGATGTTTTTAAAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGTTTAGAATATTGCTGTATTCTAAGTGTGATGTTTTTAAAAGTC  250

seq1  CTAGTTTTTAATCTTTCCAATCCCTCAACATAGTTAAGGTGAATTGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTTAATCTTTCCAATCCCTCAACATAGTTAAGGTGAATTGAGCT  300

seq1  GTCTGATAGAATGAGATAATCTACAAATTACTGTTTCCAAATGCTGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATAGAATGAGATAATCTACAAATTACTGTTTCCAAATGCTGCTGC  350

seq1  TCAACCAAGAGCTGAAGACATTTAGGAAGAGAAGCTTTCTGATCAGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAAGAGCTGAAGACATTTAGGAAGAGAAGCTTTCTGATCAGTCAA  400

seq1  ATGTAAATGTTTCATGATTTAGAAAGGATATCAGCTTGCTTTGATTTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATGTTTCATGATTTAGAAAGGATATCAGCTTGCTTTGATTTATC  450

seq1  CCACAACCTTCCAGCTGCATGACCACCTCAAGCAACGAAGGAAGAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACCTTCCAGCTGCATGACCACCTCAAGCAACGAAGGAAGAGAAGT  500

seq1  TCTAGGCAACTGAATTTTTTAAACAAAGGAACACTAAAAAAGAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCAACTGAATTTTTTAAACAAAGGAACACTAAAAAAGAAAAAAAA  550

seq1  AAAAGGCAAGTTGAATATTCCTCCCTGTACCTTAAATCATGCCAAAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCAAGTTGAATATTCCTCCCTGTACCTTAAATCATGCCAAAATAG  600

seq1  AGGATAGAAGTACAAAATTGGCTTTGATGAATCCAAACCAAAAATGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGAAGTACAAAATTGGCTTTGATGAATCCAAACCAAAAATGGGGG  650

seq1  TGGAGACAGAGACTGATCGACAAGCTAGTGATAAACTTTTAGAATCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGAGACTGATCGACAAGCTAGTGATAAACTTTTAGAATCTTTG  700

seq1  CCTACATACATTAGTTATAAATGTATTGAATTC  733
      |||||||||||||||||||||||||||||||||
seq2  CCTACATACATTAGTTATAAATGTATTGAATTC  733