BAC Information

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BAC

Clone NameB6Ng01-345O13
Chromosome13 (Build37)
Map Location 59,527,214 - 59,527,841
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041086, Slc28a3, LOC100041510, LOC435361, Ntrk2, LOC100041533
Downstream geneAgtpbp1, Mak10, Golph2, 4921517D22Rik, 1700013B16Rik, EG238662, 4932411G14Rik, Isca1, Zcchc6, LOC100041267, Gas1, EG328264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345O13.bB6Ng01-345O13.g
ACCGA127959GA127960
length9941,194
definitionB6Ng01-345O13.b B6Ng01-345O13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccggtgcaaaagtctaatggaggaacagggtaaagacaaatct
cttaaggatgccaacatttgccagagcagtgactcagttgacatttaaga
cccaagcagcggatgagaaagaataaagcaaagcagacctcaggtcagaa
atatcacaacaaataaaggacaatcaatactgacgaaggaatcaacatag
caggaagatatagcaatcaaaacacactcactcagtatcagggcacataa
gcacataaagcaaatgatggctgagtggaagggagacctcggagagtctc
tttcaataacaggtaaaagagccaggtcaagatcagtgcgcgattaccca
caaggcacgggagactgggaagatggtgctgttacccaggaggcgcagga
gaacgacattctgcacgtgctggaaagatgggggatttcaccgccagcag
cagaatgcacgattctctccagctcacgtgggattgtctcatagataagc
taaatgttaaatcacaaaacaactcttaacaacttaagattacaatacga
ccaagcacttccctcagacacagggcaaggaaaaactcaaaggaatgtgg
gaagacatatagtatacagaaattaaacaatgtgccattgatgtcattgg
ccgagagaagaactaagaaggaagctacacacacacacacacacacacac
acttcaaccaatgaaaacaaaatacaggaaaccaaatctcgtgggaccca
gcacattcactgacaacaataaatgcccacatcgaagaggaagaaagatc
tcaaataaacaatctaattttccatctcaaagaactaaagaaagagaggg
aagctatggctgatgttagcagaaagcaggaaaataaacaaaacagaaaa
cagaccataaaaatagattaatgaagccaagagtgttttttttctttaaa
ttagcaaacacttggctagactaatttaggaaaagaaggcagaa
gaattctatttgtaggggaagaccccggcataacggagatgtcagtacaa
tgggatgagcaccaagaaccgcactggagtgaatcagcctgagcttagag
tactacagagggaagagctggaaaagtgacgacagccctttggaggagcc
cagcagatcatgtgtggatctcaggcattgaagctgtgacactgaagttg
ccttggagaccccaagatgttcgagatgccacagccacctgctgaggagg
gctgctaaaagggagtgaaaccagcccaggagaaagcagtttgctgcagg
caacacagatgaaaaaggagttggagatctgaagactgctgtgacatcag
tcgtagagatgcagagtatggagtttgcacagctggttcctgtcttgctt
ttaagtgactggatgaatctcagaagacactttcaactttagacttttaa
cattattgagactgctatagactatggggaatttgaagttggactaaatg
tattttccattatgctatgtttaggtatggcccccatagattcatgtgtt
tgaacaagcctatgggggacagggagtggaatattatggtttgtatatgc
tcggcccggaaagtggcactattagaaggagtaggtgtgtcactgtgggt
gtgggctataagatcctcatcctagctgcctggaatccagtcttctccta
gtggtcttcagatgaagatgaagaattctcagctcctcctgcactatgcc
tgcctggatgcttccatgttcccgctttgatgataatggacaaaccctct
gaacctgaaagccagccccaattaaatgttgttcttataagcgttgcctc
agtcatggtgtctggtcacagcagtaaaaccctaactaagacaatgttat
tctggcttacagggttacatccctatcacggagggaaggtcatggttagg
gaacttcaggcaggaacttggagggaatggaaagtctacagacaagtggg
aggggaggcgtccattcttactgggcttgctttcttgtcttactcagctt
acttatacagctcaggtcccactacctaggagatggacctgccttcagtg
aacttgggtcctcctgcatcaattagtagatctagcttgttccaggtgac
aaacttaaccagtcaaattctttatctgtgagaagtgtatagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_59527214_59527841
seq2: B6Ng01-345O13.b_49_676

seq1  GAATTCCCCGGTGCAAAAGTCTAATGGAGGAACAGGGTAAAGACAAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCGGTGCAAAAGTCTAATGGAGGAACAGGGTAAAGACAAATCT  50

seq1  CTTAAGGATGCCAACATTTGCCAGAGCAGTGACTCAGTTGACATTTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGATGCCAACATTTGCCAGAGCAGTGACTCAGTTGACATTTAAGA  100

seq1  CCCAAGCAGCGGATGAGAAAGAATAAAGCAAAGCAGACCTCAGGTCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCAGCGGATGAGAAAGAATAAAGCAAAGCAGACCTCAGGTCAGAA  150

seq1  ATATCACAACAAATAAAGGACAATCAATACTGACGAAGGAATCAACATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACAACAAATAAAGGACAATCAATACTGACGAAGGAATCAACATAG  200

seq1  CAGGAAGATATAGCAATCAAAACACACTCACTCAGTATCAGGGCACATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGATATAGCAATCAAAACACACTCACTCAGTATCAGGGCACATAA  250

seq1  GCACATAAAGCAAATGATGGCTGAGTGGAAGGGAGACCTCGGAGAGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAAGCAAATGATGGCTGAGTGGAAGGGAGACCTCGGAGAGTCTC  300

seq1  TTTCAATAACAGGTAAAAGAGCCAGGTCAAGATCAGTGCGCGATTACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAACAGGTAAAAGAGCCAGGTCAAGATCAGTGCGCGATTACCCA  350

seq1  CAAGGCACGGGAGACTGGGAAGATGGTGCTGTTACCCAGGAGGCGCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCACGGGAGACTGGGAAGATGGTGCTGTTACCCAGGAGGCGCAGGA  400

seq1  GAACGACATTCTGCACGTGCTGGAAAGATGGGGGATTTCACCGCCAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGACATTCTGCACGTGCTGGAAAGATGGGGGATTTCACCGCCAGCAG  450

seq1  CAGAATGCACGATTCTCTCCAGCTCACGTGGGATTGTCTCATAGATAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGCACGATTCTCTCCAGCTCACGTGGGATTGTCTCATAGATAAGC  500

seq1  TAAATGTTAAATCACAAAACAACTCTTAACAACTTAAGATTACAATACGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTAAATCACAAAACAACTCTTAACAACTTAAGATTACAATACGA  550

seq1  CCAAGCACTTCCCTCAGACACAGGGCAAGGAAAAACTCAAAGGAATGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCACTTCCCTCAGACACAGGGCAAGGAAAAACTCAAAGGAATGTGG  600

seq1  GAAGACATATAGTATACAGAAATTAAAC  628
      ||||||||||||||||||||||||||||
seq2  GAAGACATATAGTATACAGAAATTAAAC  628