BAC Information

Click to search

BAC

Clone NameB6Ng01-347F18
Chromosome13 (Build37)
Map Location 70,388,255 - 70,389,410
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10, EG620143, LOC100042291, 4930520P13Rik
Downstream geneEG633042, BC018507, EG620473, Adamts16, 8030423J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347F18.bB6Ng01-347F18.g
ACCGA128986GA128987
length1,1471,210
definitionB6Ng01-347F18.b B6Ng01-347F18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcctttgtgtcttgacagtgaccttaaaaggtcaagtgatggc
acaatcagggttaaccaactgaaataactggataactttgtttcttattt
cattttaactaagctattgtctctcctttcttgataagccaatattccag
cagctaaaggggctcagccttcttgtcttttgagtggagctagaggatga
agagtgctaatttttaagagagaattggacactgaaatgaatttgtgttt
agtgtagtcttttctagggcaaagaaagaaaacatcttggaatgcctgca
tgtaatagaaatggccctggaagtgatcagtgcacatgttaagtaaggga
ttgtcagtattctttctcttgtatctgcctcttggtcttcaagttacagc
ctgaagagtttgcaaaccaatgccctcaaggctacattcattcagtgtcc
tgtgcaggacacattttcttgatcatggactctacaagagccagagctac
ctctctgctcagactgtctgcacccatctaagatcaagattctcaacaga
cagcaatgttcaaaactgccctcactgcaacagttttaatatggaaacat
cagtacagcccatcacacataaactgtcacttaagctgagagacagagtt
aaatgtgggatattttgcaataaacatttatttccattgcatcttcaagc
aatacaaaaatgagcataaaccagtccggtcgaaaagctatctaaaacct
gtagcagactgctggaactttaaagcttttgatttgattgccttatcaga
gctgaggaagcacacacttagataaactcagaggcccttgcagccaccac
ccaagggttgcctactgctgcttttcacctggtgacagaagatggagtct
cccaagtggtgctggagatgcagagtgaagggttatggtgtcacaagagt
ctttcagctggattctagaagaaattgcttgtaaagtcgacaactgtagg
gaagctcggttccctacagaagcttcctacagtgttattacttagctgtg
agctgggacttaagtaaaatcagtcacctcggatattgaagatgcaggat
tgagcatcttctggaacagctagggcactcagaagatcgtatgcagg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaattgctaagatcataaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcagttcctca
gaaaattggacatagtactaccggagaatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggttacacattcacaaa
ggaactcacatgatatgtactcactgataagtagatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaattaagaatgaagtgtggacactatgcccctccttagaagggggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagaaactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgcgagactatgccgggacctagcaaac
acagaagtgggatgctcacagtcagctaatggatggatcacagggctctc
aatggaggagctagagaaagtacccaaggagctaaagggatctgcaaccc
tatagttgaataaacattatgaactaaccagtactccggagctcttgact
ctagctgcatatgtatcaaagatggcctagtcgcatcactgaaagagagg
ctcaatggacacgctaaactttatatgcctcagaacagggaacgctagct
aaggggatgggctggctagggaaagaatctactgcgtgaggtgatcctga
tcctgatact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_70388255_70389410
seq2: B6Ng01-347F18.b_53_1199

seq1  GAATTCAGCCTTTGTGTCTTGACAGTGACCTTAAAAGGTCAAGTGATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTTTGTGTCTTGACAGTGACCTTAAAAGGTCAAGTGATGGC  50

seq1  ACAATCAGGGTTAACCAACTGAAATAACTGGATAACTTTGTTTCTTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAGGGTTAACCAACTGAAATAACTGGATAACTTTGTTTCTTATTT  100

seq1  CATTTTAACTAAGCTATTGTCTCTCCTTTCTTGATAAGCCAATATTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAACTAAGCTATTGTCTCTCCTTTCTTGATAAGCCAATATTCCAG  150

seq1  CAGCTAAAGGGGCTCAGCCTTCTTGTCTTTTGAGTGGAGCTAGAGGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAAGGGGCTCAGCCTTCTTGTCTTTTGAGTGGAGCTAGAGGATGA  200

seq1  AGAGTGCTAATTTTTAAGAGAGAATTGGACACTGAAATGAATTTGTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCTAATTTTTAAGAGAGAATTGGACACTGAAATGAATTTGTGTTT  250

seq1  AGTGTAGTCTTTTCTAGGGCAAAGAAAGAAAACATCTTGGAATGCCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGTCTTTTCTAGGGCAAAGAAAGAAAACATCTTGGAATGCCTGCA  300

seq1  TGTAATAGAAATGGCCCTGGAAGTGATCAGTGCACATGTTAAGTAAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGAAATGGCCCTGGAAGTGATCAGTGCACATGTTAAGTAAGGGA  350

seq1  TTGTCAGTATTCTTTCTCTTGTATCTGCCTCTTGGTCTTCAAGTTACAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTATTCTTTCTCTTGTATCTGCCTCTTGGTCTTCAAGTTACAGC  400

seq1  CTGAAGAGTTTGCAAACCAATGCCCTCAAGGCTACATTCATTCAGTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGTTTGCAAACCAATGCCCTCAAGGCTACATTCATTCAGTGTCC  450

seq1  TGTGCAGGACACATTTTCTTGATCATGGACTCTACAAGAGCCAGAGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGGACACATTTTCTTGATCATGGACTCTACAAGAGCCAGAGCTAC  500

seq1  CTCTCTGCTCAGACTGTCTGCACCCATCTAAGATCAAGATTCTCAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGCTCAGACTGTCTGCACCCATCTAAGATCAAGATTCTCAACAGA  550

seq1  CAGCAATGTTCAAAACTGCCCTCACTGCAACAGTTTTAATATGGAAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATGTTCAAAACTGCCCTCACTGCAACAGTTTTAATATGGAAACAT  600

seq1  CAGTACAGCCCATCACACATAAACTGTCACTTAAGCTGAGAGACAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGCCCATCACACATAAACTGTCACTTAAGCTGAGAGACAGAGTT  650

seq1  AAATGTGGGATATTTTGCAATAAACATTTATTTCCATTGCATCTTCAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGGGATATTTTGCAATAAACATTTATTTCCATTGCATCTTCAAGC  700

seq1  AATACAAAAATGAGCATAAACCAGTCCGGTCGAAAAGCTATCTAAAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAAAATGAGCATAAACCAGTCCGGTCGAAAAGCTATCTAAAACCT  750

seq1  GTAGCAGACTGCTGGAACTTTAAAGCTTTTGATTTGATTGCCTTATCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGACTGCTGGAACTTTAAAGCTTTTGATTTGATTGCCTTATCAGA  800

seq1  GCTGAGGAAGCACACACTTAGATAAACTCAGAGGCCCTTGCAGCCACCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGAAGCACACACTTAGATAAACTCAGAGGCCCTTGCAGCCACCAC  850

seq1  CCAAGGGTTGCCTACTGCTGCTTTTCACCTGGTGACAGAAGATGGAGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGTTGCCTACTGCTGCTTTTCACCTGGTGACAGAAGATGGAGTCT  900

seq1  CCCAAGTGGTGCTGGAGATGCAGAGTGAAGGGTTATGGTGTCACAAGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGGTGCTGGAGATGCAGAGTGAAGGGTTATGGTGTCACAAGAGT  950

seq1  CTTTCAGCTGGATTCTAG-AGAAA-TGCTTGTAAAGTCGGACAACTGTAG  998
      |||||||||||||||||| ||||| ||||||||||||| |||||||||||
seq2  CTTTCAGCTGGATTCTAGAAGAAATTGCTTGTAAAGTC-GACAACTGTAG  999

seq1  GGAAGCTCGGTTCCCTACAGAAAGCTCCTAACAGTGTTA-TACTTAAGGC  1047
      |||||||||||||||||||| ||||| |  ||||||||| ||||||  ||
seq2  GGAAGCTCGGTTCCCTACAG-AAGCTTCCTACAGTGTTATTACTTA--GC  1046

seq1  TGTGAGGCTGGGACCTAAGTTAAAATCAGTCACTCGGGATATTGAAGATG  1097
      ||||| |||||||| |||| |||||||||||||   ||||||||||||||
seq2  TGTGA-GCTGGGACTTAAG-TAAAATCAGTCACCTCGGATATTGAAGATG  1094

seq1  CAGAGATATGAGCAATCTTCTGAGACAAGCTAGGGGCACCAAGAAGAACC  1147
      ||| ||| ||||| |||||||| ||  ||||| ||||||  ||||| | |
seq2  CAG-GAT-TGAGC-ATCTTCTG-GAACAGCTA-GGGCACTCAGAAG-ATC  1138

seq1  GTATGCAGG  1156
      |||||||||
seq2  GTATGCAGG  1147