BAC Information

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BAC

Clone NameB6Ng01-348B13
Chromosome13 (Build37)
Map Location 32,508,741 - 32,509,911
singlet/doubletsinglet
Overlap genenone
Upstream geneFoxq1, LOC100041312, Foxf2, Foxc1, 4930548F15Rik, Gmds, LOC666212
Downstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348B13.bB6Ng01-348B13.g
ACCGA129495GA129496
length1,1681,163
definitionB6Ng01-348B13.b B6Ng01-348B13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtacaatctcacttgaagtaattgtttaaattatttatattc
tataccttttccatcccacacttatgttgtcatttatggagtatcaggcc
ttattctacatgcagaaggacaaggtctctagaaacaaaatgaacaaaac
tttaaaatgctatcatgttatagacatgcccagaggtcagagtgtaggaa
ccacgttctattttctgataaccaagaacaaagattccccatcccagtgt
gcagccctttgccatgttgcaggaggatatggatggcagcttcatagact
agagtttatagtcatgggcagccaaacagagctacccagcctaatctagt
agttgcaccttagggacataatggtacccactgcttgttatcctgagctt
ctacccatcctccaagctccaagttcattaatgggaaacatggcagagac
ttgtaactctccctgtaagcagaaggataaatctaccttgcattctgtgc
cagctcctttgcttgcaaacggtattctctccataccctcacatggtctt
ccctctgcctgtgactaagtgctgtctcctcttcatataagaacaaaaat
cctattggattagggcccattctcacagcttcatcatagtttggtttttt
ttctgtaaagatcctgtctccaaatatgaccacatatgaatttggcaggc
tatcacaacccagcctttgatggggagaacgagcagaagtatatcattca
accagtgagtctctatcctgcacagatggggaacaggccagcagataaac
acccaatccagcagcttattggaaaaggcactggcttggggttcatcagc
tttgacttccctctgcctttctctgttgtcaaaggtgggagctcagagcc
atggagtgacagtagcaatggagtagggcacccactccacatgctatgcc
aataagcaaacccagagatggcagcaaccaagtagactctgaagccaagg
gaaggacaaggaacatgcttctggtgactcagtaagtcagtcattactcc
cttcatttcataaggagaagaataagtggaacattttatttagtgctttc
ttcatattttcatagagatgaatcaattcatgttacaaaaaagaatgtaa
actgattgcattggattg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcacatcagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaactactctggaaatcagtctggcagttcctca
gaaaattggacatagtactactggaggatcccacaatacctctcctgaat
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagtagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcattctgagtgaggtaactcaatcacaaa
agaactcaaatgatatgtactcacttttaagtggatattagcccagaaac
ttaggatacaagatataagatacaatttgctaaacgcatgaaactcaaaa
agaaggaagaccaaagtgtggacactttgccccttcttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgtgacaaa
aggatggaccatctagagactgcaatatccggggatccatcccataatca
gcttccaaaagctgacaccattgtatacactagcaagattttgctgaaag
gacccagatatagctgtctcttgtgagactatgccagggcctagcaaaca
cagaagtggatgctcacattcagctatggatggatcacagggccccaata
gagagctagagaaagtagccaaggagctaaagggatctgcaccctatagt
gaacaacatatgactacaagtactcctgagctcttgactctagcagcata
tgtatcaaaagatgccctagtcggcaatcactgaaagaagagtcaagtga
acttgcatcatcaattgcctcagttacatgggatcgctcaggttctaaaa
aatagtgggcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_32508741_32509911
seq2: B6Ng01-348B13.b_49_1216 (reverse)

seq1  CAATCCCATGC-ATCAGTTTTACTATCCTTTTTTTGTACATGAAATTGAT  49
      |||||| |||| ||||| ||||| || |||||||   ||||| |||||||
seq2  CAATCCAATGCAATCAG-TTTAC-ATTCTTTTTTGTAACATG-AATTGAT  47

seq1  TCATTCTTTCTATG-AAATATG-AGAAAGCACTTAATAAAATGTTCCACT  97
      |||   | |||||| ||||||| |||||||||| ||||||||||||||||
seq2  TCA---TCTCTATGAAAATATGAAGAAAGCACTAAATAAAATGTTCCACT  94

seq1  TAATTCTCT-CTTATGAAATTGGAGGG-GTAATGACTGACTTACTGAGTC  145
      || |  ||| ||||||||| || |||| ||||||||||||||||||||||
seq2  TATTCTTCTCCTTATGAAA-TGAAGGGAGTAATGACTGACTTACTGAGTC  143

seq1  A-CAGGAGCATGTTCCTTGTCCTTCCCTTGGCTTCAGAGTCTACTTTGGT  194
      | ||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  ACCAGAAGCATGTTCCTTGTCCTTCCCTTGGCTTCAGAGTCTAC-TTGGT  192

seq1  TGCTGCCATCTCTGGGTTTGCTTTATTGGCATAGCATGTGGAGTGGGTGC  244
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGCTGCCATCTCTGGGTTTGC-TTATTGGCATAGCATGTGGAGTGGGTGC  241

seq1  CCTACTCCATTGCTACTGTCACTCCATGGCTCTGAGCTCCCACCTTTGAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTCCATTGCTACTGTCACTCCATGGCTCTGAGCTCCCACCTTTGAC  291

seq1  AACAGAGAAAGGCAGAGGGAAGTCAAAGCTGATGAACCCCAAGCCAGTGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGAAAGGCAGAGGGAAGTCAAAGCTGATGAACCCCAAGCCAGTGC  341

seq1  CTTTTCCAATAAGCTGCTGGATTGGGTGTTTATCTGCTGGCCTGTTCCCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAATAAGCTGCTGGATTGGGTGTTTATCTGCTGGCCTGTTCCCC  391

seq1  ATCTGTGCAGGATAGAGACTCACTGGTTGAATGATATACTTCTGCTCGTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGCAGGATAGAGACTCACTGGTTGAATGATATACTTCTGCTCGTT  441

seq1  CTCCCCATCAAAGGCTGGGTTGTGATAGCCTGCCAAATTCATATGTGGTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCATCAAAGGCTGGGTTGTGATAGCCTGCCAAATTCATATGTGGTC  491

seq1  ATATTTGGAGACAGGATCTTTACAGAAAAAAAACCAAACTATGATGAAGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGAGACAGGATCTTTACAGAAAAAAAACCAAACTATGATGAAGC  541

seq1  TGTGAGAATGGGCCCTAATCCAATAGGATTTTTGTTCTTATATGAAGAGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAATGGGCCCTAATCCAATAGGATTTTTGTTCTTATATGAAGAGG  591

seq1  AGACAGCACTTAGTCACAGGCAGAGGGAAGACCATGTGAGGGTATGGAGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCACTTAGTCACAGGCAGAGGGAAGACCATGTGAGGGTATGGAGA  641

seq1  GAATACCGTTTGCAAGCAAAGGAGCTGGCACAGAATGCAAGGTAGATTTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCGTTTGCAAGCAAAGGAGCTGGCACAGAATGCAAGGTAGATTTA  691

seq1  TCCTTCTGCTTACAGGGAGAGTTACAAGTCTCTGCCATGTTTCCCATTAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGCTTACAGGGAGAGTTACAAGTCTCTGCCATGTTTCCCATTAA  741

seq1  TGAACTTGGAGCTTGGAGGATGGGTAGAAGCTCAGGATAACAAGCAGTGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTGGAGCTTGGAGGATGGGTAGAAGCTCAGGATAACAAGCAGTGG  791

seq1  GTACCATTATGTCCCTAAGGTGCAACTACTAGATTAGGCTGGGTAGCTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATTATGTCCCTAAGGTGCAACTACTAGATTAGGCTGGGTAGCTCT  841

seq1  GTTTGGCTGCCCATGACTATAAACTCTAGTCTATGAAGCTGCCATCCATA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTGCCCATGACTATAAACTCTAGTCTATGAAGCTGCCATCCATA  891

seq1  TCCTCCTGCAACATGGCAAAGGGCTGCACACTGGGATGGGGAATCTTTGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCAACATGGCAAAGGGCTGCACACTGGGATGGGGAATCTTTGT  941

seq1  TCTTGGTTATCAGAAAATAGAACGTGGTTCCTACACTCTGACCTCTGGGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTATCAGAAAATAGAACGTGGTTCCTACACTCTGACCTCTGGGC  991

seq1  ATGTCTATAACATGATAGCATTTTAAAGTTTTGTTCATTTTGTTTCTAGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTATAACATGATAGCATTTTAAAGTTTTGTTCATTTTGTTTCTAGA  1041

seq1  GACCTTGTCCTTCTGCATGTAGAATAAGGCCTGATACTCCATAAATGACA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGTCCTTCTGCATGTAGAATAAGGCCTGATACTCCATAAATGACA  1091

seq1  ACATAAGTGTGGGATGGAAAAGGTATAGAATATAAATAATTTAAACAATT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTGTGGGATGGAAAAGGTATAGAATATAAATAATTTAAACAATT  1141

seq1  ACTTCAAGTGAGATTGTACCTGAATTC  1171
      |||||||||||||||||||||||||||
seq2  ACTTCAAGTGAGATTGTACCTGAATTC  1168