BAC Information

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BAC

Clone NameB6Ng01-348I16
Chromosome13 (Build37)
Map Location 88,354,606 - 88,355,136
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675707
Downstream geneLOC667230, EG435375, Edil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348I16.bB6Ng01-348I16.g
ACCGA129806GA129807
length833500
definitionB6Ng01-348I16.b B6Ng01-348I16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcgggatttttaagccatattatggtatttgtttcttgttctt
gttcttgttcttgttcttgttcttgttcttgttcttgttcttgttcttgt
tcttgttcttgttcttgttcttgttcttgttcttgttcttgttcttgttc
ttgttcttgttcttgttcttgttcttctcttctcttctcttctcttctct
tctcttctcttctcttttcttttcttttcttttcttttcttttcttttct
tttcttttcttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatg
cgtgcttcaaagtgacaactttttccagtaattttggaagcagtttcttt
tgtcaaatttggcaactatgtaaagaatatgtaaattcttcatagcacat
ctaacttcgtcaatgggaataatttcttggtggttaaatatactttttcg
atgactatacctatagcaaatgactttctgactgtacttagagagatcct
ttccttgtagttcaatgtccttgatggcagtacaatattcagaacattct
gtttgttctttcactcacaaatttaatgactttttaaaaaactctccact
aagcatcttggattagtgtgtcctatattttgcactttattgttcaataa
caagaacacatgcaattttttccttgcctaattttgttgaaaaatatgtc
atgtaattgttaagcaaccttaggttttatactttctgtcatttctaaag
gaaaagttttgaaattttcatcaagactagcatattatagcttctctttg
actcataagaactgccaggatcattattactgt
gaattcatgaaattcttaggcaaatggatgcatcctgagtaaggtaacct
aatcacaaaaaaacccacacatgatatgaactcattgataagtggatatt
agccaagaaacttagaatatataagataaaatttgctaaacagaagaaac
tcaagaagaagcaagatcaatgtgtggatactttgctctttcttagaatg
gggaacaaaacacgcatagaaggagttacagagacaaagtttggagctga
aatttaaggaaggaccattcagagactgtcccacgatccatctcatatac
aaccaccaaaacatagacactattgcatatgccaaaaagattttgctggc
aggaccataacatagctctctcttgtgaggctatgccaatgcctggaaaa
tacagaagtggatggtcacagtcatctattggatggaacacagagctccc
aatgaaggagctggagaaagtacccaaggagctaaaggggtctgcaaccc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_88354606_88355136
seq2: B6Ng01-348I16.b_43_573 (reverse)

seq1  ACTGCCATCAAGGACATTGAACTACAAGGAAAGGATCTCTCTAAGTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCATCAAGGACATTGAACTACAAGGAAAGGATCTCTCTAAGTACAG  50

seq1  TCAGAAAGTCATTTGCTATAGGTATAGTCATCGAAAAAGTATATTTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGTCATTTGCTATAGGTATAGTCATCGAAAAAGTATATTTAACC  100

seq1  ACCAAGAAATTATTCCCATTGACGAAGTTAGATGTGCTATGAAGAATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAAATTATTCCCATTGACGAAGTTAGATGTGCTATGAAGAATTTA  150

seq1  CATATTCTTTACATAGTTGCCAAATTTGACAAAAGAAACTGCTTCCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTTTACATAGTTGCCAAATTTGACAAAAGAAACTGCTTCCAAAA  200

seq1  TTACTGGAAAAAGTTGTCACTTTGAAGCACGCATGCACACACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGAAAAAGTTGTCACTTTGAAGCACGCATGCACACACACACACAC  250

seq1  ACACACACACACACACACAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA  300

seq1  AAGAAAAGAAAAGAAAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGAAAAGAAAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG  350

seq1  AAGAGAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAG  400

seq1  AACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAA  450

seq1  CAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAAACAAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACAAGAACAAGAACAAGAACAAGAACAAGAACAAGAAACAAATAC  500

seq1  CATAATATGGCTTAAAAATCCCGAAGAATTC  531
      |||||||||||||||||||||||||||||||
seq2  CATAATATGGCTTAAAAATCCCGAAGAATTC  531