MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-349H18
Chromosome	13 (Build37)
Map Location	91,951,747 - 91,952,909
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG435376, Rps23, Atg10, LOC100042959, Ssbp2, LOC666889, Acot12, Zcchc9
Downstream gene	Ckmt2, Rasgrf2, Rasgrf2
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG435376 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435376 MGI:3648665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins

name	Rps23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66475 MGI:1913725
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 1149 ESTs, 6 Proteins

name	Atg10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66795 MGI:1914045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042959 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 639 ESTs, 12 Proteins

name	Ssbp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66970 MGI:1914220
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666889 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666889
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	Acot12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74156 MGI:1921406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zcchc9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69085 MGI:1916335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ckmt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76722 MGI:1923972
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rasgrf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19418 MGI:109137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rasgrf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19418 MGI:109137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435376 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395354 GeneID:435376 MGI:3648665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins product : predicted gene, EG435376 transcript_id : XM_487300.4

name	Rps23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803127 GeneID:66475 MGI:1913725
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 1149 ESTs, 6 Proteins product : ribosomal protein S23 transcript_id : NM_024175.2

name	Atg10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158678 GeneID:66795 MGI:1914045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : autophagy-related 10 (yeast) transcript_id : NM_025770.3

name	LOC100042959 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264393 GeneID:100042959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 639 ESTs, 12 Proteins product : similar to heterogeneous nuclear ribonucleoprotein K transcript_id : XM_001479178.1

name	Ssbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801982 GeneID:66970 MGI:1914220
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-stranded DNA binding protein 2 transcript_id : NM_024186.2

name	Ssbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367171 GeneID:66970 MGI:1914220
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-stranded DNA binding protein 2 transcript_id : NM_024272.3

name	Acot12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348782 GeneID:74156 MGI:1921406
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA thioesterase 12 transcript_id : NM_028790.2

name	Zcchc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647246 GeneID:69085 MGI:1916335
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, CCHC domain containing 9 transcript_id : NM_145453.2

name	Ckmt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377379 GeneID:76722 MGI:1923972
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : creatine kinase, mitochondrial 2 transcript_id : NM_198415.2

name	Rasgrf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7242198 GeneID:19418 MGI:109137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS protein-specific guanine nucleotide-releasing factor 2 transcript_id : NM_009027.2

name	Rasgrf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7242198 GeneID:19418 MGI:109137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS protein-specific guanine nucleotide-releasing factor 2 transcript_id : NM_009027.2

name	EG435376 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63652501 GeneID:435376 MGI:3648665
definition	codon_start : 1 product : hypothetical protein protein_id : XP_487300.2

name	Rps23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195604 CCDS:CCDS26674.1 GeneID:66475 MGI:1913725
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0015935 - small ribosomal subunit [Evidence IEA] GO_function : GO:0045182 - translation regulator activity [Evidence ISS] GO_process : GO:0043037 - translation [Evidence ISS] codon_start : 1 product : ribosomal protein S23 protein_id : NP_077137.1

name	Atg10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158679 CCDS:CCDS26675.1 GeneID:66795 MGI:1914045
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006914 - autophagy [Evidence IEA]; GO:0031401 - positive regulation of protein modification [Evidence IDA]; GO:0006497 - protein amino acid lipidation [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : autophagy 10-like product : autophagy-related 10-like protein_id : NP_080046.3

name	LOC100042959 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264394 GeneID:100042959
definition	codon_start : 1 product : similar to heterogeneous nuclear ribonucleoprotein K protein_id : XP_001479228.1

name	Ssbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56785420 CCDS:CCDS26677.1 GeneID:66970 MGI:1914220
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003697 - single-stranded DNA binding [Evidence IEA] [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : single-stranded DNA binding protein 2 isoform 2 protein_id : NP_077234.2

name	Ssbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18859589 CCDS:CCDS26676.1 GeneID:66970 MGI:1914220
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003697 - single-stranded DNA binding [Evidence IEA] [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : single-stranded DNA binding protein 2 isoform 1 protein_id : NP_077148.1

name	Acot12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18482377 CCDS:CCDS26678.1 GeneID:74156 MGI:1921406
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] GO_function : GO:0003986 - acetyl-CoA hydrolase activity [Evidence IDA]; GO:0005524 - ATP binding [Evidence IDA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] GO_process : GO:0006084 - acetyl-CoA metabolism [Evidence IDA]; GO:0006631 - fatty acid metabolism [Evidence TAS]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 product : cytosolic acetyl-CoA hydrolase protein_id : NP_083066.1

name	Zcchc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647247 GeneID:69085 MGI:1916335
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, CCHC domain containing 9 protein_id : NP_663428.2

name	Ckmt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38259206 CCDS:CCDS26679.1 GeneID:76722 MGI:1923972
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004111 - creatine kinase activity [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006603 - phosphocreatine metabolism [Evidence TAS] codon_start : 1 product : creatine kinase, mitochondrial 2 protein_id : NP_940807.1

name	Rasgrf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242199 GeneID:19418 MGI:109137
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : guanine nucleotide releasing factor product : RAS protein-specific guanine nucleotide-releasing factor 2 protein_id : NP_033053.2

name	Rasgrf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242199 GeneID:19418 MGI:109137
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : guanine nucleotide releasing factor product : RAS protein-specific guanine nucleotide-releasing factor 2 protein_id : NP_033053.2

name	LOC666889 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149264416 GeneID:666889
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to ribosomal protein L29 pseudo : _no_value transcript_id : XR_034312.1

clone name	MSMg01-111C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-419N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-349H18.b	B6Ng01-349H18.g
ACC	GA130462	GA130463
length	1,167	1,197
definition	B6Ng01-349H18.b	B6Ng01-349H18.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccaaagactgctgaaccagtaagtcaccaatcactgccctctgct atgccctagctggattcacggctacctgcgtttagaagtgggtacccggg tgaagagaaaactccagaaacctcttaatccacagggaatgggaaagtct aacgtcaagagtctcccacttttcttgccccacccccacacctttctgtt cactcttgttctctctctgtgtctctctgtgtgtctctgtctctctaact gaactctgtaaggtgtaaagaacaggtttggaggaccctttgttgtggca gctctatgttcctgtaaagaatcttaataagcccattaaaggagctggca atctttaaatcggcttgttccttctgtatttgaggtgaacagatgtttct cacacatttccctgggataaccttggaatataactttagggtatgattaa agtatattttgccagaggctcacaccatttgtcctcaccagtttctcttt acttaatactttgagacagagtctcttgctgaacttggagctcactagct gagaaagactagttgtctggcaaacctcacaaatctgccagtctctgcct ccttgctactggggttatagcaacccaccactagaatagaccttctacat gggtcctgggatcaaaatcaaagtccttaggtttatgtgaccagtgcttt atcaactgagccaccgctccagccctaaagttatgttttgttttgaagtt ttatttatttatttatttatttatttatttatttatttatttatttaggt ttttttttgagacagggtttctctgtatagccctggctatcctggaactc actttgtagaccaggctggcctcgaactcagaaatctgcctgcttctgcc tcccgagtgctgggattaaaggcgtgtgccaccaagcccggctctgaagt ttttatttttaaaccacaaaatatatgtatttaatgcataaacttccctt attcatgttctggattttctgtttgagtggttttggttgttgccttttct ttattttgttgttttgttttgtgacagtgtctctctatgtaggccaggct ggactcaacttgctgtcttccagcctcctatcttacacgttgctagatta cagccaccatgcctcag	gaattctcacctgaggaataccgaagggctgagaagcacctgaaaaaatg ttcagcatccttaaccatcagggaaatgaaaatcaaaacagccctgagat tccatctcacaccagtcagaatgactaagatcaaaaattcatgtgacagc agatgctggcaaggatgtggagaaagaggaacactcctccattgctggtg ggattgcaagcttgtacaaccactctggaaatcagtatggtggttcctca gaaaattggacatagtactaacagaggatcccgcaatacctctcctgggc atatatccagaagatgttccaactagtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaagaatggatacagaaaatgtggtacatttacacaatg gagtactactcggctattaaaaagaatgaatttatgaaattcctaggcaa atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa agaactcacatgatatgtactcactgataagtggatattagcccagatac ttagaatacccaagatacaagatacaaagcaacatgaaactcaagaagaa cgaaggccaaagtgtggacactttgccccttcttagaattgggaacaaaa cacccatggaaggagttacagagacaaagtttggagctgagacaaaagga tggaccatctagagactgccatatccggggatccatcccataatcagcct ccaaaagcagacaccattgcatacactagcaagattttgctgaaaggacc ctgatatagctgtctcttgtgagactatgccagggcctagcaaacacaga agtggatgctcaacagtcagctattggatggatcacagggcccccaatgg aggagctagagaaagtaccaaggagctaaagggatctgcaacctatatgt gacacatatgactaccagtacccgggagctcttgacttctagctgcattt tgtatcagaagatgggcctagtcagcatcagtggttaagagaagaaccat gtccgtgcaactttatatgccccagttacaggaaccagaccaggaactgg catggcgctgcaaggaatgtccgacgtctgacttgctggttacggac
quality values	Open. Hide. 58 31 23 38 62 51 41 20 47 56 56 54 51 47 62 62 62 62 44 62 62 47 32 62 62 62 62 62 62 59 26 34 43 19 23 27 21 23 23 25 54 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 59 59 59 62 62 62 59 62 62 62 62 62 59 56 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 54 58 42 58 45 58 58 58 58 58 58 58 58 49 52 58 58 58 58 58 58 58 58 52 52 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 45 51 54 58 58 58 58 58 54 54 54 54 54 58 58 58 54 58 58 46 46 46 54 52 58 58 58 46 58 46 49 58 53 53 41 51 49 58 51 51 52 58 50 58 58 58 58 53 54 58 49 58 58 58 49 40 42 29 58 58 50 49 53 53 58 58 53 53 50 58 53 58 51 49 39 37 58 53 42 35 44 41 47 54 39 38 32 51 33 58 39 35 58 49 52 50 50 37 50 51 54 54 58 39 49 48 31 42 49 50 50 51 50 50 37 50 53 58 58 53 42 58 50 31 23 41 39 35 41 46 49 58 39 53 24 58 58 58 52 42 36 37 51 58 58 25 46 28 49 50 51 41 54 37 54 39 54 46 44 34 54 37 44 40 54 54 54 49 54 40 44 40 54 46 44 39 54 49 54 33 54 32 51 39 54 37 54 37 54 44 34 17 20 13 54 54 54 54 54 54 54 37 39 37 28 53 29 38 45 54 47 37 54 33 42 40 37 41 44 37 34 42 32 25 37 53 33 31 34 30 32 36 34 40 21 41 33 31 32 34 15 29 32 32 31 29 46 49 29 52 28 45 22 37 19 24 24 6 23 25 37 35 42 28 31 31 31 32 42 38 26 43 35 32 19 33 51 31 31 34 36 42 31 32 31 31 31 31 38 31 24 29 29 31 39 32 51 43 24 42 24 19 42 24 30 25 46 41 31 26 23 16 46 25 16 28 24 20 31 27 16 32 31 38 24 30 31 8 41 25 19 48 12 10 34 22 32 18 7 16 32 31 29 37 48 41 41 9 11 12 46 41 46 15 14 48 14 14 5 10 12 20 41 48 27 21 31 30 30 31 33 25 32 32 48 32 22 35 27 33 22 27 29 32 48 31 37 22 34 25 48 31 11 21 30 22 21 34 21 14 37 16 32 31 29 24 18 36 32 44 48 16 15 21 37 10 48 29 21 34 21 18 34 32 22 43 47 21 25 18 14 13 7 9 8 20 17 28 29 48 48 27 14 13 40 26 6 6 36 30 18 5 4 9 9 6 25 34 6 6 4 12 27 9 7 5 15 28 20 20 20 20 18 11 27 19 11 5 6 7 8 6 13 6 27 7 4 25 22 28 9 15 8 18 21 13 9 14 28 27 20 25 10 11 11 14 25 5 4 4 7 13 14 10 23 11 6 25 10 14 6 5 8 16 20 16 6 5 4 6 9 23 5 4 4 8 11 17 19 3 1 4 8 3 3 4 4 3 4 4 9 22 4 4 8 7 12 14 16 16 3	Open. Hide. 62 59 43 59 62 62 62 46 59 43 41 36 28 22 11 25 23 21 21 23 43 54 56 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 54 62 62 62 59 59 59 62 54 59 62 54 49 54 54 49 49 54 54 59 59 62 59 62 62 59 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 54 54 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 54 54 58 58 58 58 58 58 58 58 58 54 58 58 58 49 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 52 58 58 54 58 58 58 58 58 58 58 58 48 58 58 58 54 58 58 58 58 58 54 54 58 58 58 54 53 54 51 58 54 58 58 58 58 50 58 58 58 51 50 47 58 49 58 58 58 47 33 49 46 46 46 47 54 58 51 47 50 58 53 52 58 58 58 53 52 58 50 50 50 46 58 48 52 58 54 58 46 51 51 49 58 58 58 39 53 54 43 41 50 51 53 49 41 54 48 49 51 48 44 50 51 58 45 50 58 35 58 46 40 58 58 50 40 58 52 26 46 24 47 35 58 51 41 47 51 50 58 51 47 39 36 50 50 58 49 49 50 44 35 39 49 47 40 35 41 42 37 50 40 45 46 54 54 32 29 36 38 29 28 28 38 41 52 35 49 44 47 45 53 54 50 50 37 54 44 32 54 52 42 38 42 45 54 31 45 31 14 54 29 27 47 54 51 35 36 46 31 40 52 37 51 26 31 26 51 54 54 42 30 54 31 34 45 53 31 16 38 32 52 52 42 26 32 52 32 22 26 36 45 18 38 30 53 32 34 15 51 32 53 47 41 26 20 28 37 26 39 23 40 25 29 42 29 32 31 32 35 38 32 31 33 19 32 31 46 46 35 31 42 40 23 31 27 26 29 37 31 42 24 33 31 33 31 28 31 15 20 30 42 24 33 24 33 30 29 15 48 46 35 31 31 41 21 31 48 37 26 32 27 14 31 22 24 27 27 26 28 31 26 30 29 43 33 34 43 36 31 26 29 38 26 28 35 19 32 18 42 31 31 29 17 29 20 32 46 31 19 24 31 30 27 31 31 41 29 13 17 21 18 21 35 37 28 32 32 31 18 20 34 31 31 10 6 6 13 23 22 26 42 33 34 38 34 27 31 33 24 24 7 13 28 33 10 29 22 19 9 7 18 37 23 18 38 27 38 16 10 22 21 25 24 9 14 11 31 17 32 19 10 16 19 7 25 34 33 18 33 28 30 20 7 23 9 21 10 15 31 33 12 43 12 25 48 30 21 24 24 21 34 23 17 12 28 31 15 11 11 11 28 19 9 3 3 5 27 8 21 9 16 28 15 27 13 24 20 12 12 20 28 16 24 20 28 19 7 22 7 21 10 26 16 10 5 11 28 20 19 10 6 6 11 7 5 13 28 27 27 8 14 7 5 6 8 6 14 27 20 21 6 21 15 12 23 10 15 25 11 8 13 8 17 6 10 17 10 6 5 6 15 16 21 6 4 14 16 4 7 23 9 4 5 6 4 6 5 8 16 15 15 3 3 3 2 5 13 10 5 6 9 15 11 11 15 5 6 4 7 16 20 18 12 28 30 24 7 14 7 4 4 6 6 7 7 2 3 5 3 3 3 2 4 7 5 3 1 1 4 1 1 5 14 3 3 3 10 16 5 19 7 4 4 6 17 6 10 3 7 4 8 6 5 1 1 3 4 4 8 5 6 3 11 7 5 4 3 1 4 6 4 7 10 6 3 2 1 2 6 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_91951747_91952909
seq2: B6Ng01-349H18.b_48_1214 (reverse)

seq1  CTGA-GCATGGT-GCTGTAATACTAGC-ACGTGTAAGATA-GAGGCTGGA  46
      |||| ||||||| |||||||| ||||| |||||||||||| |||||||||
seq2  CTGAGGCATGGTGGCTGTAAT-CTAGCAACGTGTAAGATAGGAGGCTGGA  49

seq1  AGACAGCAAGTTTGAGTCCAGCCTGGGCTACATAGAGAGACACTGTCACA  96
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  AGACAGCAAG-TTGAGTCCAGCCTGGCCTACATAGAGAGACACTGTCACA  98

seq1  AAACAAAACAAACAAAATAAAAGAAAAGGCAACAACCAAAACCACTCAAA  146
      ||||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  AAACAAAAC-AACAAAAT-AAAGAAAAGGCAACAACCAAAACCACTCAAA  146

seq1  CAGAAAATCCAGAACATGAATAAGGGAAGTTTATGCATTAAATACATATA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATCCAGAACATGAATAAGGGAAGTTTATGCATTAAATACATATA  196

seq1  TTTTGT-GTTTAAAA--TAAAACTTCAGAGCCGGGCTTGGTGGCACACGC  243
      |||||| ||||||||   ||||||||||||||||||||||||||||||||
seq2  TTTTGTGGTTTAAAAATAAAAACTTCAGAGCCGGGCTTGGTGGCACACGC  246

seq1  CTTTAATCCCAGCACTCGGGAGGCAGAAGCAGGCAGATTTCTGAGTTCGA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCCAGCACTCGGGAGGCAGAAGCAGGCAGATTTCTGAGTTCGA  296

seq1  GGCCAGCCTGGTCTACAAAGTGAGTTCCAGGATAGCCAGGGCTATACAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCTGGTCTACAAAGTGAGTTCCAGGATAGCCAGGGCTATACAGA  346

seq1  GAAACCCTGTCTC-AAAAAAAACCTAAATAAATAAATAAATAAATAAATA  392
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGTCTCAAAAAAAAACCTAAATAAATAAATAAATAAATAAATA  396

seq1  AATAAATAAATAAATAAATAAAACTTCAAAACAAAACATAACTTTAGGGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATAAATAAAACTTCAAAACAAAACATAACTTTAGGGC  446

seq1  TGGAGCGGTGGCTCAGTTGATAAAGCACTGGTCACATAAACCTAAGGACT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCGGTGGCTCAGTTGATAAAGCACTGGTCACATAAACCTAAGGACT  496

seq1  TTGATTTTGATCCCAGGACCCATGTAGAAGGTCTATTCTAGTGGTGGGTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGATCCCAGGACCCATGTAGAAGGTCTATTCTAGTGGTGGGTT  546

seq1  GCTATAACCCCAGTAGCAAGGAGGCAGAGACTGGCAGATTTGTGAGGTTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAACCCCAGTAGCAAGGAGGCAGAGACTGGCAGATTTGTGAGGTTT  596

seq1  GCCAGACAACTAGTCTTTCTCAGCTAGTGAGCTCCAAGTTCAGCAAGAGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACAACTAGTCTTTCTCAGCTAGTGAGCTCCAAGTTCAGCAAGAGA  646

seq1  CTCTGTCTCAAAGTATTAAGTAAAGAGAAACTGGTGAGGACAAATGGTGT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCAAAGTATTAAGTAAAGAGAAACTGGTGAGGACAAATGGTGT  696

seq1  GAGCCTCTGGCAAAATATACTTTAATCATACCCTAAAGTTATATTCCAAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCTGGCAAAATATACTTTAATCATACCCTAAAGTTATATTCCAAG  746

seq1  GTTATCCCAGGGAAATGTGTGAGAAACATCTGTTCACCTCAAATACAGAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCCAGGGAAATGTGTGAGAAACATCTGTTCACCTCAAATACAGAA  796

seq1  GGAACAAGCCGATTTAAAGATTGCCAGCTCCTTTAATGGGCTTATTAAGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAGCCGATTTAAAGATTGCCAGCTCCTTTAATGGGCTTATTAAGA  846

seq1  TTCTTTACAGGAACATAGAGCTGCCACAACAAAGGGTCCTCCAAACCTGT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACAGGAACATAGAGCTGCCACAACAAAGGGTCCTCCAAACCTGT  896

seq1  TCTTTACACCTTACAGAGTTCAGTTAGAGAGACAGAGACACACAGAGAGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACACCTTACAGAGTTCAGTTAGAGAGACAGAGACACACAGAGAGA  946

seq1  CACAGAGAGAGAACAAGAGTGAACAGAAAGGTGTGGGGGTGGGGCAAGAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAGAGAACAAGAGTGAACAGAAAGGTGTGGGGGTGGGGCAAGAA  996

seq1  AAGTGGGAGACTCTTGACGTTAGACTTTCCCATTCCCTGTGGATTAAGAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGAGACTCTTGACGTTAGACTTTCCCATTCCCTGTGGATTAAGAG  1046

seq1  GTTTCTGGAGTTTTCTCTTCACCCGGGTACCCACTTCTAAACGCAGGTAG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGGAGTTTTCTCTTCACCCGGGTACCCACTTCTAAACGCAGGTAG  1096

seq1  CCGTGAATCCAGCTAGGGCATAGCAGAGGGCAGTGATTGGTGACTTACTG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGAATCCAGCTAGGGCATAGCAGAGGGCAGTGATTGGTGACTTACTG  1146

seq1  GTTCAGCAGTCTTTGGAATTC  1163
      |||||||||||||||||||||
seq2  GTTCAGCAGTCTTTGGAATTC  1167

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information